RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 KIF3AQ9Y496 699 aa14.69□□□□□ -0.06
CTCFL-217ENST00000608425 PREX1Q8TCU6 1659 aa14.69□□□□□ -0.06
CTCFL-217ENST00000608425 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
CTCFL-217ENST00000608425 HSP90AB1P08238 724 aaKnown RBP14.69□□□□□ -0.06
CTCFL-217ENST00000608425 KLHL40Q2TBA0 621 aa14.69□□□□□ -0.06
CTCFL-217ENST00000608425 SOX12O15370 315 aa14.68□□□□□ -0.06
CTCFL-217ENST00000608425 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
CTCFL-217ENST00000608425 QRICH2Q9H0J4 1663 aa14.68□□□□□ -0.06
CTCFL-217ENST00000608425 SLFN14P0C7P3 912 aa14.68□□□□□ -0.06
CTCFL-217ENST00000608425 PCDHB15Q9Y5E8 787 aa14.68□□□□□ -0.06
CTCFL-217ENST00000608425 ERICH4A6NGS2 130 aa14.67□□□□□ -0.06
CTCFL-217ENST00000608425 KIAA2012Q0VF49 1180 aa14.67□□□□□ -0.06
CTCFL-217ENST00000608425 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
CTCFL-217ENST00000608425 NCOA3Q9Y6Q9 1424 aa14.67□□□□□ -0.06
CTCFL-217ENST00000608425 ZNF445P59923 1031 aa14.67□□□□□ -0.06
CTCFL-217ENST00000608425 CCDC39Q9UFE4 941 aa14.67□□□□□ -0.06
CTCFL-217ENST00000608425 PTMAP06454 111 aaKnown RBP14.66□□□□□ -0.06
CTCFL-217ENST00000608425 PRR29P0C7W0 189 aa14.66□□□□□ -0.06
CTCFL-217ENST00000608425 TNNQ9UQP3 1299 aa14.66□□□□□ -0.06
CTCFL-217ENST00000608425 MCM5P33992 734 aa14.66□□□□□ -0.06
CTCFL-217ENST00000608425 GOLGA2Q08379 1002 aa14.66□□□□□ -0.06
CTCFL-217ENST00000608425 BAG4O95429 457 aaKnown RBP14.65□□□□□ -0.06
CTCFL-217ENST00000608425 GTF2F1P35269 517 aaKnown RBP eCLIP14.65□□□□□ -0.063e-6■■□□□ 13.2
CTCFL-217ENST00000608425 MCTP1Q6DN14 999 aa14.65□□□□□ -0.06
CTCFL-217ENST00000608425 SMC5Q8IY18 1101 aa14.65□□□□□ -0.06
CTCFL-217ENST00000608425 CHAMP1Q96JM3 812 aa14.65□□□□□ -0.06
CTCFL-217ENST00000608425 AGLP35573 1532 aa14.65□□□□□ -0.06
CTCFL-217ENST00000608425 KNSTRNQ9Y448 316 aa14.65□□□□□ -0.06
CTCFL-217ENST00000608425 AK9Q5TCS8 1911 aa14.65□□□□□ -0.06
CTCFL-217ENST00000608425 VGFO15240 615 aaPredicted RBP14.65□□□□□ -0.06
CTCFL-217ENST00000608425 C14orf93Q9H972 538 aaKnown RBP14.65□□□□□ -0.06
CTCFL-217ENST00000608425 ZFYVE9O95405 1425 aa14.65□□□□□ -0.07
CTCFL-217ENST00000608425 SAMD1Q6SPF0 538 aaPredicted RBP14.64□□□□□ -0.07
CTCFL-217ENST00000608425 ARHGEF28Q8N1W1 1705 aaKnown RBP14.64□□□□□ -0.07
CTCFL-217ENST00000608425 HMGN5P82970 282 aaKnown RBP14.64□□□□□ -0.07
CTCFL-217ENST00000608425 SLC20A2Q08357 652 aa14.64□□□□□ -0.07
CTCFL-217ENST00000608425 PRIMPOLQ96LW4 560 aa14.64□□□□□ -0.07
CTCFL-217ENST00000608425 TIGD1Q96MW7 591 aa14.64□□□□□ -0.07
CTCFL-217ENST00000608425 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
CTCFL-217ENST00000608425 TMEM131LA2VDJ0 1609 aa14.63□□□□□ -0.07
CTCFL-217ENST00000608425 TSPOAP1O95153 1857 aa14.63□□□□□ -0.07
CTCFL-217ENST00000608425 SLFN5Q08AF3 891 aa14.62□□□□□ -0.07
CTCFL-217ENST00000608425 NOLC1Q14978 699 aaKnown RBP eCLIP14.62□□□□□ -0.07
CTCFL-217ENST00000608425 RBM42Q9BTD8 480 aaKnown RBP14.62□□□□□ -0.07
CTCFL-217ENST00000608425 MYO5BQ9ULV0 1848 aa14.62□□□□□ -0.07
CTCFL-217ENST00000608425 IBTKQ9P2D0 1353 aaPredicted RBP14.62□□□□□ -0.07
CTCFL-217ENST00000608425 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
CTCFL-217ENST00000608425 EP400NLQ6ZTU2 488 aa14.62□□□□□ -0.07
CTCFL-217ENST00000608425 TTC12Q9H892 705 aaPredicted RBP14.62□□□□□ -0.07
CTCFL-217ENST00000608425 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
CTCFL-217ENST00000608425 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
CTCFL-217ENST00000608425 CNPY4Q8N129 248 aa14.61□□□□□ -0.07
CTCFL-217ENST00000608425 GAS2L2Q8NHY3 880 aa14.61□□□□□ -0.07
CTCFL-217ENST00000608425 USP32Q8NFA0 1604 aa14.61□□□□□ -0.07
CTCFL-217ENST00000608425 SYCE3A1L190 88 aa14.61□□□□□ -0.07
CTCFL-217ENST00000608425 GOLGA6L22H0YM25 854 aa14.61□□□□□ -0.07
CTCFL-217ENST00000608425 RBM25P49756 843 aaKnown RBP14.61□□□□□ -0.07
CTCFL-217ENST00000608425 CIZ1Q9ULV3 898 aaPredicted RBP14.61□□□□□ -0.07
CTCFL-217ENST00000608425 RIOK3O14730 519 aaKnown RBP14.6□□□□□ -0.07
CTCFL-217ENST00000608425 FAM69CQ0P6D2 419 aa14.6□□□□□ -0.07
CTCFL-217ENST00000608425 LOC102724159A0A0B4J2E5 919 aa14.6□□□□□ -0.07
CTCFL-217ENST00000608425 TULP2O00295 520 aa14.6□□□□□ -0.07
CTCFL-217ENST00000608425 PSEN1P49768 467 aa14.6□□□□□ -0.07
CTCFL-217ENST00000608425 PWP2Q15269 919 aaKnown RBP14.6□□□□□ -0.07
CTCFL-217ENST00000608425 TMX1Q9H3N1 280 aa14.6□□□□□ -0.07
CTCFL-217ENST00000608425 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
CTCFL-217ENST00000608425 ZNF521Q96K83 1311 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 PKP1Q13835 747 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 OGFRQ9NZT2 677 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 CGNL1Q0VF96 1302 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 KIF13AQ9H1H9 1805 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 NAA30Q147X3 362 aaPredicted RBP14.59□□□□□ -0.07
CTCFL-217ENST00000608425 GPT2Q8TD30 523 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 ANKRD7Q92527 254 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 LMBRD1Q9NUN5 540 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 PPP6R1Q9UPN7 881 aa14.59□□□□□ -0.07
CTCFL-217ENST00000608425 PPP2R1AP30153 589 aa14.58□□□□□ -0.08
CTCFL-217ENST00000608425 ARHGEF40Q8TER5 1519 aa14.57□□□□□ -0.08
CTCFL-217ENST00000608425 PRPF40AO75400 957 aaKnown RBP14.57□□□□□ -0.08
CTCFL-217ENST00000608425 RLBP1P12271 317 aa14.57□□□□□ -0.08
CTCFL-217ENST00000608425 TMEM63CQ9P1W3 806 aa14.57□□□□□ -0.08
CTCFL-217ENST00000608425 PTMSP20962 102 aa14.57□□□□□ -0.08
CTCFL-217ENST00000608425 HAP1P54257 671 aaPredicted RBP14.57□□□□□ -0.08
CTCFL-217ENST00000608425 TERF2Q15554 542 aa14.57□□□□□ -0.08
CTCFL-217ENST00000608425 PIBF1Q8WXW3 757 aa14.57□□□□□ -0.08
CTCFL-217ENST00000608425 CCDC66A2RUB6 948 aa14.56□□□□□ -0.08
CTCFL-217ENST00000608425 PUS7Q96PZ0 661 aaKnown RBP14.56□□□□□ -0.08
CTCFL-217ENST00000608425 GABPB1Q06547 395 aaPredicted RBP14.56□□□□□ -0.08
CTCFL-217ENST00000608425 SNX21Q969T3 373 aa14.56□□□□□ -0.08
CTCFL-217ENST00000608425 IDI1Q13907 227 aa14.55□□□□□ -0.08
CTCFL-217ENST00000608425 ST7Q9NRC1 585 aa14.55□□□□□ -0.08
CTCFL-217ENST00000608425 FEZ2Q9UHY8 353 aaPredicted RBP14.55□□□□□ -0.08
CTCFL-217ENST00000608425 APPP05067 770 aa14.55□□□□□ -0.08
CTCFL-217ENST00000608425 MMP14P50281 582 aa14.55□□□□□ -0.08
CTCFL-217ENST00000608425 WWC1Q8IX03 1113 aa14.55□□□□□ -0.08
CTCFL-217ENST00000608425 CLTCQ00610 1675 aaKnown RBP14.55□□□□□ -0.08
CTCFL-217ENST00000608425 SPATA31D1Q6ZQQ2 1576 aa14.55□□□□□ -0.08
CTCFL-217ENST00000608425 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
CTCFL-217ENST00000608425 KIF2CQ99661 725 aa14.55□□□□□ -0.08
CTCFL-217ENST00000608425 FEZ1Q99689 392 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms