RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 NFAT5O94916 1531 aa25.45■■□□□ 1.66
CCDC12-208ENST00000603885 NME9Q86XW9 330 aa25.44■■□□□ 1.66
CCDC12-208ENST00000603885 USP54Q70EL1 1684 aa25.44■■□□□ 1.66
CCDC12-208ENST00000603885 TMF1P82094 1093 aa25.42■■□□□ 1.66
CCDC12-208ENST00000603885 PDE3BQ13370 1112 aa25.42■■□□□ 1.66
CCDC12-208ENST00000603885 AXIN2Q9Y2T1 843 aa25.42■■□□□ 1.66
CCDC12-208ENST00000603885 RGPD1P0DJD0 1748 aa25.42■■□□□ 1.66
CCDC12-208ENST00000603885 BAG6P46379 1132 aa25.41■■□□□ 1.66
CCDC12-208ENST00000603885 TOM1L2Q6ZVM7 507 aa25.41■■□□□ 1.66
CCDC12-208ENST00000603885 WDR17Q8IZU2 1322 aa25.4■■□□□ 1.66
CCDC12-208ENST00000603885 FAM196AQ6ZSG2 479 aa25.4■■□□□ 1.66
CCDC12-208ENST00000603885 ABCC6O95255 1503 aa25.39■■□□□ 1.66
CCDC12-208ENST00000603885 PARP4Q9UKK3 1724 aaKnown RBP25.38■■□□□ 1.65
CCDC12-208ENST00000603885 RGPD5Q99666 1765 aa25.37■■□□□ 1.65
CCDC12-208ENST00000603885 CSB-PGBD3P0DP91 1061 aa25.36■■□□□ 1.65
CCDC12-208ENST00000603885 CDCA8Q53HL2 280 aa25.35■■□□□ 1.65
CCDC12-208ENST00000603885 CCER1Q8TC90 406 aaPredicted RBP25.35■■□□□ 1.65
CCDC12-208ENST00000603885 OVOS2A0A0J9YW53 1432 aa25.35■■□□□ 1.65
CCDC12-208ENST00000603885 OVOS2Q6IE36 1432 aa25.35■■□□□ 1.65
CCDC12-208ENST00000603885 ANKRD36BQ8N2N9 1353 aa25.34■■□□□ 1.65
CCDC12-208ENST00000603885 TNS1Q9HBL0 1735 aaKnown RBP25.34■■□□□ 1.65
CCDC12-208ENST00000603885 DISP2A7MBM2 1401 aa25.32■■□□□ 1.64
CCDC12-208ENST00000603885 LTN1O94822 1766 aa25.32■■□□□ 1.64
CCDC12-208ENST00000603885 TRIM37O94972 964 aa25.32■■□□□ 1.64
CCDC12-208ENST00000603885 CARD10Q9BWT7 1032 aa25.32■■□□□ 1.64
CCDC12-208ENST00000603885 WNK3Q9BYP7 1800 aa25.31■■□□□ 1.64
CCDC12-208ENST00000603885 EN1Q05925 392 aaPredicted RBP25.31■■□□□ 1.64
CCDC12-208ENST00000603885 CDCA7Q9BWT1 371 aaPredicted RBP25.31■■□□□ 1.64
CCDC12-208ENST00000603885 LRRC37A3O60309 1634 aa25.3■■□□□ 1.64
CCDC12-208ENST00000603885 DDB1Q16531 1140 aa25.3■■□□□ 1.64
CCDC12-208ENST00000603885 SRCAPQ6ZRS2 3230 aa25.29■■□□□ 1.64
CCDC12-208ENST00000603885 C11orf95C9JLR9 678 aaPredicted RBP25.29■■□□□ 1.64
CCDC12-208ENST00000603885 COG3Q96JB2 828 aa25.29■■□□□ 1.64
CCDC12-208ENST00000603885 CCDC7Q96M83 1385 aa25.29■■□□□ 1.64
CCDC12-208ENST00000603885 ERBB3P21860 1342 aa25.27■■□□□ 1.64
CCDC12-208ENST00000603885 OVOS2A0A0G2JMS6 1433 aa25.27■■□□□ 1.64
CCDC12-208ENST00000603885 APBA3O96018 575 aa25.25■■□□□ 1.63
CCDC12-208ENST00000603885 PEAK1Q9H792 1746 aa25.23■■□□□ 1.63
CCDC12-208ENST00000603885 ANKRD24Q8TF21 1146 aa25.23■■□□□ 1.63
CCDC12-208ENST00000603885 NLRP2Q9NX02 1062 aa25.23■■□□□ 1.63
CCDC12-208ENST00000603885 PARD3Q8TEW0 1356 aa25.22■■□□□ 1.63
CCDC12-208ENST00000603885 EZH2Q15910 746 aaKnown RBP25.22■■□□□ 1.63
CCDC12-208ENST00000603885 CAMKK2Q96RR4 588 aa25.22■■□□□ 1.63
CCDC12-208ENST00000603885 IP6K1Q92551 441 aa25.21■■□□□ 1.63
CCDC12-208ENST00000603885 MYOM1P52179 1685 aa25.2■■□□□ 1.62
CCDC12-208ENST00000603885 EXOC5O00471 708 aa25.19■■□□□ 1.62
CCDC12-208ENST00000603885 FYB1O15117 783 aa25.19■■□□□ 1.62
CCDC12-208ENST00000603885 MAP3K19Q56UN5 1328 aa25.18■■□□□ 1.62
CCDC12-208ENST00000603885 MARCH10Q8NA82 808 aaPredicted RBP25.18■■□□□ 1.62
CCDC12-208ENST00000603885 GGNBP2Q9H3C7 697 aa25.18■■□□□ 1.62
CCDC12-208ENST00000603885 TNS2Q63HR2 1409 aa25.17■■□□□ 1.62
CCDC12-208ENST00000603885 KIF20BQ96Q89 1820 aa25.16■■□□□ 1.62
CCDC12-208ENST00000603885 PSDA5PKW4 1024 aaPredicted RBP25.16■■□□□ 1.62
CCDC12-208ENST00000603885 BCL9O00512 1426 aa25.16■■□□□ 1.62
CCDC12-208ENST00000603885 AMPHP49418 695 aa25.16■■□□□ 1.62
CCDC12-208ENST00000603885 EIF4G2P78344 907 aaKnown RBP eCLIP25.16■■□□□ 1.621e-7■□□□□ 8.4
CCDC12-208ENST00000603885 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
CCDC12-208ENST00000603885 IL2RBP14784 551 aa25.15■■□□□ 1.62
CCDC12-208ENST00000603885 FAM208AQ9UK61 1670 aaKnown RBP25.15■■□□□ 1.62
CCDC12-208ENST00000603885 FBLN1P23142 703 aa25.14■■□□□ 1.62
CCDC12-208ENST00000603885 HOXC9P31274 260 aa25.14■■□□□ 1.62
CCDC12-208ENST00000603885 LTV1Q96GA3 475 aaPredicted RBP25.14■■□□□ 1.62
CCDC12-208ENST00000603885 RREB1Q92766 1687 aa25.13■■□□□ 1.61
CCDC12-208ENST00000603885 NSD3Q9BZ95 1437 aa25.13■■□□□ 1.61
CCDC12-208ENST00000603885 RTL1A6NKG5 1358 aa25.13■■□□□ 1.61
CCDC12-208ENST00000603885 CARD14Q9BXL6 1004 aa25.12■■□□□ 1.61
CCDC12-208ENST00000603885 BCL11BQ9C0K0 894 aaPredicted RBP25.12■■□□□ 1.61
CCDC12-208ENST00000603885 HSPA5P11021 654 aaKnown RBP25.11■■□□□ 1.61
CCDC12-208ENST00000603885 R3HDM1Q15032 1099 aaKnown RBP25.11■■□□□ 1.61
CCDC12-208ENST00000603885 RRS1Q15050 365 aaKnown RBP25.11■■□□□ 1.61
CCDC12-208ENST00000603885 POLR3GLQ9BT43 218 aa25.11■■□□□ 1.61
CCDC12-208ENST00000603885 NUP188Q5SRE5 1749 aa25.09■■□□□ 1.61
CCDC12-208ENST00000603885 RGPD3A6NKT7 1758 aaPredicted RBP25.09■■□□□ 1.61
CCDC12-208ENST00000603885 RGPD4Q7Z3J3 1758 aa25.09■■□□□ 1.61
CCDC12-208ENST00000603885 PLSCR1O15162 318 aa25.07■■□□□ 1.6
CCDC12-208ENST00000603885 PTF1AQ7RTS3 328 aa25.07■■□□□ 1.6
CCDC12-208ENST00000603885 LRP5O75197 1615 aa25.06■■□□□ 1.6
CCDC12-208ENST00000603885 NBPF14Q5TI25 921 aa25.06■■□□□ 1.6
CCDC12-208ENST00000603885 SMG6Q86US8 1419 aaKnown RBP25.05■■□□□ 1.6
CCDC12-208ENST00000603885 CGNL1Q0VF96 1302 aa25.05■■□□□ 1.6
CCDC12-208ENST00000603885 KIF24Q5T7B8 1368 aa25.04■■□□□ 1.6
CCDC12-208ENST00000603885 FLT4P35916 1363 aa25.03■■□□□ 1.6
CCDC12-208ENST00000603885 RGPD2P0DJD1 1756 aa25.02■■□□□ 1.6
CCDC12-208ENST00000603885 INSRP06213 1382 aa25.02■■□□□ 1.6
CCDC12-208ENST00000603885 NHSQ6T4R5 1651 aa25.01■■□□□ 1.59
CCDC12-208ENST00000603885 KCNQ2O43526 872 aa24.99■■□□□ 1.59
CCDC12-208ENST00000603885 HSP90AB2PQ58FF8 381 aa24.99■■□□□ 1.59
CCDC12-208ENST00000603885 ACSBG1Q96GR2 724 aa24.99■■□□□ 1.59
CCDC12-208ENST00000603885 NBPF6Q5VWK0 638 aa24.98■■□□□ 1.59
CCDC12-208ENST00000603885 DDX54Q8TDD1 881 aaKnown RBP24.98■■□□□ 1.59
CCDC12-208ENST00000603885 NBPF4Q96M43 638 aa24.98■■□□□ 1.59
CCDC12-208ENST00000603885 EMILIN1Q9Y6C2 1016 aa24.97■■□□□ 1.59
CCDC12-208ENST00000603885 MEGF6O75095 1541 aa24.96■■□□□ 1.59
CCDC12-208ENST00000603885 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.58
CCDC12-208ENST00000603885 PANK3Q9H999 370 aa24.95■■□□□ 1.58
CCDC12-208ENST00000603885 KAT6BQ8WYB5 2073 aa24.94■■□□□ 1.58
CCDC12-208ENST00000603885 PPM1GO15355 546 aaPredicted RBP24.94■■□□□ 1.58
CCDC12-208ENST00000603885 TXNRD1Q16881 649 aa24.94■■□□□ 1.58
CCDC12-208ENST00000603885 PROM2Q8N271 834 aa24.94■■□□□ 1.58
CCDC12-208ENST00000603885 ZCRB1Q8TBF4 217 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms