RNA–Protein interactions for RNA: ENST00000604423.1

SRGAP2-211, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 1 (best)

Gene SRGAP2, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-211ENST00000604423 KIAA0586Q9BVV6 1533 aa8.21□□□□□ -1.09
SRGAP2-211ENST00000604423 WDR43Q15061 677 aaKnown RBP eCLIP8.21□□□□□ -1.1
SRGAP2-211ENST00000604423 CC2D1BQ5T0F9 858 aaKnown RBP8.21□□□□□ -1.1
SRGAP2-211ENST00000604423 TRIM44Q96DX7 344 aaPredicted RBP8.21□□□□□ -1.1
SRGAP2-211ENST00000604423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 COPS2P61201 443 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 CAMSAP2Q08AD1 1489 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 ZNF608Q9ULD9 1512 aaPredicted RBP8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 IQGAP2Q13576 1575 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 ARID3CA6NKF2 412 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 ITGBL1O95965 494 aaPredicted RBP8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 XRCC6P12956 609 aaKnown RBP eCLIP8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 MRE11P49959 708 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 KCNC4Q03721 635 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 MTRQ99707 1265 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 CEP170Q5SW79 1584 aa8.2□□□□□ -1.1
SRGAP2-211ENST00000604423 TPM2P07951 284 aa8.19□□□□□ -1.1
SRGAP2-211ENST00000604423 GZF1Q9H116 711 aaPredicted RBP8.19□□□□□ -1.1
SRGAP2-211ENST00000604423 TRPM1Q7Z4N2 1603 aa8.19□□□□□ -1.1
SRGAP2-211ENST00000604423 CLASP1Q7Z460 1538 aa8.19□□□□□ -1.1
SRGAP2-211ENST00000604423 COL17A1Q9UMD9 1497 aaPredicted RBP8.19□□□□□ -1.1
SRGAP2-211ENST00000604423 SLC10A3P09131 477 aa8.19□□□□□ -1.1
SRGAP2-211ENST00000604423 MYH16Q9H6N6 1097 aa8.19□□□□□ -1.1
SRGAP2-211ENST00000604423 ADGRL2O95490 1459 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 ANKRD30AQ9BXX3 1397 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 FSD2A1L4K1 749 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 CFHP08603 1231 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 MAP2K5Q13163 448 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 DUSP27Q5VZP5 1158 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 ZNF516Q92618 1163 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 PANK2Q9BZ23 570 aa8.18□□□□□ -1.1
SRGAP2-211ENST00000604423 USP19O94966 1318 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 TJAP1Q5JTD0 557 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 ISY1Q9ULR0 285 aaKnown RBP8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 NLRP1Q9C000 1473 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 NINLQ9Y2I6 1382 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 ZNF644Q9H582 1327 aaPredicted RBP8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 DDX11L8A8MPP1 907 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 ESPNB1AK53 854 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 MCM4P33991 863 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 RDH13Q8NBN7 331 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 PODXL2Q9NZ53 605 aa8.17□□□□□ -1.1
SRGAP2-211ENST00000604423 NKTRP30414 1462 aaKnown RBP8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 LAMC1P11047 1609 aa8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 CGNL1Q0VF96 1302 aa8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 CCDC102AQ96A19 550 aa8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 ANTXR1Q9H6X2 564 aa8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 ANKRD50Q9ULJ7 1429 aa8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 PLEKHH1Q9ULM0 1364 aa8.16□□□□□ -1.1
SRGAP2-211ENST00000604423 IRF6O14896 467 aa8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 TRAK2O60296 914 aa8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 PDCL3Q9H2J4 239 aa8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 GRPEL1Q9HAV7 217 aa8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 PCDHB3Q9Y5E6 796 aa8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 EIF2AK4Q9P2K8 1649 aaKnown RBP8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 NUP155O75694 1391 aa8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 TDRD9Q8NDG6 1382 aaKnown RBP8.15□□□□□ -1.1
SRGAP2-211ENST00000604423 PBRM1Q86U86 1689 aa8.15□□□□□ -1.11
SRGAP2-211ENST00000604423 CHMP5Q9NZZ3 219 aa8.15□□□□□ -1.11
SRGAP2-211ENST00000604423 ADAMTS8Q9UP79 889 aa8.15□□□□□ -1.11
SRGAP2-211ENST00000604423 EIF4G3O43432 1585 aaKnown RBP8.15□□□□□ -1.11
SRGAP2-211ENST00000604423 RAPGEF6Q8TEU7 1601 aa8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 A0A0G2JS52 829 aa8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 PER1O15534 1290 aaPredicted RBP8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 BLOC1S3Q6QNY0 202 aa8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 KRI1Q8N9T8 703 aaKnown RBP8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 ZC3H15Q8WU90 426 aaKnown RBP8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 IL21Q9HBE4 155 aa8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 CFDP1Q9UEE9 299 aaPredicted RBP8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 ZMYM3Q14202 1370 aa8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 CENPJQ9HC77 1338 aaPredicted RBP8.14□□□□□ -1.11
SRGAP2-211ENST00000604423 TMF1P82094 1093 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 KMT5BQ4FZB7 885 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 NKX2-3Q8TAU0 364 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 CLUAP1Q96AJ1 413 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 TBC1D32Q96NH3 1257 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 PANK3Q9H999 370 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 CCDC144AA2RUR9 1427 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 PRAG1Q86YV5 1406 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 ERBINQ96RT1 1412 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 PRDM15P57071 1507 aaPredicted RBP8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 PLXNC1O60486 1568 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 MDM2Q00987 491 aaPredicted RBP8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 IFFO2Q5TF58 517 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 PMFBP1Q8TBY8 1022 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 ANP32BQ92688 251 aaKnown RBP8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 MYO5CQ9NQX4 1742 aa8.13□□□□□ -1.11
SRGAP2-211ENST00000604423 MINK1Q8N4C8 1332 aaPredicted RBP8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 IGHDP01880 384 aa8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 SLFN5Q08AF3 891 aa8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 HSCBQ8IWL3 235 aa8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 ZNF777Q9ULD5 760 aaPredicted RBP8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 DISP3Q9P2K9 1392 aa8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 ZNF521Q96K83 1311 aa8.12□□□□□ -1.11
SRGAP2-211ENST00000604423 PRR14Q9BWN1 585 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms