RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 PDGFDQ9GZP0 370 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-214ENST00000607020 ARHGEF25Q86VW2 580 aa21.73■■□□□ 1.07
SSBP4-214ENST00000607020 SLIT3O75094 1523 aa21.73■■□□□ 1.07
SSBP4-214ENST00000607020 ZBTB7CA1YPR0 619 aa21.72■■□□□ 1.07
SSBP4-214ENST00000607020 CARD10Q9BWT7 1032 aa21.72■■□□□ 1.07
SSBP4-214ENST00000607020 ZBTB7AO95365 584 aa21.71■■□□□ 1.07
SSBP4-214ENST00000607020 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
SSBP4-214ENST00000607020 RGPD3A6NKT7 1758 aaPredicted RBP21.71■■□□□ 1.07
SSBP4-214ENST00000607020 RGPD4Q7Z3J3 1758 aa21.71■■□□□ 1.07
SSBP4-214ENST00000607020 SLC15A2Q16348 729 aa21.7■■□□□ 1.06
SSBP4-214ENST00000607020 KCNH5Q8NCM2 988 aa21.7■■□□□ 1.06
SSBP4-214ENST00000607020 ZNF692Q9BU19 519 aaPredicted RBP21.7■■□□□ 1.06
SSBP4-214ENST00000607020 STK32BQ9NY57 414 aa21.7■■□□□ 1.06
SSBP4-214ENST00000607020 KIAA1210Q9ULL0 1709 aa21.69■■□□□ 1.06
SSBP4-214ENST00000607020 EXOC5O00471 708 aa21.68■■□□□ 1.06
SSBP4-214ENST00000607020 ZNF784Q8NCA9 323 aaPredicted RBP21.68■■□□□ 1.06
SSBP4-214ENST00000607020 SYT17Q9BSW7 474 aa21.68■■□□□ 1.06
SSBP4-214ENST00000607020 SGIP1Q9BQI5 828 aa21.67■■□□□ 1.06
SSBP4-214ENST00000607020 ATF5Q9Y2D1 282 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-214ENST00000607020 LRRC37A3O60309 1634 aa21.66■■□□□ 1.06
SSBP4-214ENST00000607020 CPSF1Q10570 1443 aaKnown RBP21.66■■□□□ 1.06
SSBP4-214ENST00000607020 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
SSBP4-214ENST00000607020 TTC21BQ7Z4L5 1316 aa21.65■■□□□ 1.06
SSBP4-214ENST00000607020 CASZ1Q86V15 1759 aa21.65■■□□□ 1.06
SSBP4-214ENST00000607020 EVC2Q86UK5 1308 aa21.64■■□□□ 1.05
SSBP4-214ENST00000607020 FHDC1Q9C0D6 1143 aaPredicted RBP21.64■■□□□ 1.05
SSBP4-214ENST00000607020 CSB-PGBD3P0DP91 1061 aa21.63■■□□□ 1.05
SSBP4-214ENST00000607020 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
SSBP4-214ENST00000607020 TTC21AQ8NDW8 1320 aa21.62■■□□□ 1.05
SSBP4-214ENST00000607020 COL18A1P39060 1754 aa21.62■■□□□ 1.05
SSBP4-214ENST00000607020 SBF2Q86WG5 1849 aa21.59■■□□□ 1.05
SSBP4-214ENST00000607020 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
SSBP4-214ENST00000607020 ARXQ96QS3 562 aa21.57■■□□□ 1.04
SSBP4-214ENST00000607020 TNS2Q63HR2 1409 aa21.56■■□□□ 1.04
SSBP4-214ENST00000607020 PIK3C2AO00443 1686 aa21.56■■□□□ 1.04
SSBP4-214ENST00000607020 SOX12O15370 315 aa21.54■■□□□ 1.04
SSBP4-214ENST00000607020 ABCC6O95255 1503 aa21.54■■□□□ 1.04
SSBP4-214ENST00000607020 USP31Q70CQ4 1352 aa21.53■■□□□ 1.04
SSBP4-214ENST00000607020 C1QTNF8P60827 252 aa21.53■■□□□ 1.04
SSBP4-214ENST00000607020 L3MBTL2Q969R5 705 aa21.53■■□□□ 1.04
SSBP4-214ENST00000607020 UTRNP46939 3433 aa21.53■■□□□ 1.04
SSBP4-214ENST00000607020 MYOM1P52179 1685 aa21.53■■□□□ 1.04
SSBP4-214ENST00000607020 NFAT5O94916 1531 aa21.52■■□□□ 1.04
SSBP4-214ENST00000607020 ERBB3P21860 1342 aa21.52■■□□□ 1.03
SSBP4-214ENST00000607020 IL2RBP14784 551 aa21.51■■□□□ 1.03
SSBP4-214ENST00000607020 SLC16A10Q8TF71 515 aa21.51■■□□□ 1.03
SSBP4-214ENST00000607020 ACSBG1Q96GR2 724 aa21.51■■□□□ 1.03
SSBP4-214ENST00000607020 TRPM1Q7Z4N2 1603 aa21.51■■□□□ 1.03
SSBP4-214ENST00000607020 KTN1Q86UP2 1357 aaKnown RBP21.5■■□□□ 1.03
SSBP4-214ENST00000607020 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
SSBP4-214ENST00000607020 LRRC4BQ9NT99 713 aa21.49■■□□□ 1.03
SSBP4-214ENST00000607020 QRICH2Q9H0J4 1663 aa21.49■■□□□ 1.03
SSBP4-214ENST00000607020 ZNF827Q17R98 1081 aa21.48■■□□□ 1.03
SSBP4-214ENST00000607020 AKT1S1Q96B36 256 aa21.48■■□□□ 1.03
SSBP4-214ENST00000607020 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
SSBP4-214ENST00000607020 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
SSBP4-214ENST00000607020 SLC27A3Q5K4L6 730 aa21.46■■□□□ 1.03
SSBP4-214ENST00000607020 AKAP12Q02952 1782 aa21.44■■□□□ 1.02
SSBP4-214ENST00000607020 GPR162Q16538 588 aa21.44■■□□□ 1.02
SSBP4-214ENST00000607020 ANKRD24Q8TF21 1146 aa21.44■■□□□ 1.02
SSBP4-214ENST00000607020 PAPPAQ13219 1627 aa21.44■■□□□ 1.02
SSBP4-214ENST00000607020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.43■■□□□ 1.02
SSBP4-214ENST00000607020 ROCK2O75116 1388 aaKnown RBP21.43■■□□□ 1.02
SSBP4-214ENST00000607020 NHSQ6T4R5 1651 aa21.43■■□□□ 1.02
SSBP4-214ENST00000607020 POLD1P28340 1107 aa21.42■■□□□ 1.02
SSBP4-214ENST00000607020 NME9Q86XW9 330 aa21.42■■□□□ 1.02
SSBP4-214ENST00000607020 SBNO2Q9Y2G9 1366 aa21.42■■□□□ 1.02
SSBP4-214ENST00000607020 PNPLA7Q6ZV29 1317 aa21.39■■□□□ 1.01
SSBP4-214ENST00000607020 IP6K1Q92551 441 aa21.38■■□□□ 1.01
SSBP4-214ENST00000607020 HDGFL2Q7Z4V5 671 aaPredicted RBP21.37■■□□□ 1.01
SSBP4-214ENST00000607020 RGPD5Q99666 1765 aa21.37■■□□□ 1.01
SSBP4-214ENST00000607020 CD163L1Q9NR16 1453 aa21.37■■□□□ 1.01
SSBP4-214ENST00000607020 GIGYF1O75420 1035 aaPredicted RBP21.36■■□□□ 1.01
SSBP4-214ENST00000607020 DDX54Q8TDD1 881 aaKnown RBP21.36■■□□□ 1.01
SSBP4-214ENST00000607020 PUS7Q96PZ0 661 aaKnown RBP21.36■■□□□ 1.01
SSBP4-214ENST00000607020 TFCP2L1Q9NZI6 479 aa21.36■■□□□ 1.01
SSBP4-214ENST00000607020 SIN3AQ96ST3 1273 aa21.35■■□□□ 1.01
SSBP4-214ENST00000607020 SLC12A5Q9H2X9 1139 aa21.34■■□□□ 1.01
SSBP4-214ENST00000607020 EDC4Q6P2E9 1401 aaKnown RBP21.34■■□□□ 1.01
SSBP4-214ENST00000607020 GRIN3BO60391 1043 aa21.33■■□□□ 1.01
SSBP4-214ENST00000607020 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
SSBP4-214ENST00000607020 TERF2IPQ9NYB0 399 aa21.33■■□□□ 1.01
SSBP4-214ENST00000607020 USP54Q70EL1 1684 aa21.32■■□□□ 1
SSBP4-214ENST00000607020 CHD4Q14839 1912 aa21.32■■□□□ 1
SSBP4-214ENST00000607020 NLGN2Q8NFZ4 835 aa21.32■■□□□ 1
SSBP4-214ENST00000607020 TMC1Q8TDI8 760 aa21.32■■□□□ 1
SSBP4-214ENST00000607020 ANKRD36BQ8N2N9 1353 aa21.32■■□□□ 1
SSBP4-214ENST00000607020 IFFO2Q5TF58 517 aa21.31■■□□□ 1
SSBP4-214ENST00000607020 KLHL34Q8N239 644 aa21.31■■□□□ 1
SSBP4-214ENST00000607020 BTAF1O14981 1849 aa21.29■■□□□ 1
SSBP4-214ENST00000607020 KCNQ4P56696 695 aa21.29■■□□□ 1
SSBP4-214ENST00000607020 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
SSBP4-214ENST00000607020 MON2Q7Z3U7 1717 aa21.29■■□□□ 1
SSBP4-214ENST00000607020 NSD2O96028 1365 aa21.28■■□□□ 1
SSBP4-214ENST00000607020 NEUROD1Q13562 356 aa21.28■■□□□ 1
SSBP4-214ENST00000607020 ZCRB1Q8TBF4 217 aaKnown RBP21.28■■□□□ 1
SSBP4-214ENST00000607020 SYTL4Q96C24 671 aaPredicted RBP21.28■■□□□ 1
SSBP4-214ENST00000607020 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 1
SSBP4-214ENST00000607020 CARD11Q9BXL7 1154 aa21.27■■□□□ 1
SSBP4-214ENST00000607020 A0A1W2PP64 1363 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms