RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 SIN3AQ96ST3 1273 aa24.28■■□□□ 1.48
CCDC12-210ENST00000604181 TTC21BQ7Z4L5 1316 aa24.28■■□□□ 1.48
CCDC12-210ENST00000604181 EVC2Q86UK5 1308 aa24.28■■□□□ 1.48
CCDC12-210ENST00000604181 WDR17Q8IZU2 1322 aa24.28■■□□□ 1.48
CCDC12-210ENST00000604181 RGPD3A6NKT7 1758 aaPredicted RBP24.26■■□□□ 1.47
CCDC12-210ENST00000604181 AKAP12Q02952 1782 aa24.26■■□□□ 1.47
CCDC12-210ENST00000604181 RGPD4Q7Z3J3 1758 aa24.26■■□□□ 1.47
CCDC12-210ENST00000604181 SOX12O15370 315 aa24.26■■□□□ 1.47
CCDC12-210ENST00000604181 PLSCR1O15162 318 aa24.25■■□□□ 1.47
CCDC12-210ENST00000604181 KCNQ2O43526 872 aa24.25■■□□□ 1.47
CCDC12-210ENST00000604181 PROM2Q8N271 834 aa24.25■■□□□ 1.47
CCDC12-210ENST00000604181 PDGFDQ9GZP0 370 aaPredicted RBP24.25■■□□□ 1.47
CCDC12-210ENST00000604181 SPON1Q9HCB6 807 aa24.25■■□□□ 1.47
CCDC12-210ENST00000604181 NFAT5O94916 1531 aa24.24■■□□□ 1.47
CCDC12-210ENST00000604181 C11orf95C9JLR9 678 aaPredicted RBP24.23■■□□□ 1.47
CCDC12-210ENST00000604181 BCL11BQ9C0K0 894 aaPredicted RBP24.23■■□□□ 1.47
CCDC12-210ENST00000604181 CASZ1Q86V15 1759 aa24.22■■□□□ 1.47
CCDC12-210ENST00000604181 UTRNP46939 3433 aa24.22■■□□□ 1.47
CCDC12-210ENST00000604181 ROCK2O75116 1388 aaKnown RBP24.2■■□□□ 1.46
CCDC12-210ENST00000604181 CARD10Q9BWT7 1032 aa24.2■■□□□ 1.46
CCDC12-210ENST00000604181 BCL9O00512 1426 aa24.19■■□□□ 1.46
CCDC12-210ENST00000604181 ZNF692Q9BU19 519 aaPredicted RBP24.19■■□□□ 1.46
CCDC12-210ENST00000604181 PPP1R1BQ9UD71 204 aaPredicted RBP24.19■■□□□ 1.46
CCDC12-210ENST00000604181 KCNH5Q8NCM2 988 aa24.18■■□□□ 1.46
CCDC12-210ENST00000604181 TTC21AQ8NDW8 1320 aa24.17■■□□□ 1.46
CCDC12-210ENST00000604181 CSB-PGBD3P0DP91 1061 aa24.17■■□□□ 1.46
CCDC12-210ENST00000604181 YY1P25490 414 aa24.17■■□□□ 1.46
CCDC12-210ENST00000604181 NEUROD1Q13562 356 aa24.17■■□□□ 1.46
CCDC12-210ENST00000604181 CDCA7Q9BWT1 371 aaPredicted RBP24.16■■□□□ 1.46
CCDC12-210ENST00000604181 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
CCDC12-210ENST00000604181 NINLQ9Y2I6 1382 aa24.16■■□□□ 1.46
CCDC12-210ENST00000604181 MON2Q7Z3U7 1717 aa24.15■■□□□ 1.46
CCDC12-210ENST00000604181 CD163L1Q9NR16 1453 aa24.13■■□□□ 1.45
CCDC12-210ENST00000604181 ZBTB7AO95365 584 aa24.13■■□□□ 1.45
CCDC12-210ENST00000604181 TNS2Q63HR2 1409 aa24.12■■□□□ 1.45
CCDC12-210ENST00000604181 TXNRD1Q16881 649 aa24.12■■□□□ 1.45
CCDC12-210ENST00000604181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.12■■□□□ 1.456e-6■■■■□ 20.4
CCDC12-210ENST00000604181 EXOC5O00471 708 aa24.11■■□□□ 1.45
CCDC12-210ENST00000604181 PTGER2P43116 358 aa24.11■■□□□ 1.45
CCDC12-210ENST00000604181 NME9Q86XW9 330 aa24.11■■□□□ 1.45
CCDC12-210ENST00000604181 CCDC7Q96M83 1385 aa24.11■■□□□ 1.45
CCDC12-210ENST00000604181 MYOM1P52179 1685 aa24.11■■□□□ 1.45
CCDC12-210ENST00000604181 ABCC6O95255 1503 aa24.1■■□□□ 1.45
CCDC12-210ENST00000604181 USP54Q70EL1 1684 aa24.09■■□□□ 1.45
CCDC12-210ENST00000604181 USP31Q70CQ4 1352 aa24.09■■□□□ 1.45
CCDC12-210ENST00000604181 SBNO2Q9Y2G9 1366 aa24.09■■□□□ 1.45
CCDC12-210ENST00000604181 ATF5Q9Y2D1 282 aaPredicted RBP24.08■■□□□ 1.45
CCDC12-210ENST00000604181 ERBB3P21860 1342 aa24.08■■□□□ 1.44
CCDC12-210ENST00000604181 ACSBG1Q96GR2 724 aa24.07■■□□□ 1.44
CCDC12-210ENST00000604181 NHSQ6T4R5 1651 aa24.07■■□□□ 1.44
CCDC12-210ENST00000604181 LTN1O94822 1766 aa24.06■■□□□ 1.44
CCDC12-210ENST00000604181 SLC15A2Q16348 729 aa24.06■■□□□ 1.44
CCDC12-210ENST00000604181 STK32BQ9NY57 414 aa24.05■■□□□ 1.44
CCDC12-210ENST00000604181 SLC12A5Q9H2X9 1139 aa24.04■■□□□ 1.44
CCDC12-210ENST00000604181 NLRP2Q9NX02 1062 aa24.04■■□□□ 1.44
CCDC12-210ENST00000604181 KAT6BQ8WYB5 2073 aa24.02■■□□□ 1.44
CCDC12-210ENST00000604181 PAPPAQ13219 1627 aa24.02■■□□□ 1.44
CCDC12-210ENST00000604181 TMC1Q8TDI8 760 aa24.01■■□□□ 1.43
CCDC12-210ENST00000604181 ANKRD24Q8TF21 1146 aa24.01■■□□□ 1.43
CCDC12-210ENST00000604181 SGIP1Q9BQI5 828 aa24.01■■□□□ 1.43
CCDC12-210ENST00000604181 CARD11Q9BXL7 1154 aa24.01■■□□□ 1.43
CCDC12-210ENST00000604181 BTAF1O14981 1849 aa24■■□□□ 1.43
CCDC12-210ENST00000604181 IL2RBP14784 551 aa24■■□□□ 1.43
CCDC12-210ENST00000604181 FHDC1Q9C0D6 1143 aaPredicted RBP23.98■■□□□ 1.43
CCDC12-210ENST00000604181 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
CCDC12-210ENST00000604181 EDC4Q6P2E9 1401 aaKnown RBP23.98■■□□□ 1.43
CCDC12-210ENST00000604181 DCAF8L1A6NGE4 600 aa23.97■■□□□ 1.43
CCDC12-210ENST00000604181 ZNF827Q17R98 1081 aa23.97■■□□□ 1.43
CCDC12-210ENST00000604181 SYT17Q9BSW7 474 aa23.97■■□□□ 1.43
CCDC12-210ENST00000604181 LRRC4BQ9NT99 713 aa23.97■■□□□ 1.43
CCDC12-210ENST00000604181 MTFR1LQ9H019 292 aa23.96■■□□□ 1.43
CCDC12-210ENST00000604181 GOLGB1Q14789 3259 aaKnown RBP23.96■■□□□ 1.43
CCDC12-210ENST00000604181 HDGFL2Q7Z4V5 671 aaPredicted RBP23.95■■□□□ 1.42
CCDC12-210ENST00000604181 FBLN1P23142 703 aa23.92■■□□□ 1.42
CCDC12-210ENST00000604181 LTV1Q96GA3 475 aaPredicted RBP23.91■■□□□ 1.42
CCDC12-210ENST00000604181 IP6K1Q92551 441 aa23.9■■□□□ 1.42
CCDC12-210ENST00000604181 TERF2IPQ9NYB0 399 aa23.89■■□□□ 1.41
CCDC12-210ENST00000604181 ZNF784Q8NCA9 323 aaPredicted RBP23.88■■□□□ 1.41
CCDC12-210ENST00000604181 DDX54Q8TDD1 881 aaKnown RBP23.88■■□□□ 1.41
CCDC12-210ENST00000604181 TESK2Q96S53 571 aa23.88■■□□□ 1.41
CCDC12-210ENST00000604181 KCNQ4P56696 695 aa23.87■■□□□ 1.41
CCDC12-210ENST00000604181 AKT1S1Q96B36 256 aa23.87■■□□□ 1.41
CCDC12-210ENST00000604181 ARXQ96QS3 562 aa23.87■■□□□ 1.41
CCDC12-210ENST00000604181 RGPD2P0DJD1 1756 aa23.87■■□□□ 1.41
CCDC12-210ENST00000604181 MAP3K19Q56UN5 1328 aa23.86■■□□□ 1.41
CCDC12-210ENST00000604181 FAM208AQ9UK61 1670 aaKnown RBP23.86■■□□□ 1.41
CCDC12-210ENST00000604181 PUS7Q96PZ0 661 aaKnown RBP23.85■■□□□ 1.41
CCDC12-210ENST00000604181 SHANK3Q9BYB0 1731 aa23.84■■□□□ 1.41
CCDC12-210ENST00000604181 TUBGCP6Q96RT7 1819 aa23.84■■□□□ 1.41
CCDC12-210ENST00000604181 NSD2O96028 1365 aa23.83■■□□□ 1.41
CCDC12-210ENST00000604181 CHD4Q14839 1912 aa23.83■■□□□ 1.41
CCDC12-210ENST00000604181 TONSLQ96HA7 1378 aa23.83■■□□□ 1.41
CCDC12-210ENST00000604181 HOXC9P31274 260 aa23.83■■□□□ 1.41
CCDC12-210ENST00000604181 PNPLA7Q6ZV29 1317 aa23.83■■□□□ 1.4
CCDC12-210ENST00000604181 DOT1LQ8TEK3 1739 aa23.82■■□□□ 1.4
CCDC12-210ENST00000604181 MAP3K5Q99683 1374 aa23.82■■□□□ 1.4
CCDC12-210ENST00000604181 ST20-MTHFSA0A0A6YYL1 179 aa23.82■■□□□ 1.4
CCDC12-210ENST00000604181 MEGF6O75095 1541 aa23.82■■□□□ 1.4
CCDC12-210ENST00000604181 PRIM1P49642 420 aaKnown RBP23.81■■□□□ 1.4
CCDC12-210ENST00000604181 QSER1Q2KHR3 1735 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms