RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 AATKQ6ZMQ8 1374 aa29.58■■■□□ 2.33
PPFIA3-212ENST00000602897 TTC21AQ8NDW8 1320 aa29.57■■■□□ 2.32
PPFIA3-212ENST00000602897 COG3Q96JB2 828 aa29.57■■■□□ 2.32
PPFIA3-212ENST00000602897 GJD4Q96KN9 370 aaPredicted RBP29.57■■■□□ 2.32
PPFIA3-212ENST00000602897 RGS12O14924 1447 aa29.57■■■□□ 2.32
PPFIA3-212ENST00000602897 SSH2Q76I76 1423 aa29.57■■■□□ 2.32
PPFIA3-212ENST00000602897 NME9Q86XW9 330 aa29.55■■■□□ 2.32
PPFIA3-212ENST00000602897 BTG4Q9NY30 223 aa29.55■■■□□ 2.32
PPFIA3-212ENST00000602897 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.55■■■□□ 2.32
PPFIA3-212ENST00000602897 PLCH1Q4KWH8 1693 aa29.55■■■□□ 2.32
PPFIA3-212ENST00000602897 USP19O94966 1318 aa29.54■■■□□ 2.32
PPFIA3-212ENST00000602897 NLRP6P59044 892 aa29.54■■■□□ 2.32
PPFIA3-212ENST00000602897 ZC3H6P61129 1189 aaKnown RBP29.54■■■□□ 2.32
PPFIA3-212ENST00000602897 KIAA0232Q92628 1395 aa29.54■■■□□ 2.32
PPFIA3-212ENST00000602897 NUDCQ9Y266 331 aa29.53■■■□□ 2.32
PPFIA3-212ENST00000602897 PHRF1Q9P1Y6 1649 aaKnown RBP29.53■■■□□ 2.32
PPFIA3-212ENST00000602897 NWD2Q9ULI1 1742 aa29.52■■■□□ 2.32
PPFIA3-212ENST00000602897 VPS72Q15906 364 aa29.52■■■□□ 2.32
PPFIA3-212ENST00000602897 COL14A1Q05707 1796 aaKnown RBP29.52■■■□□ 2.32
PPFIA3-212ENST00000602897 CCDC9Q9Y3X0 531 aaKnown RBP29.51■■■□□ 2.31
PPFIA3-212ENST00000602897 CHRNA2Q15822 529 aa29.5■■■□□ 2.31
PPFIA3-212ENST00000602897 COL3A1P02461 1466 aaPredicted RBP29.5■■■□□ 2.31
PPFIA3-212ENST00000602897 GCP02774 474 aa29.49■■■□□ 2.31
PPFIA3-212ENST00000602897 POLKQ9UBT6 870 aa29.49■■■□□ 2.31
PPFIA3-212ENST00000602897 NCBP3Q53F19 620 aaKnown RBP29.48■■■□□ 2.31
PPFIA3-212ENST00000602897 USP31Q70CQ4 1352 aa29.47■■■□□ 2.31
PPFIA3-212ENST00000602897 NEFLP07196 543 aa29.46■■■□□ 2.31
PPFIA3-212ENST00000602897 RUNDC1Q96C34 613 aa29.46■■■□□ 2.31
PPFIA3-212ENST00000602897 OVOS2A0A0J9YW53 1432 aa29.46■■■□□ 2.31
PPFIA3-212ENST00000602897 OVOS2Q6IE36 1432 aa29.46■■■□□ 2.31
PPFIA3-212ENST00000602897 PIK3C2AO00443 1686 aa29.45■■■□□ 2.31
PPFIA3-212ENST00000602897 GLI3P10071 1580 aa29.45■■■□□ 2.3
PPFIA3-212ENST00000602897 CPDO75976 1380 aa29.44■■■□□ 2.3
PPFIA3-212ENST00000602897 DIAPH1O60610 1272 aaKnown RBP29.44■■■□□ 2.3
PPFIA3-212ENST00000602897 MAP2P11137 1827 aaKnown RBP29.44■■■□□ 2.3
PPFIA3-212ENST00000602897 NRAPQ86VF7 1730 aa29.43■■■□□ 2.3
PPFIA3-212ENST00000602897 PNNQ9H307 717 aaKnown RBP29.42■■■□□ 2.3
PPFIA3-212ENST00000602897 ZRANB1Q9UGI0 708 aa29.42■■■□□ 2.3
PPFIA3-212ENST00000602897 ZNF521Q96K83 1311 aa29.41■■■□□ 2.3
PPFIA3-212ENST00000602897 CCDC146Q8IYE0 955 aa29.41■■■□□ 2.3
PPFIA3-212ENST00000602897 SUPT16HQ9Y5B9 1047 aaKnown RBP29.41■■■□□ 2.3
PPFIA3-212ENST00000602897 SLIT3O75094 1523 aa29.4■■■□□ 2.3
PPFIA3-212ENST00000602897 U2AF1L5P0DN76 240 aaPredicted RBP29.4■■■□□ 2.3
PPFIA3-212ENST00000602897 U2AF1Q01081 240 aaKnown RBP eCLIP29.4■■■□□ 2.3
PPFIA3-212ENST00000602897 STRN4Q9NRL3 753 aa29.4■■■□□ 2.3
PPFIA3-212ENST00000602897 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
PPFIA3-212ENST00000602897 ZBTB7CA1YPR0 619 aa29.39■■■□□ 2.3
PPFIA3-212ENST00000602897 APAF1O14727 1248 aa29.39■■■□□ 2.3
PPFIA3-212ENST00000602897 UPF1Q92900 1129 aaKnown RBP eCLIP29.38■■■□□ 2.292e-7■■■■□ 24.6
PPFIA3-212ENST00000602897 KCNH5Q8NCM2 988 aa29.37■■■□□ 2.29
PPFIA3-212ENST00000602897 SPATA31A5Q5VU36 1347 aa29.36■■■□□ 2.29
PPFIA3-212ENST00000602897 SPATA31A7Q8IWB4 1347 aa29.36■■■□□ 2.29
PPFIA3-212ENST00000602897 USP54Q70EL1 1684 aa29.36■■■□□ 2.29
PPFIA3-212ENST00000602897 SENP3-EIF4A1A0A087X0R7 540 aa29.36■■■□□ 2.29
PPFIA3-212ENST00000602897 SOX12O15370 315 aa29.36■■■□□ 2.29
PPFIA3-212ENST00000602897 EVA1CP58658 441 aa29.36■■■□□ 2.29
PPFIA3-212ENST00000602897 SEPT12Q8IYM1 358 aa29.36■■■□□ 2.29
PPFIA3-212ENST00000602897 ONECUT3O60422 494 aaPredicted RBP29.34■■■□□ 2.29
PPFIA3-212ENST00000602897 A0A0G2JS52 829 aa29.34■■■□□ 2.29
PPFIA3-212ENST00000602897 MYT1Q01538 1121 aa29.34■■■□□ 2.29
PPFIA3-212ENST00000602897 GOLGA2Q08379 1002 aa29.34■■■□□ 2.29
PPFIA3-212ENST00000602897 FAM98CQ17RN3 349 aaKnown RBP29.34■■■□□ 2.29
PPFIA3-212ENST00000602897 EMILIN1Q9Y6C2 1016 aa29.34■■■□□ 2.29
PPFIA3-212ENST00000602897 CAMTA1Q9Y6Y1 1673 aa29.34■■■□□ 2.29
PPFIA3-212ENST00000602897 U2SURPO15042 1029 aaKnown RBP29.32■■■□□ 2.28
PPFIA3-212ENST00000602897 FCHSD2O94868 740 aa29.32■■■□□ 2.28
PPFIA3-212ENST00000602897 PPM1GO15355 546 aaPredicted RBP29.31■■■□□ 2.28
PPFIA3-212ENST00000602897 CCDC27Q2M243 656 aa29.31■■■□□ 2.28
PPFIA3-212ENST00000602897 LMO7Q8WWI1 1683 aa29.31■■■□□ 2.28
PPFIA3-212ENST00000602897 ERICH6BQ5W0A0 696 aa29.31■■■□□ 2.28
PPFIA3-212ENST00000602897 TCP11L2Q8N4U5 519 aa29.31■■■□□ 2.28
PPFIA3-212ENST00000602897 SPATA31A1Q5TZJ5 1347 aa29.3■■■□□ 2.28
PPFIA3-212ENST00000602897 FBLN1P23142 703 aa29.3■■■□□ 2.28
PPFIA3-212ENST00000602897 FKBP8Q14318 412 aa29.3■■■□□ 2.28
PPFIA3-212ENST00000602897 ARHGEF25Q86VW2 580 aa29.3■■■□□ 2.28
PPFIA3-212ENST00000602897 IL13P35225 146 aa29.29■■■□□ 2.28
PPFIA3-212ENST00000602897 LARP1Q6PKG0 1096 aaKnown RBP29.28■■■□□ 2.28
PPFIA3-212ENST00000602897 CDCA7LQ96GN5 454 aa29.28■■■□□ 2.28
PPFIA3-212ENST00000602897 PLEKHF1Q96S99 279 aa29.28■■■□□ 2.28
PPFIA3-212ENST00000602897 USP35Q9P2H5 1018 aa29.28■■■□□ 2.28
PPFIA3-212ENST00000602897 RNF123Q5XPI4 1314 aa29.28■■■□□ 2.28
PPFIA3-212ENST00000602897 RRS1Q15050 365 aaKnown RBP29.27■■■□□ 2.28
PPFIA3-212ENST00000602897 KIF24Q5T7B8 1368 aa29.27■■■□□ 2.28
PPFIA3-212ENST00000602897 COL5A2P05997 1499 aaPredicted RBP29.26■■■□□ 2.27
PPFIA3-212ENST00000602897 NFAT5O94916 1531 aa29.26■■■□□ 2.27
PPFIA3-212ENST00000602897 SLFN5Q08AF3 891 aa29.25■■■□□ 2.27
PPFIA3-212ENST00000602897 TRMT2AQ8IZ69 625 aaKnown RBP29.25■■■□□ 2.27
PPFIA3-212ENST00000602897 E9PSI1 815 aa29.24■■■□□ 2.27
PPFIA3-212ENST00000602897 WWC1Q8IX03 1113 aa29.24■■■□□ 2.27
PPFIA3-212ENST00000602897 AXIN2Q9Y2T1 843 aa29.24■■■□□ 2.27
PPFIA3-212ENST00000602897 MAPK8IP3Q9UPT6 1336 aa29.24■■■□□ 2.27
PPFIA3-212ENST00000602897 KRT27Q7Z3Y8 459 aa29.23■■■□□ 2.27
PPFIA3-212ENST00000602897 WDR63Q8IWG1 891 aa29.23■■■□□ 2.27
PPFIA3-212ENST00000602897 NEFMP07197 916 aa29.22■■■□□ 2.27
PPFIA3-212ENST00000602897 DUSP27Q5VZP5 1158 aa29.21■■■□□ 2.27
PPFIA3-212ENST00000602897 BRWD3Q6RI45 1802 aa29.21■■■□□ 2.27
PPFIA3-212ENST00000602897 EP400Q96L91 3159 aa29.2■■■□□ 2.27
PPFIA3-212ENST00000602897 RCAN3Q9UKA8 241 aa29.2■■■□□ 2.27
PPFIA3-212ENST00000602897 RSPH6AQ9H0K4 717 aa29.2■■■□□ 2.26
PPFIA3-212ENST00000602897 COL18A1P39060 1754 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms