RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 ECM2O94769 699 aaPredicted RBP8.71□□□□□ -1.02
LINC00649-213ENST00000608431 BARGINQ6ZT62 677 aa8.71□□□□□ -1.02
LINC00649-213ENST00000608431 DNAJC5GQ8N7S2 189 aa8.71□□□□□ -1.02
LINC00649-213ENST00000608431 PHF8Q9UPP1 1060 aa8.71□□□□□ -1.02
LINC00649-213ENST00000608431 TOPAZ1Q8N9V7 1692 aa8.71□□□□□ -1.02
LINC00649-213ENST00000608431 NRXN1Q9ULB1 1477 aa8.7□□□□□ -1.02
LINC00649-213ENST00000608431 CLTCL1P53675 1640 aa8.7□□□□□ -1.02
LINC00649-213ENST00000608431 SLC15A2Q16348 729 aa8.7□□□□□ -1.02
LINC00649-213ENST00000608431 PPLO60437 1756 aa8.7□□□□□ -1.02
LINC00649-213ENST00000608431 OVOS2A0A0G2JMS6 1433 aa8.7□□□□□ -1.02
LINC00649-213ENST00000608431 OVOS2A0A0J9YW53 1432 aa8.7□□□□□ -1.02
LINC00649-213ENST00000608431 OVOS2Q6IE36 1432 aa8.7□□□□□ -1.02
LINC00649-213ENST00000608431 QSER1Q2KHR3 1735 aa8.69□□□□□ -1.02
LINC00649-213ENST00000608431 PRDM11Q9NQV5 511 aa8.69□□□□□ -1.02
LINC00649-213ENST00000608431 TECPR2O15040 1411 aa8.69□□□□□ -1.02
LINC00649-213ENST00000608431 RGL2O15211 777 aa8.68□□□□□ -1.02
LINC00649-213ENST00000608431 DHX57Q6P158 1386 aaKnown RBP8.68□□□□□ -1.02
LINC00649-213ENST00000608431 ARHGEF28Q8N1W1 1705 aaKnown RBP8.68□□□□□ -1.02
LINC00649-213ENST00000608431 KAT6BQ8WYB5 2073 aa8.68□□□□□ -1.02
LINC00649-213ENST00000608431 LOC105371045A0A1W2PR82 267 aa8.67□□□□□ -1.02
LINC00649-213ENST00000608431 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
LINC00649-213ENST00000608431 PHRF1Q9P1Y6 1649 aaKnown RBP8.67□□□□□ -1.02
LINC00649-213ENST00000608431 USP35Q9P2H5 1018 aa8.67□□□□□ -1.02
LINC00649-213ENST00000608431 CIZ1Q9ULV3 898 aaPredicted RBP8.67□□□□□ -1.02
LINC00649-213ENST00000608431 ADCY9O60503 1353 aa8.66□□□□□ -1.02
LINC00649-213ENST00000608431 JMYQ8N9B5 988 aa8.66□□□□□ -1.02
LINC00649-213ENST00000608431 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
LINC00649-213ENST00000608431 THRAP3Q9Y2W1 955 aaKnown RBP8.66□□□□□ -1.02
LINC00649-213ENST00000608431 POLD1P28340 1107 aa8.65□□□□□ -1.02
LINC00649-213ENST00000608431 TCP11L2Q8N4U5 519 aa8.65□□□□□ -1.02
LINC00649-213ENST00000608431 KLRG1Q96E93 195 aa8.65□□□□□ -1.02
LINC00649-213ENST00000608431 ATP7BP35670 1465 aa8.64□□□□□ -1.03
LINC00649-213ENST00000608431 SSH2Q76I76 1423 aa8.64□□□□□ -1.03
LINC00649-213ENST00000608431 WNK3Q9BYP7 1800 aa8.64□□□□□ -1.03
LINC00649-213ENST00000608431 EVA1CP58658 441 aa8.64□□□□□ -1.03
LINC00649-213ENST00000608431 WAPLQ7Z5K2 1190 aa8.64□□□□□ -1.03
LINC00649-213ENST00000608431 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
LINC00649-213ENST00000608431 LRRC37A3O60309 1634 aa8.64□□□□□ -1.03
LINC00649-213ENST00000608431 NUP155O75694 1391 aa8.63□□□□□ -1.03
LINC00649-213ENST00000608431 GPRASP1Q5JY77 1395 aa8.63□□□□□ -1.03
LINC00649-213ENST00000608431 KIAA0232Q92628 1395 aa8.63□□□□□ -1.03
LINC00649-213ENST00000608431 RPGRIP1LQ68CZ1 1315 aa8.63□□□□□ -1.03
LINC00649-213ENST00000608431 TXNRD1Q16881 649 aa8.63□□□□□ -1.03
LINC00649-213ENST00000608431 KANK4Q5T7N3 995 aaPredicted RBP8.63□□□□□ -1.03
LINC00649-213ENST00000608431 SLC16A10Q8TF71 515 aa8.63□□□□□ -1.03
LINC00649-213ENST00000608431 PAPPAQ13219 1627 aa8.62□□□□□ -1.03
LINC00649-213ENST00000608431 TOMM70O94826 608 aa8.62□□□□□ -1.03
LINC00649-213ENST00000608431 YBX3P16989 372 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00649-213ENST00000608431 CHADLQ6NUI6 762 aa8.62□□□□□ -1.03
LINC00649-213ENST00000608431 RASEFQ8IZ41 740 aa8.62□□□□□ -1.03
LINC00649-213ENST00000608431 ABCC11Q96J66 1382 aa8.61□□□□□ -1.03
LINC00649-213ENST00000608431 KIF3CO14782 793 aa8.61□□□□□ -1.03
LINC00649-213ENST00000608431 LMO7Q8WWI1 1683 aa8.61□□□□□ -1.03
LINC00649-213ENST00000608431 ANKARQ7Z5J8 1434 aa8.61□□□□□ -1.03
LINC00649-213ENST00000608431 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
LINC00649-213ENST00000608431 TNRC18O15417 2968 aaPredicted RBP8.61□□□□□ -1.03
LINC00649-213ENST00000608431 PDE4DIPQ5VU43 2346 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 TULP4Q9NRJ4 1543 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 GSE1Q14687 1217 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 CHRNA2Q15822 529 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 NLGN2Q8NFZ4 835 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 STK26Q9P289 416 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 BCL9O00512 1426 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 VPS8Q8N3P4 1428 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
LINC00649-213ENST00000608431 DDB1Q16531 1140 aa8.59□□□□□ -1.03
LINC00649-213ENST00000608431 PMFBP1Q8TBY8 1022 aa8.59□□□□□ -1.03
LINC00649-213ENST00000608431 RNF25Q96BH1 459 aaPredicted RBP8.59□□□□□ -1.03
LINC00649-213ENST00000608431 PLEKHH1Q9ULM0 1364 aa8.59□□□□□ -1.03
LINC00649-213ENST00000608431 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
LINC00649-213ENST00000608431 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
LINC00649-213ENST00000608431 FXR2P51116 673 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC00649-213ENST00000608431 PLCB2Q00722 1185 aa8.58□□□□□ -1.04
LINC00649-213ENST00000608431 DCAF8Q5TAQ9 597 aa8.58□□□□□ -1.04
LINC00649-213ENST00000608431 LARP1Q6PKG0 1096 aaKnown RBP8.58□□□□□ -1.04
LINC00649-213ENST00000608431 BTAF1O14981 1849 aa8.58□□□□□ -1.04
LINC00649-213ENST00000608431 ANKRD30BQ9BXX2 1392 aa8.58□□□□□ -1.04
LINC00649-213ENST00000608431 KIAA1210Q9ULL0 1709 aa8.57□□□□□ -1.04
LINC00649-213ENST00000608431 PAK3O75914 559 aaPredicted RBP8.57□□□□□ -1.04
LINC00649-213ENST00000608431 ZC3H6P61129 1189 aaKnown RBP8.57□□□□□ -1.04
LINC00649-213ENST00000608431 SIRT1Q96EB6 747 aa8.57□□□□□ -1.04
LINC00649-213ENST00000608431 CRB1P82279 1406 aa8.56□□□□□ -1.04
LINC00649-213ENST00000608431 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
LINC00649-213ENST00000608431 EIF3AQ14152 1382 aaKnown RBP8.56□□□□□ -1.04
LINC00649-213ENST00000608431 PIK3C2AO00443 1686 aa8.56□□□□□ -1.04
LINC00649-213ENST00000608431 TNS2Q63HR2 1409 aa8.55□□□□□ -1.04
LINC00649-213ENST00000608431 YTHDC2Q9H6S0 1430 aaKnown RBP8.55□□□□□ -1.04
LINC00649-213ENST00000608431 FAM212AQ96EL1 285 aa8.55□□□□□ -1.04
LINC00649-213ENST00000608431 FARP1Q9Y4F1 1045 aaPredicted RBP8.55□□□□□ -1.04
LINC00649-213ENST00000608431 COL5A2P05997 1499 aaPredicted RBP8.54□□□□□ -1.04
LINC00649-213ENST00000608431 BRD4O60885 1362 aaPredicted RBP8.54□□□□□ -1.04
LINC00649-213ENST00000608431 ROCK1Q13464 1354 aa8.54□□□□□ -1.04
LINC00649-213ENST00000608431 HSPA1AP0DMV8 641 aaKnown RBP8.54□□□□□ -1.04
LINC00649-213ENST00000608431 HSPA1BP0DMV9 641 aaKnown RBP8.54□□□□□ -1.04
LINC00649-213ENST00000608431 PRKAR2AP13861 404 aaKnown RBP8.54□□□□□ -1.04
LINC00649-213ENST00000608431 FSTL1Q12841 308 aa8.54□□□□□ -1.04
LINC00649-213ENST00000608431 CHRDL2Q6WN34 429 aa8.54□□□□□ -1.04
LINC00649-213ENST00000608431 RBM46Q8TBY0 533 aaKnown RBP8.54□□□□□ -1.04
LINC00649-213ENST00000608431 CDCA7Q9BWT1 371 aaPredicted RBP8.54□□□□□ -1.04
LINC00649-213ENST00000608431 CPDO75976 1380 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms