RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 ZBTB7CA1YPR0 619 aa21.09■□□□□ 0.97
LMBR1-220ENST00000609081 SF3B2Q13435 895 aaKnown RBP21.09■□□□□ 0.97
LMBR1-220ENST00000609081 NME9Q86XW9 330 aa21.09■□□□□ 0.97
LMBR1-220ENST00000609081 WDR17Q8IZU2 1322 aa21.07■□□□□ 0.96
LMBR1-220ENST00000609081 USP35Q9P2H5 1018 aa21.07■□□□□ 0.96
LMBR1-220ENST00000609081 OVOS2A0A0J9YW53 1432 aa21.06■□□□□ 0.96
LMBR1-220ENST00000609081 OVOS2Q6IE36 1432 aa21.06■□□□□ 0.96
LMBR1-220ENST00000609081 SOX12O15370 315 aa21.05■□□□□ 0.96
LMBR1-220ENST00000609081 PARP4Q9UKK3 1724 aaKnown RBP21.04■□□□□ 0.96
LMBR1-220ENST00000609081 C11orf95C9JLR9 678 aaPredicted RBP21.04■□□□□ 0.96
LMBR1-220ENST00000609081 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
LMBR1-220ENST00000609081 CDCA7Q9BWT1 371 aaPredicted RBP21.04■□□□□ 0.96
LMBR1-220ENST00000609081 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
LMBR1-220ENST00000609081 LTN1O94822 1766 aa21.04■□□□□ 0.96
LMBR1-220ENST00000609081 RGPD5Q99666 1765 aa21.04■□□□□ 0.96
LMBR1-220ENST00000609081 EIF4G2P78344 907 aaKnown RBP eCLIP21.03■□□□□ 0.96
LMBR1-220ENST00000609081 PDE3BQ13370 1112 aa21.03■□□□□ 0.96
LMBR1-220ENST00000609081 ZRANB1Q9UGI0 708 aa21.03■□□□□ 0.96
LMBR1-220ENST00000609081 RGPD1P0DJD0 1748 aa21.03■□□□□ 0.96
LMBR1-220ENST00000609081 FAM196AQ6ZSG2 479 aa21.02■□□□□ 0.96
LMBR1-220ENST00000609081 COG3Q96JB2 828 aa21.02■□□□□ 0.96
LMBR1-220ENST00000609081 CARD10Q9BWT7 1032 aa21.01■□□□□ 0.95
LMBR1-220ENST00000609081 CSB-PGBD3P0DP91 1061 aa21■□□□□ 0.95
LMBR1-220ENST00000609081 WNK3Q9BYP7 1800 aa20.99■□□□□ 0.95
LMBR1-220ENST00000609081 MYOM1P52179 1685 aa20.99■□□□□ 0.95
LMBR1-220ENST00000609081 CCDC7Q96M83 1385 aa20.99■□□□□ 0.95
LMBR1-220ENST00000609081 BAG6P46379 1132 aa20.99■□□□□ 0.95
LMBR1-220ENST00000609081 ERBB3P21860 1342 aa20.97■□□□□ 0.95
LMBR1-220ENST00000609081 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
LMBR1-220ENST00000609081 KIF20BQ96Q89 1820 aa20.96■□□□□ 0.95
LMBR1-220ENST00000609081 FYB1O15117 783 aa20.95■□□□□ 0.94
LMBR1-220ENST00000609081 DDB1Q16531 1140 aa20.95■□□□□ 0.94
LMBR1-220ENST00000609081 FAM208AQ9UK61 1670 aaKnown RBP20.95■□□□□ 0.94
LMBR1-220ENST00000609081 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
LMBR1-220ENST00000609081 IP6K1Q92551 441 aa20.94■□□□□ 0.94
LMBR1-220ENST00000609081 TNS1Q9HBL0 1735 aaKnown RBP20.93■□□□□ 0.94
LMBR1-220ENST00000609081 HSPA5P11021 654 aaKnown RBP20.93■□□□□ 0.94
LMBR1-220ENST00000609081 FAM182BQ5T319 152 aa20.93■□□□□ 0.94
LMBR1-220ENST00000609081 DEFB132Q7Z7B7 95 aa20.93■□□□□ 0.94
LMBR1-220ENST00000609081 OVOS2A0A0G2JMS6 1433 aa20.93■□□□□ 0.94
LMBR1-220ENST00000609081 RTL1A6NKG5 1358 aa20.92■□□□□ 0.94
LMBR1-220ENST00000609081 ANKRD24Q8TF21 1146 aa20.91■□□□□ 0.94
LMBR1-220ENST00000609081 MAP3K19Q56UN5 1328 aa20.9■□□□□ 0.94
LMBR1-220ENST00000609081 BCL9O00512 1426 aa20.89■□□□□ 0.94
LMBR1-220ENST00000609081 NSD3Q9BZ95 1437 aa20.89■□□□□ 0.94
LMBR1-220ENST00000609081 KIF24Q5T7B8 1368 aa20.89■□□□□ 0.93
LMBR1-220ENST00000609081 PARD3Q8TEW0 1356 aa20.89■□□□□ 0.93
LMBR1-220ENST00000609081 TRIM37O94972 964 aa20.89■□□□□ 0.93
LMBR1-220ENST00000609081 AMPHP49418 695 aa20.89■□□□□ 0.93
LMBR1-220ENST00000609081 GGNBP2Q9H3C7 697 aa20.89■□□□□ 0.93
LMBR1-220ENST00000609081 NLRP2Q9NX02 1062 aa20.89■□□□□ 0.93
LMBR1-220ENST00000609081 PEAK1Q9H792 1746 aa20.89■□□□□ 0.93
LMBR1-220ENST00000609081 CGNL1Q0VF96 1302 aa20.88■□□□□ 0.93
LMBR1-220ENST00000609081 EXOC5O00471 708 aa20.88■□□□□ 0.93
LMBR1-220ENST00000609081 CARD14Q9BXL6 1004 aa20.88■□□□□ 0.93
LMBR1-220ENST00000609081 HOXC9P31274 260 aa20.87■□□□□ 0.93
LMBR1-220ENST00000609081 TNS2Q63HR2 1409 aa20.86■□□□□ 0.93
LMBR1-220ENST00000609081 SBF2Q86WG5 1849 aa20.85■□□□□ 0.93
LMBR1-220ENST00000609081 IL2RBP14784 551 aa20.85■□□□□ 0.93
LMBR1-220ENST00000609081 APBA3O96018 575 aa20.84■□□□□ 0.93
LMBR1-220ENST00000609081 EN1Q05925 392 aaPredicted RBP20.84■□□□□ 0.93
LMBR1-220ENST00000609081 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
LMBR1-220ENST00000609081 SMG6Q86US8 1419 aaKnown RBP20.84■□□□□ 0.93
LMBR1-220ENST00000609081 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
LMBR1-220ENST00000609081 FLT4P35916 1363 aa20.82■□□□□ 0.92
LMBR1-220ENST00000609081 RGPD3A6NKT7 1758 aaPredicted RBP20.82■□□□□ 0.92
LMBR1-220ENST00000609081 RGPD4Q7Z3J3 1758 aa20.82■□□□□ 0.92
LMBR1-220ENST00000609081 RRS1Q15050 365 aaKnown RBP20.81■□□□□ 0.92
LMBR1-220ENST00000609081 CAMKK2Q96RR4 588 aa20.81■□□□□ 0.92
LMBR1-220ENST00000609081 INSRP06213 1382 aa20.81■□□□□ 0.92
LMBR1-220ENST00000609081 ANKRD26Q9UPS8 1709 aa20.81■□□□□ 0.92
LMBR1-220ENST00000609081 BCL11BQ9C0K0 894 aaPredicted RBP20.8■□□□□ 0.92
LMBR1-220ENST00000609081 FBLN1P23142 703 aa20.79■□□□□ 0.92
LMBR1-220ENST00000609081 LTV1Q96GA3 475 aaPredicted RBP20.79■□□□□ 0.92
LMBR1-220ENST00000609081 NSD2O96028 1365 aa20.79■□□□□ 0.92
LMBR1-220ENST00000609081 RREB1Q92766 1687 aa20.78■□□□□ 0.92
LMBR1-220ENST00000609081 PLSCR1O15162 318 aa20.77■□□□□ 0.92
LMBR1-220ENST00000609081 EZH2Q15910 746 aaKnown RBP20.77■□□□□ 0.92
LMBR1-220ENST00000609081 PANK3Q9H999 370 aa20.77■□□□□ 0.92
LMBR1-220ENST00000609081 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
LMBR1-220ENST00000609081 RGPD2P0DJD1 1756 aa20.75■□□□□ 0.91
LMBR1-220ENST00000609081 HSP90AB2PQ58FF8 381 aa20.73■□□□□ 0.91
LMBR1-220ENST00000609081 NHSQ6T4R5 1651 aa20.73■□□□□ 0.91
LMBR1-220ENST00000609081 WASHC2AQ641Q2 1341 aa20.73■□□□□ 0.91
LMBR1-220ENST00000609081 NBPF14Q5TI25 921 aa20.72■□□□□ 0.91
LMBR1-220ENST00000609081 NUP188Q5SRE5 1749 aa20.72■□□□□ 0.91
LMBR1-220ENST00000609081 NBPF6Q5VWK0 638 aa20.71■□□□□ 0.91
LMBR1-220ENST00000609081 RAPGEF4Q8WZA2 1011 aa20.71■□□□□ 0.91
LMBR1-220ENST00000609081 NBPF4Q96M43 638 aa20.71■□□□□ 0.91
LMBR1-220ENST00000609081 KNSTRNQ9Y448 316 aa20.71■□□□□ 0.91
LMBR1-220ENST00000609081 EMILIN1Q9Y6C2 1016 aa20.71■□□□□ 0.91
LMBR1-220ENST00000609081 KIF7Q2M1P5 1343 aa20.71■□□□□ 0.91
LMBR1-220ENST00000609081 KAT6BQ8WYB5 2073 aa20.71■□□□□ 0.91
LMBR1-220ENST00000609081 ZCRB1Q8TBF4 217 aaKnown RBP20.69■□□□□ 0.9
LMBR1-220ENST00000609081 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
LMBR1-220ENST00000609081 SRCAPQ6ZRS2 3230 aa20.68■□□□□ 0.9
LMBR1-220ENST00000609081 PPM1GO15355 546 aaPredicted RBP20.68■□□□□ 0.9
LMBR1-220ENST00000609081 MEGF6O75095 1541 aa20.68■□□□□ 0.9
LMBR1-220ENST00000609081 TATP17735 454 aaPredicted RBP20.67■□□□□ 0.9
LMBR1-220ENST00000609081 DDX54Q8TDD1 881 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms