RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 OVOS2A0A0J9YW53 1432 aa25.37■■□□□ 1.65
SHKBP1-227ENST00000602011 OVOS2Q6IE36 1432 aa25.37■■□□□ 1.65
SHKBP1-227ENST00000602011 PIK3C2AO00443 1686 aa25.36■■□□□ 1.65
SHKBP1-227ENST00000602011 SBNO2Q9Y2G9 1366 aa25.36■■□□□ 1.65
SHKBP1-227ENST00000602011 PLSCR1O15162 318 aa25.36■■□□□ 1.65
SHKBP1-227ENST00000602011 ANO8Q9HCE9 1232 aaPredicted RBP25.36■■□□□ 1.65
SHKBP1-227ENST00000602011 PPP1R1BQ9UD71 204 aaPredicted RBP25.36■■□□□ 1.65
SHKBP1-227ENST00000602011 SOX12O15370 315 aa25.35■■□□□ 1.65
SHKBP1-227ENST00000602011 SPON1Q9HCB6 807 aa25.35■■□□□ 1.65
SHKBP1-227ENST00000602011 COL18A1P39060 1754 aa25.35■■□□□ 1.65
SHKBP1-227ENST00000602011 SBF2Q86WG5 1849 aa25.35■■□□□ 1.65
SHKBP1-227ENST00000602011 TRPM1Q7Z4N2 1603 aa25.34■■□□□ 1.65
SHKBP1-227ENST00000602011 KCNQ2O43526 872 aa25.34■■□□□ 1.65
SHKBP1-227ENST00000602011 CARD10Q9BWT7 1032 aa25.34■■□□□ 1.65
SHKBP1-227ENST00000602011 CPSF1Q10570 1443 aaKnown RBP25.34■■□□□ 1.65
SHKBP1-227ENST00000602011 YY1P25490 414 aa25.33■■□□□ 1.65
SHKBP1-227ENST00000602011 PDGFDQ9GZP0 370 aaPredicted RBP25.33■■□□□ 1.65
SHKBP1-227ENST00000602011 KTN1Q86UP2 1357 aaKnown RBP25.32■■□□□ 1.64
SHKBP1-227ENST00000602011 SLC24A1O60721 1099 aa25.32■■□□□ 1.64
SHKBP1-227ENST00000602011 MARCH10Q8NA82 808 aaPredicted RBP25.32■■□□□ 1.64
SHKBP1-227ENST00000602011 PUS7Q96PZ0 661 aaKnown RBP25.32■■□□□ 1.64
SHKBP1-227ENST00000602011 BCL11BQ9C0K0 894 aaPredicted RBP25.32■■□□□ 1.64
SHKBP1-227ENST00000602011 BCL9O00512 1426 aa25.3■■□□□ 1.64
SHKBP1-227ENST00000602011 CSB-PGBD3P0DP91 1061 aa25.3■■□□□ 1.64
SHKBP1-227ENST00000602011 CARD11Q9BXL7 1154 aa25.3■■□□□ 1.64
SHKBP1-227ENST00000602011 RGPD5Q99666 1765 aa25.29■■□□□ 1.64
SHKBP1-227ENST00000602011 WNK3Q9BYP7 1800 aa25.29■■□□□ 1.64
SHKBP1-227ENST00000602011 PROM2Q8N271 834 aa25.29■■□□□ 1.64
SHKBP1-227ENST00000602011 EXOC5O00471 708 aa25.28■■□□□ 1.64
SHKBP1-227ENST00000602011 USP31Q70CQ4 1352 aa25.28■■□□□ 1.64
SHKBP1-227ENST00000602011 HDGFL2Q7Z4V5 671 aaPredicted RBP25.27■■□□□ 1.64
SHKBP1-227ENST00000602011 CCDC7Q96M83 1385 aa25.27■■□□□ 1.64
SHKBP1-227ENST00000602011 RGPD3A6NKT7 1758 aaPredicted RBP25.26■■□□□ 1.63
SHKBP1-227ENST00000602011 RGPD4Q7Z3J3 1758 aa25.26■■□□□ 1.63
SHKBP1-227ENST00000602011 CASZ1Q86V15 1759 aa25.25■■□□□ 1.63
SHKBP1-227ENST00000602011 ZBTB7AO95365 584 aa25.24■■□□□ 1.63
SHKBP1-227ENST00000602011 TERF2IPQ9NYB0 399 aa25.24■■□□□ 1.63
SHKBP1-227ENST00000602011 ABCC6O95255 1503 aa25.23■■□□□ 1.63
SHKBP1-227ENST00000602011 NINLQ9Y2I6 1382 aa25.23■■□□□ 1.63
SHKBP1-227ENST00000602011 AKAP12Q02952 1782 aa25.23■■□□□ 1.63
SHKBP1-227ENST00000602011 TMC1Q8TDI8 760 aa25.22■■□□□ 1.63
SHKBP1-227ENST00000602011 TONSLQ96HA7 1378 aa25.2■■□□□ 1.63
SHKBP1-227ENST00000602011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.2■■□□□ 1.62
SHKBP1-227ENST00000602011 ATF5Q9Y2D1 282 aaPredicted RBP25.2■■□□□ 1.62
SHKBP1-227ENST00000602011 NFAT5O94916 1531 aa25.2■■□□□ 1.62
SHKBP1-227ENST00000602011 TXNRD1Q16881 649 aa25.19■■□□□ 1.62
SHKBP1-227ENST00000602011 MYOM1P52179 1685 aa25.17■■□□□ 1.62
SHKBP1-227ENST00000602011 DCAF8L1A6NGE4 600 aa25.17■■□□□ 1.62
SHKBP1-227ENST00000602011 SLC12A5Q9H2X9 1139 aa25.17■■□□□ 1.62
SHKBP1-227ENST00000602011 PTGER2P43116 358 aa25.16■■□□□ 1.62
SHKBP1-227ENST00000602011 ERBB3P21860 1342 aa25.15■■□□□ 1.62
SHKBP1-227ENST00000602011 EDC4Q6P2E9 1401 aaKnown RBP25.15■■□□□ 1.62
SHKBP1-227ENST00000602011 ACSBG1Q96GR2 724 aa25.15■■□□□ 1.62
SHKBP1-227ENST00000602011 NME9Q86XW9 330 aa25.14■■□□□ 1.62
SHKBP1-227ENST00000602011 NLRP2Q9NX02 1062 aa25.14■■□□□ 1.62
SHKBP1-227ENST00000602011 STK32BQ9NY57 414 aa25.14■■□□□ 1.62
SHKBP1-227ENST00000602011 IL2RBP14784 551 aa25.13■■□□□ 1.61
SHKBP1-227ENST00000602011 TNS2Q63HR2 1409 aa25.12■■□□□ 1.61
SHKBP1-227ENST00000602011 SLC15A2Q16348 729 aa25.12■■□□□ 1.61
SHKBP1-227ENST00000602011 CD163L1Q9NR16 1453 aa25.11■■□□□ 1.61
SHKBP1-227ENST00000602011 MON2Q7Z3U7 1717 aa25.1■■□□□ 1.61
SHKBP1-227ENST00000602011 ANKRD24Q8TF21 1146 aa25.1■■□□□ 1.61
SHKBP1-227ENST00000602011 IP6K1Q92551 441 aa25.09■■□□□ 1.61
SHKBP1-227ENST00000602011 FHDC1Q9C0D6 1143 aaPredicted RBP25.08■■□□□ 1.61
SHKBP1-227ENST00000602011 NHSQ6T4R5 1651 aa25.07■■□□□ 1.6
SHKBP1-227ENST00000602011 USP54Q70EL1 1684 aa25.06■■□□□ 1.6
SHKBP1-227ENST00000602011 A0A1W2PP64 1363 aa25.05■■□□□ 1.6
SHKBP1-227ENST00000602011 ST20-MTHFSA0A0A6YYL1 179 aa25.05■■□□□ 1.6
SHKBP1-227ENST00000602011 COG3Q96JB2 828 aa25.05■■□□□ 1.6
SHKBP1-227ENST00000602011 TESK2Q96S53 571 aa25.05■■□□□ 1.6
SHKBP1-227ENST00000602011 SYT17Q9BSW7 474 aa25.04■■□□□ 1.6
SHKBP1-227ENST00000602011 LTN1O94822 1766 aa25.03■■□□□ 1.6
SHKBP1-227ENST00000602011 UTRNP46939 3433 aa25.03■■□□□ 1.6
SHKBP1-227ENST00000602011 SGIP1Q9BQI5 828 aa25.03■■□□□ 1.6
SHKBP1-227ENST00000602011 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
SHKBP1-227ENST00000602011 ZNF827Q17R98 1081 aa25.02■■□□□ 1.6
SHKBP1-227ENST00000602011 KAT6BQ8WYB5 2073 aa25.01■■□□□ 1.59
SHKBP1-227ENST00000602011 BTAF1O14981 1849 aa25.01■■□□□ 1.59
SHKBP1-227ENST00000602011 PAPPAQ13219 1627 aa25.01■■□□□ 1.59
SHKBP1-227ENST00000602011 CDCA8Q53HL2 280 aa24.99■■□□□ 1.59
SHKBP1-227ENST00000602011 ZNF784Q8NCA9 323 aaPredicted RBP24.99■■□□□ 1.59
SHKBP1-227ENST00000602011 LRRC4BQ9NT99 713 aa24.99■■□□□ 1.59
SHKBP1-227ENST00000602011 TMF1P82094 1093 aa24.98■■□□□ 1.59
SHKBP1-227ENST00000602011 AMPHP49418 695 aa24.97■■□□□ 1.59
SHKBP1-227ENST00000602011 LTV1Q96GA3 475 aaPredicted RBP24.97■■□□□ 1.59
SHKBP1-227ENST00000602011 ARXQ96QS3 562 aa24.96■■□□□ 1.59
SHKBP1-227ENST00000602011 ANKRD36BQ8N2N9 1353 aa24.95■■□□□ 1.59
SHKBP1-227ENST00000602011 SLC27A3Q5K4L6 730 aa24.95■■□□□ 1.58
SHKBP1-227ENST00000602011 HMGB2P26583 209 aaKnown RBP24.94■■□□□ 1.58
SHKBP1-227ENST00000602011 HOXC9P31274 260 aa24.94■■□□□ 1.58
SHKBP1-227ENST00000602011 KCNQ4P56696 695 aa24.94■■□□□ 1.58
SHKBP1-227ENST00000602011 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
SHKBP1-227ENST00000602011 DDX54Q8TDD1 881 aaKnown RBP24.94■■□□□ 1.58
SHKBP1-227ENST00000602011 MAP3K19Q56UN5 1328 aa24.93■■□□□ 1.58
SHKBP1-227ENST00000602011 CGNL1Q0VF96 1302 aa24.92■■□□□ 1.58
SHKBP1-227ENST00000602011 FBLN1P23142 703 aa24.92■■□□□ 1.58
SHKBP1-227ENST00000602011 SLC16A10Q8TF71 515 aa24.91■■□□□ 1.58
SHKBP1-227ENST00000602011 TIMELESSQ9UNS1 1208 aa24.91■■□□□ 1.58
SHKBP1-227ENST00000602011 KLHL34Q8N239 644 aa24.9■■□□□ 1.58
SHKBP1-227ENST00000602011 ZCRB1Q8TBF4 217 aaKnown RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms