RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 TTC21BQ7Z4L5 1316 aa27.49■■□□□ 1.99
PPFIA3-210ENST00000602800 CSB-PGBD3P0DP91 1061 aa27.49■■□□□ 1.99
PPFIA3-210ENST00000602800 CPSF1Q10570 1443 aaKnown RBP27.49■■□□□ 1.99
PPFIA3-210ENST00000602800 SOX12O15370 315 aa27.48■■□□□ 1.99
PPFIA3-210ENST00000602800 DCAF8L1A6NGE4 600 aa27.47■■□□□ 1.99
PPFIA3-210ENST00000602800 ROCK2O75116 1388 aaKnown RBP27.47■■□□□ 1.99
PPFIA3-210ENST00000602800 TTC21AQ8NDW8 1320 aa27.46■■□□□ 1.99
PPFIA3-210ENST00000602800 MARCH10Q8NA82 808 aaPredicted RBP27.46■■□□□ 1.99
PPFIA3-210ENST00000602800 YY1P25490 414 aa27.45■■□□□ 1.98
PPFIA3-210ENST00000602800 CARD10Q9BWT7 1032 aa27.45■■□□□ 1.98
PPFIA3-210ENST00000602800 LRRC37A3O60309 1634 aa27.45■■□□□ 1.98
PPFIA3-210ENST00000602800 PEAK1Q9H792 1746 aa27.44■■□□□ 1.98
PPFIA3-210ENST00000602800 PIK3C2AO00443 1686 aa27.44■■□□□ 1.98
PPFIA3-210ENST00000602800 PTF1AQ7RTS3 328 aa27.44■■□□□ 1.98
PPFIA3-210ENST00000602800 ANO8Q9HCE9 1232 aaPredicted RBP27.43■■□□□ 1.98
PPFIA3-210ENST00000602800 NINLQ9Y2I6 1382 aa27.43■■□□□ 1.98
PPFIA3-210ENST00000602800 BCL9O00512 1426 aa27.42■■□□□ 1.98
PPFIA3-210ENST00000602800 EXOC5O00471 708 aa27.42■■□□□ 1.98
PPFIA3-210ENST00000602800 SIN3AQ96ST3 1273 aa27.42■■□□□ 1.98
PPFIA3-210ENST00000602800 TRPM1Q7Z4N2 1603 aa27.41■■□□□ 1.98
PPFIA3-210ENST00000602800 COL18A1P39060 1754 aa27.4■■□□□ 1.98
PPFIA3-210ENST00000602800 KTN1Q86UP2 1357 aaKnown RBP27.4■■□□□ 1.98
PPFIA3-210ENST00000602800 NEUROD1Q13562 356 aa27.4■■□□□ 1.98
PPFIA3-210ENST00000602800 PROM2Q8N271 834 aa27.39■■□□□ 1.98
PPFIA3-210ENST00000602800 RGPD3A6NKT7 1758 aaPredicted RBP27.38■■□□□ 1.97
PPFIA3-210ENST00000602800 RGPD4Q7Z3J3 1758 aa27.38■■□□□ 1.97
PPFIA3-210ENST00000602800 CCDC7Q96M83 1385 aa27.37■■□□□ 1.97
PPFIA3-210ENST00000602800 TXNRD1Q16881 649 aa27.35■■□□□ 1.97
PPFIA3-210ENST00000602800 STK32BQ9NY57 414 aa27.35■■□□□ 1.97
PPFIA3-210ENST00000602800 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.34■■□□□ 1.97
PPFIA3-210ENST00000602800 SBF2Q86WG5 1849 aa27.34■■□□□ 1.97
PPFIA3-210ENST00000602800 ZBTB7AO95365 584 aa27.33■■□□□ 1.97
PPFIA3-210ENST00000602800 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
PPFIA3-210ENST00000602800 PDGFDQ9GZP0 370 aaPredicted RBP27.32■■□□□ 1.96
PPFIA3-210ENST00000602800 NFAT5O94916 1531 aa27.31■■□□□ 1.96
PPFIA3-210ENST00000602800 SLC15A2Q16348 729 aa27.3■■□□□ 1.96
PPFIA3-210ENST00000602800 NLRP2Q9NX02 1062 aa27.3■■□□□ 1.96
PPFIA3-210ENST00000602800 USP31Q70CQ4 1352 aa27.29■■□□□ 1.96
PPFIA3-210ENST00000602800 TNS2Q63HR2 1409 aa27.29■■□□□ 1.96
PPFIA3-210ENST00000602800 ABCC6O95255 1503 aa27.29■■□□□ 1.96
PPFIA3-210ENST00000602800 AKAP12Q02952 1782 aa27.29■■□□□ 1.96
PPFIA3-210ENST00000602800 WNK3Q9BYP7 1800 aa27.29■■□□□ 1.96
PPFIA3-210ENST00000602800 SBNO2Q9Y2G9 1366 aa27.28■■□□□ 1.96
PPFIA3-210ENST00000602800 ATF5Q9Y2D1 282 aaPredicted RBP27.28■■□□□ 1.96
PPFIA3-210ENST00000602800 ERBB3P21860 1342 aa27.27■■□□□ 1.96
PPFIA3-210ENST00000602800 NME9Q86XW9 330 aa27.27■■□□□ 1.96
PPFIA3-210ENST00000602800 TMC1Q8TDI8 760 aa27.27■■□□□ 1.96
PPFIA3-210ENST00000602800 HDGFL2Q7Z4V5 671 aaPredicted RBP27.26■■□□□ 1.95
PPFIA3-210ENST00000602800 CARD11Q9BXL7 1154 aa27.26■■□□□ 1.95
PPFIA3-210ENST00000602800 IL2RBP14784 551 aa27.25■■□□□ 1.95
PPFIA3-210ENST00000602800 PTGER2P43116 358 aa27.25■■□□□ 1.95
PPFIA3-210ENST00000602800 ACSBG1Q96GR2 724 aa27.25■■□□□ 1.95
PPFIA3-210ENST00000602800 CASZ1Q86V15 1759 aa27.25■■□□□ 1.95
PPFIA3-210ENST00000602800 RGPD5Q99666 1765 aa27.24■■□□□ 1.95
PPFIA3-210ENST00000602800 ANKRD24Q8TF21 1146 aa27.22■■□□□ 1.95
PPFIA3-210ENST00000602800 MTFR1LQ9H019 292 aa27.22■■□□□ 1.95
PPFIA3-210ENST00000602800 SLC12A5Q9H2X9 1139 aa27.2■■□□□ 1.94
PPFIA3-210ENST00000602800 TERF2IPQ9NYB0 399 aa27.2■■□□□ 1.94
PPFIA3-210ENST00000602800 CD163L1Q9NR16 1453 aa27.19■■□□□ 1.94
PPFIA3-210ENST00000602800 MON2Q7Z3U7 1717 aa27.19■■□□□ 1.94
PPFIA3-210ENST00000602800 FHDC1Q9C0D6 1143 aaPredicted RBP27.18■■□□□ 1.94
PPFIA3-210ENST00000602800 EDC4Q6P2E9 1401 aaKnown RBP27.17■■□□□ 1.94
PPFIA3-210ENST00000602800 SYT17Q9BSW7 474 aa27.17■■□□□ 1.94
PPFIA3-210ENST00000602800 MYOM1P52179 1685 aa27.14■■□□□ 1.93
PPFIA3-210ENST00000602800 NHSQ6T4R5 1651 aa27.14■■□□□ 1.93
PPFIA3-210ENST00000602800 PUS7Q96PZ0 661 aaKnown RBP27.13■■□□□ 1.93
PPFIA3-210ENST00000602800 SGIP1Q9BQI5 828 aa27.13■■□□□ 1.93
PPFIA3-210ENST00000602800 A0A1W2PP64 1363 aa27.12■■□□□ 1.93
PPFIA3-210ENST00000602800 USP54Q70EL1 1684 aa27.11■■□□□ 1.93
PPFIA3-210ENST00000602800 IP6K1Q92551 441 aa27.11■■□□□ 1.93
PPFIA3-210ENST00000602800 ARXQ96QS3 562 aa27.11■■□□□ 1.93
PPFIA3-210ENST00000602800 DDX54Q8TDD1 881 aaKnown RBP27.1■■□□□ 1.93
PPFIA3-210ENST00000602800 LTV1Q96GA3 475 aaPredicted RBP27.09■■□□□ 1.93
PPFIA3-210ENST00000602800 TONSLQ96HA7 1378 aa27.09■■□□□ 1.93
PPFIA3-210ENST00000602800 ZNF827Q17R98 1081 aa27.08■■□□□ 1.93
PPFIA3-210ENST00000602800 LRRC4BQ9NT99 713 aa27.08■■□□□ 1.93
PPFIA3-210ENST00000602800 UTRNP46939 3433 aa27.08■■□□□ 1.93
PPFIA3-210ENST00000602800 SLC27A3Q5K4L6 730 aa27.06■■□□□ 1.92
PPFIA3-210ENST00000602800 ZNF784Q8NCA9 323 aaPredicted RBP27.06■■□□□ 1.92
PPFIA3-210ENST00000602800 COG3Q96JB2 828 aa27.06■■□□□ 1.92
PPFIA3-210ENST00000602800 LTN1O94822 1766 aa27.06■■□□□ 1.92
PPFIA3-210ENST00000602800 PAPPAQ13219 1627 aa27.03■■□□□ 1.92
PPFIA3-210ENST00000602800 SYTL4Q96C24 671 aaPredicted RBP27.03■■□□□ 1.92
PPFIA3-210ENST00000602800 MAP3K5Q99683 1374 aa27.02■■□□□ 1.92
PPFIA3-210ENST00000602800 AMPHP49418 695 aa27.02■■□□□ 1.92
PPFIA3-210ENST00000602800 SLC16A10Q8TF71 515 aa27.02■■□□□ 1.92
PPFIA3-210ENST00000602800 AKT1S1Q96B36 256 aa27.02■■□□□ 1.92
PPFIA3-210ENST00000602800 BTAF1O14981 1849 aa27.02■■□□□ 1.92
PPFIA3-210ENST00000602800 SLC24A1O60721 1099 aa27.01■■□□□ 1.91
PPFIA3-210ENST00000602800 KAT6BQ8WYB5 2073 aa27.01■■□□□ 1.91
PPFIA3-210ENST00000602800 MAP3K19Q56UN5 1328 aa27■■□□□ 1.91
PPFIA3-210ENST00000602800 POLD1P28340 1107 aa27■■□□□ 1.91
PPFIA3-210ENST00000602800 HOXC9P31274 260 aa27■■□□□ 1.91
PPFIA3-210ENST00000602800 PRIM1P49642 420 aaKnown RBP26.99■■□□□ 1.91
PPFIA3-210ENST00000602800 TFCP2L1Q9NZI6 479 aa26.99■■□□□ 1.91
PPFIA3-210ENST00000602800 ST20-MTHFSA0A0A6YYL1 179 aa26.98■■□□□ 1.91
PPFIA3-210ENST00000602800 TESK2Q96S53 571 aa26.98■■□□□ 1.91
PPFIA3-210ENST00000602800 KLHL34Q8N239 644 aa26.97■■□□□ 1.91
PPFIA3-210ENST00000602800 ZCRB1Q8TBF4 217 aaKnown RBP26.97■■□□□ 1.91
PPFIA3-210ENST00000602800 ANKRD36BQ8N2N9 1353 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms