RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 PARP4Q9UKK3 1724 aaKnown RBP30.05■■■□□ 2.4
PPFIA3-209ENST00000602783 DDB1Q16531 1140 aa30.04■■■□□ 2.4
PPFIA3-209ENST00000602783 PARD3Q8TEW0 1356 aa30.03■■■□□ 2.4
PPFIA3-209ENST00000602783 C11orf95C9JLR9 678 aaPredicted RBP30.02■■■□□ 2.4
PPFIA3-209ENST00000602783 CSB-PGBD3P0DP91 1061 aa30.02■■■□□ 2.4
PPFIA3-209ENST00000602783 LRP5O75197 1615 aa30.01■■■□□ 2.39
PPFIA3-209ENST00000602783 SLC12A5Q9H2X9 1139 aa30.01■■■□□ 2.39
PPFIA3-209ENST00000602783 MON2Q7Z3U7 1717 aa30■■■□□ 2.39
PPFIA3-209ENST00000602783 HDGFL2Q7Z4V5 671 aaPredicted RBP29.99■■■□□ 2.39
PPFIA3-209ENST00000602783 NME9Q86XW9 330 aa29.98■■■□□ 2.39
PPFIA3-209ENST00000602783 CARD10Q9BWT7 1032 aa29.98■■■□□ 2.39
PPFIA3-209ENST00000602783 OVOS2A0A0G2JMS6 1433 aa29.97■■■□□ 2.39
PPFIA3-209ENST00000602783 OVOS2A0A0J9YW53 1432 aa29.97■■■□□ 2.39
PPFIA3-209ENST00000602783 OVOS2Q6IE36 1432 aa29.97■■■□□ 2.39
PPFIA3-209ENST00000602783 CDCA7Q9BWT1 371 aaPredicted RBP29.97■■■□□ 2.39
PPFIA3-209ENST00000602783 CD163L1Q9NR16 1453 aa29.97■■■□□ 2.39
PPFIA3-209ENST00000602783 NFAT5O94916 1531 aa29.96■■■□□ 2.39
PPFIA3-209ENST00000602783 RGPD5Q99666 1765 aa29.96■■■□□ 2.39
PPFIA3-209ENST00000602783 USP31Q70CQ4 1352 aa29.96■■■□□ 2.39
PPFIA3-209ENST00000602783 NBPF14Q5TI25 921 aa29.94■■■□□ 2.38
PPFIA3-209ENST00000602783 LRRC37A3O60309 1634 aa29.93■■■□□ 2.38
PPFIA3-209ENST00000602783 MARCH10Q8NA82 808 aaPredicted RBP29.93■■■□□ 2.38
PPFIA3-209ENST00000602783 PUS7Q96PZ0 661 aaKnown RBP29.93■■■□□ 2.38
PPFIA3-209ENST00000602783 TERF2IPQ9NYB0 399 aa29.93■■■□□ 2.38
PPFIA3-209ENST00000602783 PEAK1Q9H792 1746 aa29.91■■■□□ 2.38
PPFIA3-209ENST00000602783 ST20-MTHFSA0A0A6YYL1 179 aa29.9■■■□□ 2.38
PPFIA3-209ENST00000602783 RREB1Q92766 1687 aa29.9■■■□□ 2.38
PPFIA3-209ENST00000602783 EXOC5O00471 708 aa29.89■■■□□ 2.38
PPFIA3-209ENST00000602783 EDC4Q6P2E9 1401 aaKnown RBP29.88■■■□□ 2.37
PPFIA3-209ENST00000602783 PTF1AQ7RTS3 328 aa29.88■■■□□ 2.37
PPFIA3-209ENST00000602783 TESK2Q96S53 571 aa29.88■■■□□ 2.37
PPFIA3-209ENST00000602783 BCL11BQ9C0K0 894 aaPredicted RBP29.88■■■□□ 2.37
PPFIA3-209ENST00000602783 A0A1W2PP64 1363 aa29.88■■■□□ 2.37
PPFIA3-209ENST00000602783 CCDC7Q96M83 1385 aa29.88■■■□□ 2.37
PPFIA3-209ENST00000602783 PLSCR1O15162 318 aa29.87■■■□□ 2.37
PPFIA3-209ENST00000602783 NUP188Q5SRE5 1749 aa29.87■■■□□ 2.37
PPFIA3-209ENST00000602783 WNK3Q9BYP7 1800 aa29.87■■■□□ 2.37
PPFIA3-209ENST00000602783 USP54Q70EL1 1684 aa29.86■■■□□ 2.37
PPFIA3-209ENST00000602783 ABCC6O95255 1503 aa29.86■■■□□ 2.37
PPFIA3-209ENST00000602783 SBF2Q86WG5 1849 aa29.85■■■□□ 2.37
PPFIA3-209ENST00000602783 NLRP2Q9NX02 1062 aa29.85■■■□□ 2.37
PPFIA3-209ENST00000602783 ERBB3P21860 1342 aa29.84■■■□□ 2.37
PPFIA3-209ENST00000602783 SLC24A1O60721 1099 aa29.82■■■□□ 2.36
PPFIA3-209ENST00000602783 BCL9O00512 1426 aa29.81■■■□□ 2.36
PPFIA3-209ENST00000602783 ANKRD24Q8TF21 1146 aa29.81■■■□□ 2.36
PPFIA3-209ENST00000602783 NINLQ9Y2I6 1382 aa29.78■■■□□ 2.36
PPFIA3-209ENST00000602783 LTN1O94822 1766 aa29.78■■■□□ 2.36
PPFIA3-209ENST00000602783 PCGF6Q9BYE7 350 aa29.77■■■□□ 2.36
PPFIA3-209ENST00000602783 IL2RBP14784 551 aa29.76■■■□□ 2.35
PPFIA3-209ENST00000602783 PROM2Q8N271 834 aa29.76■■■□□ 2.35
PPFIA3-209ENST00000602783 TNS2Q63HR2 1409 aa29.75■■■□□ 2.35
PPFIA3-209ENST00000602783 COG3Q96JB2 828 aa29.75■■■□□ 2.35
PPFIA3-209ENST00000602783 USP47Q96K76 1375 aa29.75■■■□□ 2.35
PPFIA3-209ENST00000602783 IP6K1Q92551 441 aa29.74■■■□□ 2.35
PPFIA3-209ENST00000602783 RGPD3A6NKT7 1758 aaPredicted RBP29.74■■■□□ 2.35
PPFIA3-209ENST00000602783 RGPD4Q7Z3J3 1758 aa29.74■■■□□ 2.35
PPFIA3-209ENST00000602783 CLSPNQ9HAW4 1339 aa29.73■■■□□ 2.35
PPFIA3-209ENST00000602783 KCNQ2O43526 872 aa29.73■■■□□ 2.35
PPFIA3-209ENST00000602783 ANO8Q9HCE9 1232 aaPredicted RBP29.73■■■□□ 2.35
PPFIA3-209ENST00000602783 LTV1Q96GA3 475 aaPredicted RBP29.72■■■□□ 2.35
PPFIA3-209ENST00000602783 SPON1Q9HCB6 807 aa29.72■■■□□ 2.35
PPFIA3-209ENST00000602783 TMF1P82094 1093 aa29.71■■■□□ 2.35
PPFIA3-209ENST00000602783 ACSBG1Q96GR2 724 aa29.71■■■□□ 2.35
PPFIA3-209ENST00000602783 TXNRD1Q16881 649 aa29.7■■■□□ 2.35
PPFIA3-209ENST00000602783 FBLN1P23142 703 aa29.69■■■□□ 2.34
PPFIA3-209ENST00000602783 ANKRD36BQ8N2N9 1353 aa29.67■■■□□ 2.34
PPFIA3-209ENST00000602783 MAP3K19Q56UN5 1328 aa29.67■■■□□ 2.34
PPFIA3-209ENST00000602783 AMPHP49418 695 aa29.66■■■□□ 2.34
PPFIA3-209ENST00000602783 PPP1R1BQ9UD71 204 aaPredicted RBP29.66■■■□□ 2.34
PPFIA3-209ENST00000602783 TIMELESSQ9UNS1 1208 aa29.66■■■□□ 2.34
PPFIA3-209ENST00000602783 HOXC9P31274 260 aa29.64■■■□□ 2.34
PPFIA3-209ENST00000602783 STK32BQ9NY57 414 aa29.63■■■□□ 2.33
PPFIA3-209ENST00000602783 KAT6BQ8WYB5 2073 aa29.63■■■□□ 2.33
PPFIA3-209ENST00000602783 FYB1O15117 783 aa29.62■■■□□ 2.33
PPFIA3-209ENST00000602783 PDGFDQ9GZP0 370 aaPredicted RBP29.62■■■□□ 2.33
PPFIA3-209ENST00000602783 GGNBP2Q9H3C7 697 aa29.62■■■□□ 2.33
PPFIA3-209ENST00000602783 MYOM1P52179 1685 aa29.61■■■□□ 2.33
PPFIA3-209ENST00000602783 DDX54Q8TDD1 881 aaKnown RBP29.61■■■□□ 2.33
PPFIA3-209ENST00000602783 CDCA8Q53HL2 280 aa29.6■■■□□ 2.33
PPFIA3-209ENST00000602783 NHSQ6T4R5 1651 aa29.6■■■□□ 2.33
PPFIA3-209ENST00000602783 SLC15A2Q16348 729 aa29.59■■■□□ 2.33
PPFIA3-209ENST00000602783 RRS1Q15050 365 aaKnown RBP29.58■■■□□ 2.33
PPFIA3-209ENST00000602783 ZBTB7AO95365 584 aa29.57■■■□□ 2.32
PPFIA3-209ENST00000602783 KIF20BQ96Q89 1820 aa29.56■■■□□ 2.32
PPFIA3-209ENST00000602783 FAM208AQ9UK61 1670 aaKnown RBP29.54■■■□□ 2.32
PPFIA3-209ENST00000602783 CASZ1Q86V15 1759 aa29.54■■■□□ 2.32
PPFIA3-209ENST00000602783 ATF5Q9Y2D1 282 aaPredicted RBP29.53■■■□□ 2.32
PPFIA3-209ENST00000602783 CCER1Q8TC90 406 aaPredicted RBP29.52■■■□□ 2.32
PPFIA3-209ENST00000602783 RTL1A6NKG5 1358 aa29.52■■■□□ 2.32
PPFIA3-209ENST00000602783 ZCRB1Q8TBF4 217 aaKnown RBP29.51■■■□□ 2.31
PPFIA3-209ENST00000602783 BTAF1O14981 1849 aa29.5■■■□□ 2.31
PPFIA3-209ENST00000602783 NBPF6Q5VWK0 638 aa29.5■■■□□ 2.31
PPFIA3-209ENST00000602783 NBPF4Q96M43 638 aa29.5■■■□□ 2.31
PPFIA3-209ENST00000602783 RGPD2P0DJD1 1756 aa29.49■■■□□ 2.31
PPFIA3-209ENST00000602783 SYTL4Q96C24 671 aaPredicted RBP29.48■■■□□ 2.31
PPFIA3-209ENST00000602783 CARD14Q9BXL6 1004 aa29.48■■■□□ 2.31
PPFIA3-209ENST00000602783 LRRC4BQ9NT99 713 aa29.48■■■□□ 2.31
PPFIA3-209ENST00000602783 PTGER2P43116 358 aa29.47■■■□□ 2.31
PPFIA3-209ENST00000602783 USHBP1Q8N6Y0 703 aa29.47■■■□□ 2.31
PPFIA3-209ENST00000602783 PRIM1P49642 420 aaKnown RBP29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms