RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 CRB1P82279 1406 aa26.81■■□□□ 1.88
CTSA-217ENST00000607482 MON2Q7Z3U7 1717 aa26.8■■□□□ 1.88
CTSA-217ENST00000607482 FAM196AQ6ZSG2 479 aa26.8■■□□□ 1.88
CTSA-217ENST00000607482 DEFB132Q7Z7B7 95 aa26.8■■□□□ 1.88
CTSA-217ENST00000607482 LMO7Q8WWI1 1683 aa26.79■■□□□ 1.88
CTSA-217ENST00000607482 CD163L1Q9NR16 1453 aa26.79■■□□□ 1.88
CTSA-217ENST00000607482 AXIN2Q9Y2T1 843 aa26.78■■□□□ 1.88
CTSA-217ENST00000607482 USP31Q70CQ4 1352 aa26.77■■□□□ 1.88
CTSA-217ENST00000607482 THSD7AQ9UPZ6 1657 aa26.76■■□□□ 1.87
CTSA-217ENST00000607482 WDR17Q8IZU2 1322 aa26.76■■□□□ 1.87
CTSA-217ENST00000607482 COG3Q96JB2 828 aa26.76■■□□□ 1.87
CTSA-217ENST00000607482 POLR3GLQ9BT43 218 aa26.73■■□□□ 1.87
CTSA-217ENST00000607482 TRIM37O94972 964 aa26.72■■□□□ 1.87
CTSA-217ENST00000607482 DDB1Q16531 1140 aa26.72■■□□□ 1.87
CTSA-217ENST00000607482 ANKRD36BQ8N2N9 1353 aa26.71■■□□□ 1.87
CTSA-217ENST00000607482 CDCA7Q9BWT1 371 aaPredicted RBP26.71■■□□□ 1.87
CTSA-217ENST00000607482 NFAT5O94916 1531 aa26.7■■□□□ 1.86
CTSA-217ENST00000607482 CARD10Q9BWT7 1032 aa26.69■■□□□ 1.86
CTSA-217ENST00000607482 NLRP2Q9NX02 1062 aa26.69■■□□□ 1.86
CTSA-217ENST00000607482 C11orf95C9JLR9 678 aaPredicted RBP26.68■■□□□ 1.86
CTSA-217ENST00000607482 EIF4G2P78344 907 aaKnown RBP eCLIP26.67■■□□□ 1.86
CTSA-217ENST00000607482 EN1Q05925 392 aaPredicted RBP26.67■■□□□ 1.86
CTSA-217ENST00000607482 APBA3O96018 575 aa26.66■■□□□ 1.86
CTSA-217ENST00000607482 COL18A1P39060 1754 aa26.66■■□□□ 1.86
CTSA-217ENST00000607482 AMPHP49418 695 aa26.65■■□□□ 1.86
CTSA-217ENST00000607482 CCDC7Q96M83 1385 aa26.64■■□□□ 1.86
CTSA-217ENST00000607482 ANKRD24Q8TF21 1146 aa26.64■■□□□ 1.86
CTSA-217ENST00000607482 RGPD1P0DJD0 1748 aa26.64■■□□□ 1.85
CTSA-217ENST00000607482 EXOC5O00471 708 aa26.63■■□□□ 1.85
CTSA-217ENST00000607482 LTV1Q96GA3 475 aaPredicted RBP26.63■■□□□ 1.85
CTSA-217ENST00000607482 ABCC6O95255 1503 aa26.63■■□□□ 1.85
CTSA-217ENST00000607482 OVOS2A0A0J9YW53 1432 aa26.63■■□□□ 1.85
CTSA-217ENST00000607482 OVOS2Q6IE36 1432 aa26.63■■□□□ 1.85
CTSA-217ENST00000607482 RGPD5Q99666 1765 aa26.62■■□□□ 1.85
CTSA-217ENST00000607482 GGNBP2Q9H3C7 697 aa26.62■■□□□ 1.85
CTSA-217ENST00000607482 ERBB3P21860 1342 aa26.61■■□□□ 1.85
CTSA-217ENST00000607482 USP54Q70EL1 1684 aa26.6■■□□□ 1.85
CTSA-217ENST00000607482 IP6K1Q92551 441 aa26.6■■□□□ 1.85
CTSA-217ENST00000607482 LTN1O94822 1766 aa26.59■■□□□ 1.85
CTSA-217ENST00000607482 OVOS2A0A0G2JMS6 1433 aa26.59■■□□□ 1.85
CTSA-217ENST00000607482 PARP4Q9UKK3 1724 aaKnown RBP26.59■■□□□ 1.85
CTSA-217ENST00000607482 FYB1O15117 783 aa26.58■■□□□ 1.85
CTSA-217ENST00000607482 HSPA5P11021 654 aaKnown RBP26.57■■□□□ 1.84
CTSA-217ENST00000607482 EZH2Q15910 746 aaKnown RBP26.57■■□□□ 1.84
CTSA-217ENST00000607482 IL2RBP14784 551 aa26.55■■□□□ 1.84
CTSA-217ENST00000607482 MAP3K19Q56UN5 1328 aa26.55■■□□□ 1.84
CTSA-217ENST00000607482 FBLN1P23142 703 aa26.54■■□□□ 1.84
CTSA-217ENST00000607482 PSDA5PKW4 1024 aaPredicted RBP26.53■■□□□ 1.84
CTSA-217ENST00000607482 DISP2A7MBM2 1401 aa26.52■■□□□ 1.84
CTSA-217ENST00000607482 LRRC37A3O60309 1634 aa26.52■■□□□ 1.84
CTSA-217ENST00000607482 HOXC9P31274 260 aa26.52■■□□□ 1.84
CTSA-217ENST00000607482 RRS1Q15050 365 aaKnown RBP26.52■■□□□ 1.84
CTSA-217ENST00000607482 MARCH10Q8NA82 808 aaPredicted RBP26.52■■□□□ 1.84
CTSA-217ENST00000607482 NSD3Q9BZ95 1437 aa26.52■■□□□ 1.84
CTSA-217ENST00000607482 PARD3Q8TEW0 1356 aa26.51■■□□□ 1.83
CTSA-217ENST00000607482 CAMKK2Q96RR4 588 aa26.51■■□□□ 1.83
CTSA-217ENST00000607482 CGNL1Q0VF96 1302 aa26.5■■□□□ 1.83
CTSA-217ENST00000607482 CARD14Q9BXL6 1004 aa26.5■■□□□ 1.83
CTSA-217ENST00000607482 TNS1Q9HBL0 1735 aaKnown RBP26.5■■□□□ 1.83
CTSA-217ENST00000607482 NBPF14Q5TI25 921 aa26.49■■□□□ 1.83
CTSA-217ENST00000607482 BCL11BQ9C0K0 894 aaPredicted RBP26.48■■□□□ 1.83
CTSA-217ENST00000607482 SMG6Q86US8 1419 aaKnown RBP26.48■■□□□ 1.83
CTSA-217ENST00000607482 PPM1GO15355 546 aaPredicted RBP26.47■■□□□ 1.83
CTSA-217ENST00000607482 R3HDM1Q15032 1099 aaKnown RBP26.47■■□□□ 1.83
CTSA-217ENST00000607482 WNK3Q9BYP7 1800 aa26.46■■□□□ 1.83
CTSA-217ENST00000607482 RTL1A6NKG5 1358 aa26.46■■□□□ 1.83
CTSA-217ENST00000607482 TNS2Q63HR2 1409 aa26.45■■□□□ 1.82
CTSA-217ENST00000607482 KIF20BQ96Q89 1820 aa26.44■■□□□ 1.82
CTSA-217ENST00000607482 DDX54Q8TDD1 881 aaKnown RBP26.43■■□□□ 1.82
CTSA-217ENST00000607482 SRCAPQ6ZRS2 3230 aa26.43■■□□□ 1.82
CTSA-217ENST00000607482 MYOM1P52179 1685 aa26.42■■□□□ 1.82
CTSA-217ENST00000607482 PANK3Q9H999 370 aa26.41■■□□□ 1.82
CTSA-217ENST00000607482 HSP90AB2PQ58FF8 381 aa26.4■■□□□ 1.82
CTSA-217ENST00000607482 ACSBG1Q96GR2 724 aa26.4■■□□□ 1.82
CTSA-217ENST00000607482 PEAK1Q9H792 1746 aa26.39■■□□□ 1.82
CTSA-217ENST00000607482 FAM208AQ9UK61 1670 aaKnown RBP26.39■■□□□ 1.82
CTSA-217ENST00000607482 FLT4P35916 1363 aa26.39■■□□□ 1.82
CTSA-217ENST00000607482 PLSCR1O15162 318 aa26.39■■□□□ 1.82
CTSA-217ENST00000607482 RAPGEF4Q8WZA2 1011 aa26.39■■□□□ 1.82
CTSA-217ENST00000607482 TNNT2P45379 298 aaPredicted RBP26.38■■□□□ 1.81
CTSA-217ENST00000607482 BCL9O00512 1426 aa26.38■■□□□ 1.81
CTSA-217ENST00000607482 PTF1AQ7RTS3 328 aa26.37■■□□□ 1.81
CTSA-217ENST00000607482 KIF24Q5T7B8 1368 aa26.36■■□□□ 1.81
CTSA-217ENST00000607482 USHBP1Q8N6Y0 703 aa26.36■■□□□ 1.81
CTSA-217ENST00000607482 EMILIN1Q9Y6C2 1016 aa26.36■■□□□ 1.81
CTSA-217ENST00000607482 INSRP06213 1382 aa26.35■■□□□ 1.81
CTSA-217ENST00000607482 KCNQ2O43526 872 aa26.35■■□□□ 1.81
CTSA-217ENST00000607482 NBPF6Q5VWK0 638 aa26.35■■□□□ 1.81
CTSA-217ENST00000607482 ZCRB1Q8TBF4 217 aaKnown RBP26.35■■□□□ 1.81
CTSA-217ENST00000607482 NBPF4Q96M43 638 aa26.35■■□□□ 1.81
CTSA-217ENST00000607482 SBF2Q86WG5 1849 aa26.33■■□□□ 1.81
CTSA-217ENST00000607482 TATP17735 454 aaPredicted RBP26.33■■□□□ 1.81
CTSA-217ENST00000607482 SYTL4Q96C24 671 aaPredicted RBP26.33■■□□□ 1.81
CTSA-217ENST00000607482 KNSTRNQ9Y448 316 aa26.33■■□□□ 1.81
CTSA-217ENST00000607482 KAT6BQ8WYB5 2073 aa26.3■■□□□ 1.8
CTSA-217ENST00000607482 TXNRD1Q16881 649 aa26.29■■□□□ 1.8
CTSA-217ENST00000607482 MORC1Q86VD1 984 aa26.29■■□□□ 1.8
CTSA-217ENST00000607482 RREB1Q92766 1687 aa26.27■■□□□ 1.8
CTSA-217ENST00000607482 WASHC2AQ641Q2 1341 aa26.26■■□□□ 1.79
CTSA-217ENST00000607482 STK32BQ9NY57 414 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms