RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 DDB1Q16531 1140 aa34.55■■■■□ 3.12
SNX5-219ENST00000606602 COL18A1P39060 1754 aa34.54■■■■□ 3.12
SNX5-219ENST00000606602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.53■■■■□ 3.12
SNX5-219ENST00000606602 CSB-PGBD3P0DP91 1061 aa34.52■■■■□ 3.12
SNX5-219ENST00000606602 TMC1Q8TDI8 760 aa34.52■■■■□ 3.12
SNX5-219ENST00000606602 OVOS2A0A0G2JMS6 1433 aa34.52■■■■□ 3.12
SNX5-219ENST00000606602 OVOS2A0A0J9YW53 1432 aa34.52■■■■□ 3.12
SNX5-219ENST00000606602 OVOS2Q6IE36 1432 aa34.52■■■■□ 3.12
SNX5-219ENST00000606602 CDCA7Q9BWT1 371 aaPredicted RBP34.49■■■■□ 3.11
SNX5-219ENST00000606602 CARD10Q9BWT7 1032 aa34.48■■■■□ 3.11
SNX5-219ENST00000606602 NFAT5O94916 1531 aa34.47■■■■□ 3.11
SNX5-219ENST00000606602 NBPF14Q5TI25 921 aa34.47■■■■□ 3.11
SNX5-219ENST00000606602 LRRC37A3O60309 1634 aa34.46■■■■□ 3.11
SNX5-219ENST00000606602 HDGFL2Q7Z4V5 671 aaPredicted RBP34.46■■■■□ 3.11
SNX5-219ENST00000606602 SLC12A5Q9H2X9 1139 aa34.46■■■■□ 3.11
SNX5-219ENST00000606602 NME9Q86XW9 330 aa34.45■■■■□ 3.11
SNX5-219ENST00000606602 USP31Q70CQ4 1352 aa34.44■■■■□ 3.1
SNX5-219ENST00000606602 CD163L1Q9NR16 1453 aa34.44■■■■□ 3.1
SNX5-219ENST00000606602 MON2Q7Z3U7 1717 aa34.44■■■■□ 3.1
SNX5-219ENST00000606602 PEAK1Q9H792 1746 aa34.42■■■■□ 3.1
SNX5-219ENST00000606602 RREB1Q92766 1687 aa34.42■■■■□ 3.1
SNX5-219ENST00000606602 MARCH10Q8NA82 808 aaPredicted RBP34.42■■■■□ 3.1
SNX5-219ENST00000606602 TERF2IPQ9NYB0 399 aa34.4■■■■□ 3.1
SNX5-219ENST00000606602 NUP188Q5SRE5 1749 aa34.38■■■■□ 3.09
SNX5-219ENST00000606602 BCL11BQ9C0K0 894 aaPredicted RBP34.38■■■■□ 3.09
SNX5-219ENST00000606602 RGPD5Q99666 1765 aa34.38■■■■□ 3.09
SNX5-219ENST00000606602 CCDC7Q96M83 1385 aa34.37■■■■□ 3.09
SNX5-219ENST00000606602 EXOC5O00471 708 aa34.37■■■■□ 3.09
SNX5-219ENST00000606602 PLSCR1O15162 318 aa34.37■■■■□ 3.09
SNX5-219ENST00000606602 PTF1AQ7RTS3 328 aa34.37■■■■□ 3.09
SNX5-219ENST00000606602 PUS7Q96PZ0 661 aaKnown RBP34.37■■■■□ 3.09
SNX5-219ENST00000606602 EDC4Q6P2E9 1401 aaKnown RBP34.37■■■■□ 3.09
SNX5-219ENST00000606602 ABCC6O95255 1503 aa34.36■■■■□ 3.09
SNX5-219ENST00000606602 WNK3Q9BYP7 1800 aa34.34■■■■□ 3.09
SNX5-219ENST00000606602 A0A1W2PP64 1363 aa34.34■■■■□ 3.09
SNX5-219ENST00000606602 BCL9O00512 1426 aa34.32■■■■□ 3.08
SNX5-219ENST00000606602 ST20-MTHFSA0A0A6YYL1 179 aa34.32■■■■□ 3.08
SNX5-219ENST00000606602 NLRP2Q9NX02 1062 aa34.32■■■■□ 3.08
SNX5-219ENST00000606602 ERBB3P21860 1342 aa34.31■■■■□ 3.08
SNX5-219ENST00000606602 TESK2Q96S53 571 aa34.31■■■■□ 3.08
SNX5-219ENST00000606602 USP54Q70EL1 1684 aa34.3■■■■□ 3.08
SNX5-219ENST00000606602 TRIM26Q12899 539 aaPredicted RBP34.29■■■■□ 3.08
SNX5-219ENST00000606602 SBF2Q86WG5 1849 aa34.28■■■■□ 3.08
SNX5-219ENST00000606602 ANKRD24Q8TF21 1146 aa34.27■■■■□ 3.08
SNX5-219ENST00000606602 TNS2Q63HR2 1409 aa34.26■■■■□ 3.07
SNX5-219ENST00000606602 SLC24A1O60721 1099 aa34.25■■■■□ 3.07
SNX5-219ENST00000606602 NINLQ9Y2I6 1382 aa34.24■■■■□ 3.07
SNX5-219ENST00000606602 RGPD3A6NKT7 1758 aaPredicted RBP34.23■■■■□ 3.07
SNX5-219ENST00000606602 RGPD4Q7Z3J3 1758 aa34.23■■■■□ 3.07
SNX5-219ENST00000606602 PROM2Q8N271 834 aa34.23■■■■□ 3.07
SNX5-219ENST00000606602 SPON1Q9HCB6 807 aa34.23■■■■□ 3.07
SNX5-219ENST00000606602 IL2RBP14784 551 aa34.22■■■■□ 3.07
SNX5-219ENST00000606602 ANO8Q9HCE9 1232 aaPredicted RBP34.22■■■■□ 3.07
SNX5-219ENST00000606602 KCNQ2O43526 872 aa34.2■■■■□ 3.07
SNX5-219ENST00000606602 LTN1O94822 1766 aa34.2■■■■□ 3.07
SNX5-219ENST00000606602 IP6K1Q92551 441 aa34.18■■■■□ 3.06
SNX5-219ENST00000606602 COG3Q96JB2 828 aa34.18■■■■□ 3.06
SNX5-219ENST00000606602 PPP1R1BQ9UD71 204 aaPredicted RBP34.18■■■■□ 3.06
SNX5-219ENST00000606602 TXNRD1Q16881 649 aa34.17■■■■□ 3.06
SNX5-219ENST00000606602 ACSBG1Q96GR2 724 aa34.16■■■■□ 3.06
SNX5-219ENST00000606602 LTV1Q96GA3 475 aaPredicted RBP34.15■■■■□ 3.06
SNX5-219ENST00000606602 TMF1P82094 1093 aa34.11■■■■□ 3.05
SNX5-219ENST00000606602 STK32BQ9NY57 414 aa34.11■■■■□ 3.05
SNX5-219ENST00000606602 ANKRD36BQ8N2N9 1353 aa34.11■■■■□ 3.05
SNX5-219ENST00000606602 USP47Q96K76 1375 aa34.11■■■■□ 3.05
SNX5-219ENST00000606602 MAP3K19Q56UN5 1328 aa34.1■■■■□ 3.05
SNX5-219ENST00000606602 FBLN1P23142 703 aa34.09■■■■□ 3.05
SNX5-219ENST00000606602 PDGFDQ9GZP0 370 aaPredicted RBP34.09■■■■□ 3.05
SNX5-219ENST00000606602 AMPHP49418 695 aa34.08■■■■□ 3.05
SNX5-219ENST00000606602 HOXC9P31274 260 aa34.07■■■■□ 3.04
SNX5-219ENST00000606602 NHSQ6T4R5 1651 aa34.06■■■■□ 3.04
SNX5-219ENST00000606602 SLC15A2Q16348 729 aa34.06■■■■□ 3.04
SNX5-219ENST00000606602 DDX54Q8TDD1 881 aaKnown RBP34.05■■■■□ 3.04
SNX5-219ENST00000606602 ZBTB7AO95365 584 aa34.04■■■■□ 3.04
SNX5-219ENST00000606602 GGNBP2Q9H3C7 697 aa34.02■■■■□ 3.04
SNX5-219ENST00000606602 CASZ1Q86V15 1759 aa34.01■■■■□ 3.04
SNX5-219ENST00000606602 FYB1O15117 783 aa34.01■■■■□ 3.03
SNX5-219ENST00000606602 CDCA8Q53HL2 280 aa34■■■■□ 3.03
SNX5-219ENST00000606602 RRS1Q15050 365 aaKnown RBP33.98■■■■□ 3.03
SNX5-219ENST00000606602 ATF5Q9Y2D1 282 aaPredicted RBP33.98■■■■□ 3.03
SNX5-219ENST00000606602 FAM208AQ9UK61 1670 aaKnown RBP33.97■■■■□ 3.03
SNX5-219ENST00000606602 RTL1A6NKG5 1358 aa33.95■■■■□ 3.02
SNX5-219ENST00000606602 DCAF8L1A6NGE4 600 aa33.94■■■■□ 3.02
SNX5-219ENST00000606602 PTGER2P43116 358 aa33.93■■■■□ 3.02
SNX5-219ENST00000606602 ZCRB1Q8TBF4 217 aaKnown RBP33.92■■■■□ 3.02
SNX5-219ENST00000606602 BTAF1O14981 1849 aa33.92■■■■□ 3.02
SNX5-219ENST00000606602 SYTL4Q96C24 671 aaPredicted RBP33.91■■■■□ 3.02
SNX5-219ENST00000606602 MTFR1LQ9H019 292 aa33.91■■■■□ 3.02
SNX5-219ENST00000606602 NBPF6Q5VWK0 638 aa33.9■■■■□ 3.02
SNX5-219ENST00000606602 NBPF4Q96M43 638 aa33.9■■■■□ 3.02
SNX5-219ENST00000606602 LRRC4BQ9NT99 713 aa33.9■■■■□ 3.02
SNX5-219ENST00000606602 TIMELESSQ9UNS1 1208 aa33.9■■■■□ 3.02
SNX5-219ENST00000606602 PRIM1P49642 420 aaKnown RBP33.88■■■■□ 3.01
SNX5-219ENST00000606602 MEGF6O75095 1541 aa33.88■■■■□ 3.01
SNX5-219ENST00000606602 USHBP1Q8N6Y0 703 aa33.87■■■■□ 3.01
SNX5-219ENST00000606602 SMG6Q86US8 1419 aaKnown RBP33.87■■■■□ 3.01
SNX5-219ENST00000606602 YY1P25490 414 aa33.86■■■■□ 3.01
SNX5-219ENST00000606602 ZNF827Q17R98 1081 aa33.86■■■■□ 3.01
SNX5-219ENST00000606602 SLC27A3Q5K4L6 730 aa33.85■■■■□ 3.01
SNX5-219ENST00000606602 CARD14Q9BXL6 1004 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms