RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 PROM2Q8N271 834 aa19.39■□□□□ 0.69
CTSA-212ENST00000606394 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
CTSA-212ENST00000606394 WDR17Q8IZU2 1322 aa19.39■□□□□ 0.69
CTSA-212ENST00000606394 USP6P35125 1406 aa19.38■□□□□ 0.69
CTSA-212ENST00000606394 ZBTB7AO95365 584 aa19.37■□□□□ 0.69
CTSA-212ENST00000606394 MARCH10Q8NA82 808 aaPredicted RBP19.37■□□□□ 0.69
CTSA-212ENST00000606394 STK32BQ9NY57 414 aa19.37■□□□□ 0.69
CTSA-212ENST00000606394 MYOM1P52179 1685 aa19.36■□□□□ 0.69
CTSA-212ENST00000606394 CENPJQ9HC77 1338 aaPredicted RBP19.36■□□□□ 0.69
CTSA-212ENST00000606394 PTF1AQ7RTS3 328 aa19.36■□□□□ 0.69
CTSA-212ENST00000606394 PDGFDQ9GZP0 370 aaPredicted RBP19.36■□□□□ 0.69
CTSA-212ENST00000606394 WNK3Q9BYP7 1800 aa19.36■□□□□ 0.69
CTSA-212ENST00000606394 COL18A1P39060 1754 aa19.36■□□□□ 0.69
CTSA-212ENST00000606394 AKAP12Q02952 1782 aa19.36■□□□□ 0.69
CTSA-212ENST00000606394 ZBTB7CA1YPR0 619 aa19.35■□□□□ 0.69
CTSA-212ENST00000606394 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
CTSA-212ENST00000606394 TXNRD1Q16881 649 aa19.34■□□□□ 0.69
CTSA-212ENST00000606394 SYT17Q9BSW7 474 aa19.34■□□□□ 0.69
CTSA-212ENST00000606394 CARD10Q9BWT7 1032 aa19.34■□□□□ 0.69
CTSA-212ENST00000606394 MTFR1LQ9H019 292 aa19.34■□□□□ 0.69
CTSA-212ENST00000606394 CABP2Q9NPB3 220 aa19.34■□□□□ 0.69
CTSA-212ENST00000606394 CPSF1Q10570 1443 aaKnown RBP19.34■□□□□ 0.69
CTSA-212ENST00000606394 KCNH5Q8NCM2 988 aa19.33■□□□□ 0.68
CTSA-212ENST00000606394 FHDC1Q9C0D6 1143 aaPredicted RBP19.33■□□□□ 0.68
CTSA-212ENST00000606394 CABP1Q9NZU7 370 aa19.33■□□□□ 0.68
CTSA-212ENST00000606394 AXIN2Q9Y2T1 843 aa19.33■□□□□ 0.68
CTSA-212ENST00000606394 CHD4Q14839 1912 aa19.32■□□□□ 0.68
CTSA-212ENST00000606394 ARHGEF25Q86VW2 580 aa19.32■□□□□ 0.68
CTSA-212ENST00000606394 ATF5Q9Y2D1 282 aaPredicted RBP19.32■□□□□ 0.68
CTSA-212ENST00000606394 PIK3C2AO00443 1686 aa19.31■□□□□ 0.68
CTSA-212ENST00000606394 EXOC5O00471 708 aa19.31■□□□□ 0.68
CTSA-212ENST00000606394 NBPF1Q3BBV0 1214 aa19.31■□□□□ 0.68
CTSA-212ENST00000606394 SGIP1Q9BQI5 828 aa19.31■□□□□ 0.68
CTSA-212ENST00000606394 QRICH2Q9H0J4 1663 aa19.3■□□□□ 0.68
CTSA-212ENST00000606394 CCDC7Q96M83 1385 aa19.3■□□□□ 0.68
CTSA-212ENST00000606394 MAP3K5Q99683 1374 aa19.3■□□□□ 0.68
CTSA-212ENST00000606394 ZNF692Q9BU19 519 aaPredicted RBP19.28■□□□□ 0.68
CTSA-212ENST00000606394 ABCC6O95255 1503 aa19.28■□□□□ 0.68
CTSA-212ENST00000606394 CSB-PGBD3P0DP91 1061 aa19.27■□□□□ 0.68
CTSA-212ENST00000606394 C1QTNF8P60827 252 aa19.27■□□□□ 0.68
CTSA-212ENST00000606394 TNS2Q63HR2 1409 aa19.26■□□□□ 0.67
CTSA-212ENST00000606394 TRPM1Q7Z4N2 1603 aa19.26■□□□□ 0.67
CTSA-212ENST00000606394 ARXQ96QS3 562 aa19.26■□□□□ 0.67
CTSA-212ENST00000606394 EVC2Q86UK5 1308 aa19.25■□□□□ 0.67
CTSA-212ENST00000606394 TTC21AQ8NDW8 1320 aa19.25■□□□□ 0.67
CTSA-212ENST00000606394 SENP3-EIF4A1A0A087X0R7 540 aa19.25■□□□□ 0.67
CTSA-212ENST00000606394 GOLGB1Q14789 3259 aaKnown RBP19.25■□□□□ 0.67
CTSA-212ENST00000606394 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
CTSA-212ENST00000606394 NHSQ6T4R5 1651 aa19.24■□□□□ 0.67
CTSA-212ENST00000606394 RGPD5Q99666 1765 aa19.24■□□□□ 0.67
CTSA-212ENST00000606394 PAPPAQ13219 1627 aa19.22■□□□□ 0.67
CTSA-212ENST00000606394 NFAT5O94916 1531 aa19.21■□□□□ 0.67
CTSA-212ENST00000606394 CEP350Q5VT06 3117 aa19.21■□□□□ 0.67
CTSA-212ENST00000606394 SLC16A10Q8TF71 515 aa19.19■□□□□ 0.66
CTSA-212ENST00000606394 SOX12O15370 315 aa19.17■□□□□ 0.66
CTSA-212ENST00000606394 ERBB3P21860 1342 aa19.17■□□□□ 0.66
CTSA-212ENST00000606394 IL2RBP14784 551 aa19.16■□□□□ 0.66
CTSA-212ENST00000606394 GPR162Q16538 588 aa19.16■□□□□ 0.66
CTSA-212ENST00000606394 ACSBG1Q96GR2 724 aa19.16■□□□□ 0.66
CTSA-212ENST00000606394 SLC27A3Q5K4L6 730 aa19.15■□□□□ 0.66
CTSA-212ENST00000606394 BTAF1O14981 1849 aa19.15■□□□□ 0.66
CTSA-212ENST00000606394 USP31Q70CQ4 1352 aa19.15■□□□□ 0.66
CTSA-212ENST00000606394 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
CTSA-212ENST00000606394 GIGYF1O75420 1035 aaPredicted RBP19.14■□□□□ 0.65
CTSA-212ENST00000606394 QSER1Q2KHR3 1735 aa19.14■□□□□ 0.65
CTSA-212ENST00000606394 POLD1P28340 1107 aa19.13■□□□□ 0.65
CTSA-212ENST00000606394 ZNF827Q17R98 1081 aa19.13■□□□□ 0.65
CTSA-212ENST00000606394 NLRP2Q9NX02 1062 aa19.13■□□□□ 0.65
CTSA-212ENST00000606394 COL24A1Q17RW2 1714 aa19.12■□□□□ 0.65
CTSA-212ENST00000606394 USP54Q70EL1 1684 aa19.12■□□□□ 0.65
CTSA-212ENST00000606394 IFFO2Q5TF58 517 aa19.12■□□□□ 0.65
CTSA-212ENST00000606394 AKT1S1Q96B36 256 aa19.12■□□□□ 0.65
CTSA-212ENST00000606394 LRRC4BQ9NT99 713 aa19.12■□□□□ 0.65
CTSA-212ENST00000606394 KAT6BQ8WYB5 2073 aa19.12■□□□□ 0.65
CTSA-212ENST00000606394 MON2Q7Z3U7 1717 aa19.1■□□□□ 0.65
CTSA-212ENST00000606394 ANKRD24Q8TF21 1146 aa19.08■□□□□ 0.64
CTSA-212ENST00000606394 PNPLA7Q6ZV29 1317 aa19.07■□□□□ 0.64
CTSA-212ENST00000606394 L3MBTL2Q969R5 705 aa19.07■□□□□ 0.64
CTSA-212ENST00000606394 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
CTSA-212ENST00000606394 LTN1O94822 1766 aa19.06■□□□□ 0.64
CTSA-212ENST00000606394 GRIN3BO60391 1043 aa19.06■□□□□ 0.64
CTSA-212ENST00000606394 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.06■□□□□ 0.64
CTSA-212ENST00000606394 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
CTSA-212ENST00000606394 KLHL34Q8N239 644 aa19.05■□□□□ 0.64
CTSA-212ENST00000606394 TFCP2L1Q9NZI6 479 aa19.05■□□□□ 0.64
CTSA-212ENST00000606394 SHANK3Q9BYB0 1731 aa19.04■□□□□ 0.64
CTSA-212ENST00000606394 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
CTSA-212ENST00000606394 NME9Q86XW9 330 aa19.02■□□□□ 0.64
CTSA-212ENST00000606394 ANKRD36BQ8N2N9 1353 aa19.02■□□□□ 0.64
CTSA-212ENST00000606394 CD163L1Q9NR16 1453 aa19.02■□□□□ 0.63
CTSA-212ENST00000606394 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
CTSA-212ENST00000606394 HDGFL2Q7Z4V5 671 aaPredicted RBP19.01■□□□□ 0.63
CTSA-212ENST00000606394 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
CTSA-212ENST00000606394 DDX54Q8TDD1 881 aaKnown RBP19.01■□□□□ 0.63
CTSA-212ENST00000606394 EDC4Q6P2E9 1401 aaKnown RBP19■□□□□ 0.63
CTSA-212ENST00000606394 IP6K1Q92551 441 aa19■□□□□ 0.63
CTSA-212ENST00000606394 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
CTSA-212ENST00000606394 LY75O60449 1722 aa19■□□□□ 0.63
CTSA-212ENST00000606394 HMGB2P26583 209 aaKnown RBP18.99■□□□□ 0.63
CTSA-212ENST00000606394 PRIM1P49642 420 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms