RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 PPM1GO15355 546 aaPredicted RBP22.01■■□□□ 1.11
PMF1-206ENST00000606952 SOX12O15370 315 aa22.01■■□□□ 1.11
PMF1-206ENST00000606952 AMPHP49418 695 aa22.01■■□□□ 1.11
PMF1-206ENST00000606952 RGPD5Q99666 1765 aa22■■□□□ 1.11
PMF1-206ENST00000606952 EIF4A2Q14240 407 aaKnown RBP22■■□□□ 1.11
PMF1-206ENST00000606952 HSP90AB2PQ58FF8 381 aa22■■□□□ 1.11
PMF1-206ENST00000606952 NCAPD2Q15021 1401 aa21.99■■□□□ 1.11
PMF1-206ENST00000606952 KDRP35968 1356 aa21.97■■□□□ 1.11
PMF1-206ENST00000606952 CABLES1Q8TDN4 633 aa21.96■■□□□ 1.11
PMF1-206ENST00000606952 IGSF1Q8N6C5 1336 aa21.96■■□□□ 1.11
PMF1-206ENST00000606952 COL14A1Q05707 1796 aaKnown RBP21.96■■□□□ 1.11
PMF1-206ENST00000606952 KIAA0232Q92628 1395 aa21.96■■□□□ 1.11
PMF1-206ENST00000606952 U2AF1L5P0DN76 240 aaPredicted RBP21.95■■□□□ 1.1
PMF1-206ENST00000606952 U2AF1Q01081 240 aaKnown RBP eCLIP21.95■■□□□ 1.1
PMF1-206ENST00000606952 FCHSD2O94868 740 aa21.94■■□□□ 1.1
PMF1-206ENST00000606952 NCBP3Q53F19 620 aaKnown RBP21.94■■□□□ 1.1
PMF1-206ENST00000606952 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
PMF1-206ENST00000606952 RGPD2P0DJD1 1756 aa21.93■■□□□ 1.1
PMF1-206ENST00000606952 HNRNPUQ00839 825 aaKnown RBP eCLIP21.93■■□□□ 1.1
PMF1-206ENST00000606952 RUNDC1Q96C34 613 aa21.93■■□□□ 1.1
PMF1-206ENST00000606952 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
PMF1-206ENST00000606952 PLEKHF1Q96S99 279 aa21.93■■□□□ 1.1
PMF1-206ENST00000606952 JCADQ9P266 1359 aa21.92■■□□□ 1.1
PMF1-206ENST00000606952 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
PMF1-206ENST00000606952 ZC3H6P61129 1189 aaKnown RBP21.92■■□□□ 1.1
PMF1-206ENST00000606952 NGEFQ8N5V2 710 aa21.92■■□□□ 1.1
PMF1-206ENST00000606952 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
PMF1-206ENST00000606952 PNNQ9H307 717 aaKnown RBP21.92■■□□□ 1.1
PMF1-206ENST00000606952 ERBB3P21860 1342 aa21.91■■□□□ 1.1
PMF1-206ENST00000606952 PLEKHG2Q9H7P9 1386 aa21.89■■□□□ 1.1
PMF1-206ENST00000606952 EYA1Q99502 592 aa21.89■■□□□ 1.09
PMF1-206ENST00000606952 AXIN2Q9Y2T1 843 aa21.89■■□□□ 1.09
PMF1-206ENST00000606952 PLCH1Q4KWH8 1693 aa21.88■■□□□ 1.09
PMF1-206ENST00000606952 NWD2Q9ULI1 1742 aa21.88■■□□□ 1.09
PMF1-206ENST00000606952 COL5A2P05997 1499 aaPredicted RBP21.88■■□□□ 1.09
PMF1-206ENST00000606952 HSPA1LP34931 641 aa21.87■■□□□ 1.09
PMF1-206ENST00000606952 PRDM11Q9NQV5 511 aa21.87■■□□□ 1.09
PMF1-206ENST00000606952 ANKRD24Q8TF21 1146 aa21.86■■□□□ 1.09
PMF1-206ENST00000606952 NRAPQ86VF7 1730 aa21.86■■□□□ 1.09
PMF1-206ENST00000606952 PLEKHG5O94827 1062 aa21.85■■□□□ 1.09
PMF1-206ENST00000606952 HAP1P54257 671 aaPredicted RBP21.85■■□□□ 1.09
PMF1-206ENST00000606952 FBXO41Q8TF61 875 aa21.85■■□□□ 1.09
PMF1-206ENST00000606952 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
PMF1-206ENST00000606952 SPATA31A6Q5VVP1 1343 aa21.84■■□□□ 1.09
PMF1-206ENST00000606952 PRKAR2BP31323 418 aa21.84■■□□□ 1.09
PMF1-206ENST00000606952 CCDC146Q8IYE0 955 aa21.84■■□□□ 1.09
PMF1-206ENST00000606952 ZNF521Q96K83 1311 aa21.83■■□□□ 1.09
PMF1-206ENST00000606952 DLG5Q8TDM6 1919 aa21.83■■□□□ 1.09
PMF1-206ENST00000606952 CHRNA2Q15822 529 aa21.83■■□□□ 1.09
PMF1-206ENST00000606952 SULT6B1Q6IMI4 303 aa21.83■■□□□ 1.09
PMF1-206ENST00000606952 ZBTB7CA1YPR0 619 aa21.82■■□□□ 1.08
PMF1-206ENST00000606952 APAF1O14727 1248 aa21.82■■□□□ 1.08
PMF1-206ENST00000606952 HMOX1P09601 288 aa21.82■■□□□ 1.08
PMF1-206ENST00000606952 CCDC27Q2M243 656 aa21.82■■□□□ 1.08
PMF1-206ENST00000606952 AEBP1Q8IUX7 1158 aa21.82■■□□□ 1.08
PMF1-206ENST00000606952 TCP11L2Q8N4U5 519 aa21.82■■□□□ 1.08
PMF1-206ENST00000606952 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
PMF1-206ENST00000606952 NBPF6Q5VWK0 638 aa21.81■■□□□ 1.08
PMF1-206ENST00000606952 NBPF4Q96M43 638 aa21.81■■□□□ 1.08
PMF1-206ENST00000606952 WDR17Q8IZU2 1322 aa21.8■■□□□ 1.08
PMF1-206ENST00000606952 MAPK8IP3Q9UPT6 1336 aa21.8■■□□□ 1.08
PMF1-206ENST00000606952 LTV1Q96GA3 475 aaPredicted RBP21.8■■□□□ 1.08
PMF1-206ENST00000606952 SLIT2O94813 1529 aa21.8■■□□□ 1.08
PMF1-206ENST00000606952 PKD1L3Q7Z443 1732 aa21.78■■□□□ 1.08
PMF1-206ENST00000606952 LRP6O75581 1613 aa21.78■■□□□ 1.08
PMF1-206ENST00000606952 TMPOP42166 694 aaKnown RBP21.78■■□□□ 1.08
PMF1-206ENST00000606952 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.77■■□□□ 1.08
PMF1-206ENST00000606952 NEFMP07197 916 aa21.77■■□□□ 1.08
PMF1-206ENST00000606952 PHACTR3Q96KR7 559 aa21.77■■□□□ 1.08
PMF1-206ENST00000606952 PARP4Q9UKK3 1724 aaKnown RBP21.77■■□□□ 1.08
PMF1-206ENST00000606952 WNK3Q9BYP7 1800 aa21.76■■□□□ 1.07
PMF1-206ENST00000606952 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
PMF1-206ENST00000606952 PDE3BQ13370 1112 aa21.76■■□□□ 1.07
PMF1-206ENST00000606952 NFE2L2Q16236 605 aa21.76■■□□□ 1.07
PMF1-206ENST00000606952 CRB1P82279 1406 aa21.75■■□□□ 1.07
PMF1-206ENST00000606952 CARD10Q9BWT7 1032 aa21.73■■□□□ 1.07
PMF1-206ENST00000606952 LRRC37A3O60309 1634 aa21.73■■□□□ 1.07
PMF1-206ENST00000606952 WWC1Q8IX03 1113 aa21.72■■□□□ 1.07
PMF1-206ENST00000606952 NUTM2BA6NNL0 878 aaPredicted RBP21.71■■□□□ 1.07
PMF1-206ENST00000606952 NUTM2EB1AL46 878 aaPredicted RBP21.71■■□□□ 1.07
PMF1-206ENST00000606952 NUTM2AQ8IVF1 878 aaPredicted RBP21.71■■□□□ 1.07
PMF1-206ENST00000606952 USHBP1Q8N6Y0 703 aa21.71■■□□□ 1.07
PMF1-206ENST00000606952 GAS2L2Q8NHY3 880 aa21.71■■□□□ 1.07
PMF1-206ENST00000606952 BTG4Q9NY30 223 aa21.71■■□□□ 1.07
PMF1-206ENST00000606952 TRIM35Q9UPQ4 493 aa21.71■■□□□ 1.07
PMF1-206ENST00000606952 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
PMF1-206ENST00000606952 MEGF6O75095 1541 aa21.7■■□□□ 1.07
PMF1-206ENST00000606952 CSB-PGBD3P0DP91 1061 aa21.7■■□□□ 1.06
PMF1-206ENST00000606952 NLRP2Q9NX02 1062 aa21.7■■□□□ 1.06
PMF1-206ENST00000606952 LMOD3Q0VAK6 560 aa21.69■■□□□ 1.06
PMF1-206ENST00000606952 WDR63Q8IWG1 891 aa21.69■■□□□ 1.06
PMF1-206ENST00000606952 RRP7AQ9Y3A4 280 aaKnown RBP21.69■■□□□ 1.06
PMF1-206ENST00000606952 OVOS2A0A0G2JMS6 1433 aa21.69■■□□□ 1.06
PMF1-206ENST00000606952 RIPK4P57078 832 aa21.68■■□□□ 1.06
PMF1-206ENST00000606952 AMOTQ4VCS5 1084 aa21.68■■□□□ 1.06
PMF1-206ENST00000606952 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.68■■□□□ 1.06
PMF1-206ENST00000606952 IL16Q14005 1332 aa21.68■■□□□ 1.06
PMF1-206ENST00000606952 DISP2A7MBM2 1401 aa21.68■■□□□ 1.06
PMF1-206ENST00000606952 SHANK3Q9BYB0 1731 aa21.67■■□□□ 1.06
PMF1-206ENST00000606952 HTATSF1O43719 755 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms