RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 MAP10Q9P2G4 905 aa12.68□□□□□ -0.38
LINC00343-209ENST00000601607 ST8SIA5O15466 376 aa12.67□□□□□ -0.38
LINC00343-209ENST00000601607 F12P00748 615 aaPredicted RBP12.67□□□□□ -0.38
LINC00343-209ENST00000601607 ADGRL1O94910 1474 aa12.66□□□□□ -0.38
LINC00343-209ENST00000601607 HECW2Q9P2P5 1572 aa12.65□□□□□ -0.38
LINC00343-209ENST00000601607 FHAD1B1AJZ9 1412 aa12.65□□□□□ -0.38
LINC00343-209ENST00000601607 LRRN4Q8WUT4 740 aa12.65□□□□□ -0.38
LINC00343-209ENST00000601607 TTC24A2A3L6 582 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-209ENST00000601607 POTECB2RU33 542 aa12.64□□□□□ -0.39
LINC00343-209ENST00000601607 WNT7AO00755 349 aa12.64□□□□□ -0.39
LINC00343-209ENST00000601607 AXIN1O15169 862 aa12.63□□□□□ -0.39
LINC00343-209ENST00000601607 SMCPP49901 116 aaPredicted RBP12.62□□□□□ -0.39
LINC00343-209ENST00000601607 SKOR1P84550 965 aa12.62□□□□□ -0.39
LINC00343-209ENST00000601607 LINC01559Q495D7 138 aa12.62□□□□□ -0.39
LINC00343-209ENST00000601607 TMEM259Q4ZIN3 620 aa12.62□□□□□ -0.39
LINC00343-209ENST00000601607 BAP1Q92560 729 aa12.62□□□□□ -0.39
LINC00343-209ENST00000601607 USP17L8P0C7I0 530 aa12.61□□□□□ -0.39
LINC00343-209ENST00000601607 WNT7BP56706 349 aa12.61□□□□□ -0.39
LINC00343-209ENST00000601607 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
LINC00343-209ENST00000601607 FBXO41Q8TF61 875 aa12.6□□□□□ -0.39
LINC00343-209ENST00000601607 ADCY10Q96PN6 1610 aa12.59□□□□□ -0.39
LINC00343-209ENST00000601607 SH3BP2P78314 561 aa12.58□□□□□ -0.4
LINC00343-209ENST00000601607 WRNQ14191 1432 aaPredicted RBP eCLIP12.58□□□□□ -0.4
LINC00343-209ENST00000601607 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
LINC00343-209ENST00000601607 ZNF511Q8NB15 262 aa12.57□□□□□ -0.4
LINC00343-209ENST00000601607 NR6A1Q15406 480 aa12.56□□□□□ -0.4
LINC00343-209ENST00000601607 MRGPRX2Q96LB1 330 aa12.56□□□□□ -0.4
LINC00343-209ENST00000601607 HMX1Q9NP08 348 aaPredicted RBP12.56□□□□□ -0.4
LINC00343-209ENST00000601607 TSPOAP1O95153 1857 aa12.56□□□□□ -0.4
LINC00343-209ENST00000601607 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
LINC00343-209ENST00000601607 EHBP1Q8NDI1 1231 aa12.54□□□□□ -0.4
LINC00343-209ENST00000601607 EPS8L1Q8TE68 723 aa12.53□□□□□ -0.4
LINC00343-209ENST00000601607 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
LINC00343-209ENST00000601607 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-209ENST00000601607 SMPD1P17405 629 aa12.52□□□□□ -0.41
LINC00343-209ENST00000601607 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
LINC00343-209ENST00000601607 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
LINC00343-209ENST00000601607 COL17A1Q9UMD9 1497 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-209ENST00000601607 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.41
LINC00343-209ENST00000601607 NBPF14Q5TI25 921 aa12.51□□□□□ -0.41
LINC00343-209ENST00000601607 BANK1Q8NDB2 785 aa12.51□□□□□ -0.41
LINC00343-209ENST00000601607 FOXJ1Q92949 421 aa12.51□□□□□ -0.41
LINC00343-209ENST00000601607 GMPR2Q9P2T1 348 aaKnown RBP12.51□□□□□ -0.41
LINC00343-209ENST00000601607 AGERQ15109 404 aa12.5□□□□□ -0.41
LINC00343-209ENST00000601607 TMEM132AQ24JP5 1023 aa12.5□□□□□ -0.41
LINC00343-209ENST00000601607 FKBPLQ9UIM3 349 aa12.49□□□□□ -0.41
LINC00343-209ENST00000601607 BPHLQ86WA6 291 aaPredicted RBP12.47□□□□□ -0.41
LINC00343-209ENST00000601607 TRIM34Q9BYJ4 488 aa12.47□□□□□ -0.41
LINC00343-209ENST00000601607 SNRKQ9NRH2 765 aa12.47□□□□□ -0.41
LINC00343-209ENST00000601607 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.41
LINC00343-209ENST00000601607 J3QL48 77 aa12.46□□□□□ -0.41
LINC00343-209ENST00000601607 VARSP26640 1264 aaKnown RBP12.46□□□□□ -0.41
LINC00343-209ENST00000601607 GPKOWQ92917 476 aaPredicted RBP eCLIP12.46□□□□□ -0.41
LINC00343-209ENST00000601607 SENP2Q9HC62 589 aa12.46□□□□□ -0.41
LINC00343-209ENST00000601607 ASXL2Q76L83 1435 aa12.45□□□□□ -0.42
LINC00343-209ENST00000601607 SIAH2O43255 324 aa12.45□□□□□ -0.42
LINC00343-209ENST00000601607 C4orf48Q5BLP8 95 aa12.45□□□□□ -0.42
LINC00343-209ENST00000601607 MTMR14Q8NCE2 650 aa12.45□□□□□ -0.42
LINC00343-209ENST00000601607 PNMA1Q8ND90 353 aa12.45□□□□□ -0.42
LINC00343-209ENST00000601607 ATP13A2Q9NQ11 1180 aa12.45□□□□□ -0.42
LINC00343-209ENST00000601607 LMTK3Q96Q04 1460 aa12.45□□□□□ -0.42
LINC00343-209ENST00000601607 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
LINC00343-209ENST00000601607 LCE2AQ5TA79 106 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-209ENST00000601607 SH3BP5LQ7L8J4 393 aa12.44□□□□□ -0.42
LINC00343-209ENST00000601607 GJD4Q96KN9 370 aaPredicted RBP12.44□□□□□ -0.42
LINC00343-209ENST00000601607 PTPRGP23470 1445 aa12.44□□□□□ -0.42
LINC00343-209ENST00000601607 ZC3H4Q9UPT8 1303 aaKnown RBP12.43□□□□□ -0.42
LINC00343-209ENST00000601607 PLB1Q6P1J6 1458 aa12.43□□□□□ -0.42
LINC00343-209ENST00000601607 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
LINC00343-209ENST00000601607 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
LINC00343-209ENST00000601607 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
LINC00343-209ENST00000601607 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
LINC00343-209ENST00000601607 TLL2Q9Y6L7 1015 aa12.43□□□□□ -0.42
LINC00343-209ENST00000601607 GLI2P10070 1586 aa12.43□□□□□ -0.42
LINC00343-209ENST00000601607 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
LINC00343-209ENST00000601607 SH3RF1Q7Z6J0 888 aa12.42□□□□□ -0.42
LINC00343-209ENST00000601607 CARD14Q9BXL6 1004 aa12.42□□□□□ -0.42
LINC00343-209ENST00000601607 WFS1O76024 890 aa12.41□□□□□ -0.42
LINC00343-209ENST00000601607 KIFC2Q96AC6 838 aa12.41□□□□□ -0.42
LINC00343-209ENST00000601607 KIAA0586Q9BVV6 1533 aa12.41□□□□□ -0.42
LINC00343-209ENST00000601607 TOP2BQ02880 1626 aa12.4□□□□□ -0.42
LINC00343-209ENST00000601607 HPS1Q92902 700 aa12.4□□□□□ -0.42
LINC00343-209ENST00000601607 TRIM47Q96LD4 638 aa12.4□□□□□ -0.42
LINC00343-209ENST00000601607 ARHGAP9Q9BRR9 750 aa12.4□□□□□ -0.42
LINC00343-209ENST00000601607 APBB1O00213 710 aa12.39□□□□□ -0.43
LINC00343-209ENST00000601607 SOCS7O14512 581 aa12.39□□□□□ -0.43
LINC00343-209ENST00000601607 PTK2Q05397 1052 aa12.38□□□□□ -0.43
LINC00343-209ENST00000601607 ARID5BQ14865 1188 aa12.38□□□□□ -0.43
LINC00343-209ENST00000601607 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
LINC00343-209ENST00000601607 C1QTNF2Q9BXJ5 285 aa12.37□□□□□ -0.43
LINC00343-209ENST00000601607 WASF2Q9Y6W5 498 aa12.37□□□□□ -0.43
LINC00343-209ENST00000601607 EPRSP07814 1512 aaKnown RBP12.37□□□□□ -0.43
LINC00343-209ENST00000601607 TEX14Q8IWB6 1497 aa12.36□□□□□ -0.43
LINC00343-209ENST00000601607 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
LINC00343-209ENST00000601607 GPSM3Q9Y4H4 160 aa12.36□□□□□ -0.43
LINC00343-209ENST00000601607 NDUFB9Q9Y6M9 179 aa12.36□□□□□ -0.43
LINC00343-209ENST00000601607 TNIKQ9UKE5 1360 aa12.35□□□□□ -0.43
LINC00343-209ENST00000601607 ERFEQ4G0M1 354 aa12.35□□□□□ -0.43
LINC00343-209ENST00000601607 MPNDQ8N594 471 aa12.35□□□□□ -0.43
LINC00343-209ENST00000601607 OCSTAMPQ9BR26 566 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms