RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 GABBR1Q9UBS5 961 aa5.96□□□□□ -1.45
LINC01109-201ENST00000603837 RAD54L2Q9Y4B4 1467 aa5.96□□□□□ -1.46
LINC01109-201ENST00000603837 RAPGEF2Q9Y4G8 1499 aa5.96□□□□□ -1.46
LINC01109-201ENST00000603837 RHBDL3P58872 404 aa5.96□□□□□ -1.46
LINC01109-201ENST00000603837 PNMA3Q9UL41 463 aa5.96□□□□□ -1.46
LINC01109-201ENST00000603837 ARAP1Q96P48 1450 aa5.96□□□□□ -1.46
LINC01109-201ENST00000603837 FRAT2O75474 233 aaPredicted RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 NUDT18Q6ZVK8 323 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 TATDN2Q93075 761 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 KIAA1522Q9P206 1035 aaPredicted RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 SMAPO00193 183 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 DNTTIP2Q5QJE6 756 aaKnown RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 SEPT9Q9UHD8 586 aaPredicted RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 ADGRG1Q9Y653 693 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 SYNJ2O15056 1496 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 ABCA10Q8WWZ4 1543 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 TDRD9Q8NDG6 1382 aaKnown RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 BHMG1C9JSJ3 638 aaPredicted RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 C3orf80F5H4A9 247 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 HRO43593 1189 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 TSHZ1Q6ZSZ6 1077 aa5.95□□□□□ -1.46
LINC01109-201ENST00000603837 MRPL50Q8N5N7 158 aaKnown RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 HIRIP3Q9BW71 556 aaPredicted RBP5.95□□□□□ -1.46
LINC01109-201ENST00000603837 GRIN2BQ13224 1484 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 MAP3K1Q13233 1512 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 TRAK2O60296 914 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 OATP04181 439 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 CCDC96Q2M329 555 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 GPATCH3Q96I76 525 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 MTA3Q9BTC8 594 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 FGD5Q6ZNL6 1462 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 KIF20AO95235 890 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 ZNF513Q8N8E2 541 aaPredicted RBP5.94□□□□□ -1.46
LINC01109-201ENST00000603837 RBM46Q8TBY0 533 aaKnown RBP5.94□□□□□ -1.46
LINC01109-201ENST00000603837 CCDC102AQ96A19 550 aa5.94□□□□□ -1.46
LINC01109-201ENST00000603837 RRBP1Q9P2E9 1410 aaKnown RBP5.94□□□□□ -1.46
LINC01109-201ENST00000603837 MMP14P50281 582 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 MYBPC2Q14324 1141 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 KIAA1211Q6ZU35 1233 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 ARID4AP29374 1257 aaPredicted RBP5.93□□□□□ -1.46
LINC01109-201ENST00000603837 ZFYVE27Q5T4F4 411 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 METTL3Q86U44 580 aaKnown RBP5.93□□□□□ -1.46
LINC01109-201ENST00000603837 EGFL6Q8IUX8 553 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 NGEFQ8N5V2 710 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 IGSF5Q9NSI5 407 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 ESPNB1AK53 854 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 TAF3Q5VWG9 929 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.93□□□□□ -1.46
LINC01109-201ENST00000603837 PXYLP1Q8TE99 480 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 EYA1Q99502 592 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 FAM13BQ9NYF5 915 aa5.93□□□□□ -1.46
LINC01109-201ENST00000603837 TCERG1O14776 1098 aaKnown RBP5.92□□□□□ -1.46
LINC01109-201ENST00000603837 MAPKBP1O60336 1514 aa5.92□□□□□ -1.46
LINC01109-201ENST00000603837 CCDC181Q5TID7 509 aa5.92□□□□□ -1.46
LINC01109-201ENST00000603837 MTERF4Q7Z6M4 381 aaKnown RBP5.92□□□□□ -1.46
LINC01109-201ENST00000603837 AK7Q96M32 723 aa5.92□□□□□ -1.46
LINC01109-201ENST00000603837 DHX57Q6P158 1386 aaKnown RBP5.92□□□□□ -1.46
LINC01109-201ENST00000603837 PPP1R15AO75807 674 aaPredicted RBP5.92□□□□□ -1.46
LINC01109-201ENST00000603837 FAM98CQ17RN3 349 aaKnown RBP5.92□□□□□ -1.46
LINC01109-201ENST00000603837 SIN3AQ96ST3 1273 aa5.92□□□□□ -1.46
LINC01109-201ENST00000603837 POGKQ9P215 609 aa5.92□□□□□ -1.46
LINC01109-201ENST00000603837 ADAMTS12P58397 1594 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 POLA1P09884 1462 aaPredicted RBP5.91□□□□□ -1.46
LINC01109-201ENST00000603837 EPB41L2O43491 1005 aaKnown RBP5.91□□□□□ -1.46
LINC01109-201ENST00000603837 LETM1O95202 739 aaPredicted RBP5.91□□□□□ -1.46
LINC01109-201ENST00000603837 CC2D1BQ5T0F9 858 aaKnown RBP5.91□□□□□ -1.46
LINC01109-201ENST00000603837 KRBA2Q6ZNG9 492 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 LAPTM4BQ86VI4 370 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 TTC36A6NLP5 189 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 GOLGA8CPA6NN73 597 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 SH3BP5O60239 455 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 PARNO95453 639 aaKnown RBP5.91□□□□□ -1.46
LINC01109-201ENST00000603837 RIPK4P57078 832 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 POM121Q96HA1 1249 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 BACH2Q9BYV9 841 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 GTPBP4Q9BZE4 634 aaKnown RBP5.91□□□□□ -1.46
LINC01109-201ENST00000603837 CFAP43Q8NDM7 1665 aa5.91□□□□□ -1.46
LINC01109-201ENST00000603837 GOLGA6CA6NDK9 693 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 GOLGA6BA6NDN3 693 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 GOLGA6DP0CG33 693 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 ZSCAN20P17040 1043 aaPredicted RBP5.9□□□□□ -1.46
LINC01109-201ENST00000603837 PIK3R5Q8WYR1 880 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 PMM1Q92871 262 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 ZFRQ96KR1 1074 aaKnown RBP5.9□□□□□ -1.46
LINC01109-201ENST00000603837 GOLGA6AQ9NYA3 693 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 NUP160Q12769 1436 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 GLI2P10070 1586 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 RCCD1A6NED2 376 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 CT47B1P0C2W7 299 aaPredicted RBP5.9□□□□□ -1.46
LINC01109-201ENST00000603837 XRCC6P12956 609 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC01109-201ENST00000603837 SLC4A3P48751 1232 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 NBPF1Q3BBV0 1214 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 NBPF11Q86T75 865 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 PHOX2BQ99453 314 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 CDCA7Q9BWT1 371 aaPredicted RBP5.9□□□□□ -1.46
LINC01109-201ENST00000603837 KDM4CQ9H3R0 1056 aa5.9□□□□□ -1.46
LINC01109-201ENST00000603837 KIF27Q86VH2 1401 aa5.9□□□□□ -1.47
LINC01109-201ENST00000603837 ZC3H4Q9UPT8 1303 aaKnown RBP5.9□□□□□ -1.47
LINC01109-201ENST00000603837 GOLGA6L3A6NEY3 463 aa5.9□□□□□ -1.47
LINC01109-201ENST00000603837 DNAJB2P25686 324 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms