RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 USP35Q9P2H5 1018 aa17.69■□□□□ 0.42
USE1-209ENST00000601592 SPATA31A5Q5VU36 1347 aa17.69■□□□□ 0.42
USE1-209ENST00000601592 SPATA31A7Q8IWB4 1347 aa17.69■□□□□ 0.42
USE1-209ENST00000601592 CARD14Q9BXL6 1004 aa17.68■□□□□ 0.42
USE1-209ENST00000601592 ANKRD26Q9UPS8 1709 aa17.67■□□□□ 0.42
USE1-209ENST00000601592 FYB1O15117 783 aa17.67■□□□□ 0.42
USE1-209ENST00000601592 LARP1Q6PKG0 1096 aaKnown RBP17.67■□□□□ 0.42
USE1-209ENST00000601592 KIF7Q2M1P5 1343 aa17.67■□□□□ 0.42
USE1-209ENST00000601592 SEPT12Q8IYM1 358 aa17.66■□□□□ 0.42
USE1-209ENST00000601592 ABCC6O95255 1503 aa17.66■□□□□ 0.42
USE1-209ENST00000601592 CSB-PGBD3P0DP91 1061 aa17.65■□□□□ 0.42
USE1-209ENST00000601592 PANK3Q9H999 370 aa17.65■□□□□ 0.42
USE1-209ENST00000601592 AXIN2Q9Y2T1 843 aa17.65■□□□□ 0.42
USE1-209ENST00000601592 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
USE1-209ENST00000601592 WNK3Q9BYP7 1800 aa17.64■□□□□ 0.41
USE1-209ENST00000601592 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
USE1-209ENST00000601592 CGNL1Q0VF96 1302 aa17.64■□□□□ 0.41
USE1-209ENST00000601592 THSD7AQ9UPZ6 1657 aa17.64■□□□□ 0.41
USE1-209ENST00000601592 CRB1P82279 1406 aa17.64■□□□□ 0.41
USE1-209ENST00000601592 FBLN1P23142 703 aa17.62■□□□□ 0.41
USE1-209ENST00000601592 MAP2P11137 1827 aaKnown RBP17.62■□□□□ 0.41
USE1-209ENST00000601592 AMPHP49418 695 aa17.61■□□□□ 0.41
USE1-209ENST00000601592 TCP11L2Q8N4U5 519 aa17.61■□□□□ 0.41
USE1-209ENST00000601592 WDR17Q8IZU2 1322 aa17.61■□□□□ 0.41
USE1-209ENST00000601592 CCDC7Q96M83 1385 aa17.61■□□□□ 0.41
USE1-209ENST00000601592 RRS1Q15050 365 aaKnown RBP17.6■□□□□ 0.41
USE1-209ENST00000601592 MAP3K19Q56UN5 1328 aa17.6■□□□□ 0.41
USE1-209ENST00000601592 FAM208AQ9UK61 1670 aaKnown RBP17.6■□□□□ 0.41
USE1-209ENST00000601592 RGPD2P0DJD1 1756 aa17.59■□□□□ 0.41
USE1-209ENST00000601592 ONECUT3O60422 494 aaPredicted RBP17.59■□□□□ 0.41
USE1-209ENST00000601592 LTV1Q96GA3 475 aaPredicted RBP17.59■□□□□ 0.41
USE1-209ENST00000601592 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.41
USE1-209ENST00000601592 BLMP54132 1417 aaPredicted RBP17.58■□□□□ 0.41
USE1-209ENST00000601592 WASHC2AQ641Q2 1341 aa17.58■□□□□ 0.4
USE1-209ENST00000601592 KRT27Q7Z3Y8 459 aa17.58■□□□□ 0.4
USE1-209ENST00000601592 PEAK1Q9H792 1746 aa17.58■□□□□ 0.4
USE1-209ENST00000601592 ERBB3P21860 1342 aa17.57■□□□□ 0.4
USE1-209ENST00000601592 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
USE1-209ENST00000601592 ANKRD24Q8TF21 1146 aa17.57■□□□□ 0.4
USE1-209ENST00000601592 IP6K1Q92551 441 aa17.57■□□□□ 0.4
USE1-209ENST00000601592 UPF1Q92900 1129 aaKnown RBP eCLIP17.57■□□□□ 0.4
USE1-209ENST00000601592 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
USE1-209ENST00000601592 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
USE1-209ENST00000601592 HOXC9P31274 260 aa17.56■□□□□ 0.4
USE1-209ENST00000601592 TNNT2P45379 298 aaPredicted RBP17.56■□□□□ 0.4
USE1-209ENST00000601592 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
USE1-209ENST00000601592 RTL1A6NKG5 1358 aa17.55■□□□□ 0.4
USE1-209ENST00000601592 LRRC37A3O60309 1634 aa17.55■□□□□ 0.4
USE1-209ENST00000601592 EP400Q96L91 3159 aa17.54■□□□□ 0.4
USE1-209ENST00000601592 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
USE1-209ENST00000601592 CARD10Q9BWT7 1032 aa17.54■□□□□ 0.4
USE1-209ENST00000601592 NSD2O96028 1365 aa17.53■□□□□ 0.4
USE1-209ENST00000601592 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
USE1-209ENST00000601592 FAM182BQ5T319 152 aa17.53■□□□□ 0.4
USE1-209ENST00000601592 FLT4P35916 1363 aa17.53■□□□□ 0.4
USE1-209ENST00000601592 EMILIN1Q9Y6C2 1016 aa17.52■□□□□ 0.4
USE1-209ENST00000601592 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.4
USE1-209ENST00000601592 CNGB1Q14028 1251 aaPredicted RBP17.51■□□□□ 0.39
USE1-209ENST00000601592 MORC1Q86VD1 984 aa17.51■□□□□ 0.39
USE1-209ENST00000601592 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
USE1-209ENST00000601592 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
USE1-209ENST00000601592 DDB1Q16531 1140 aa17.49■□□□□ 0.39
USE1-209ENST00000601592 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
USE1-209ENST00000601592 HSP90AB2PQ58FF8 381 aa17.48■□□□□ 0.39
USE1-209ENST00000601592 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
USE1-209ENST00000601592 CDCA7Q9BWT1 371 aaPredicted RBP17.48■□□□□ 0.39
USE1-209ENST00000601592 INSRP06213 1382 aa17.48■□□□□ 0.39
USE1-209ENST00000601592 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
USE1-209ENST00000601592 SF3B2Q13435 895 aaKnown RBP17.47■□□□□ 0.39
USE1-209ENST00000601592 AMER1Q5JTC6 1135 aaPredicted RBP17.47■□□□□ 0.39
USE1-209ENST00000601592 KAT6BQ8WYB5 2073 aa17.47■□□□□ 0.39
USE1-209ENST00000601592 IL2RBP14784 551 aa17.46■□□□□ 0.39
USE1-209ENST00000601592 POLKQ9UBT6 870 aa17.46■□□□□ 0.39
USE1-209ENST00000601592 TNS1Q9HBL0 1735 aaKnown RBP17.46■□□□□ 0.39
USE1-209ENST00000601592 SBF2Q86WG5 1849 aa17.45■□□□□ 0.38
USE1-209ENST00000601592 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
USE1-209ENST00000601592 USHBP1Q8N6Y0 703 aa17.45■□□□□ 0.38
USE1-209ENST00000601592 TNS2Q63HR2 1409 aa17.45■□□□□ 0.38
USE1-209ENST00000601592 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
USE1-209ENST00000601592 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
USE1-209ENST00000601592 OVOS2A0A0G2JMS6 1433 aa17.44■□□□□ 0.38
USE1-209ENST00000601592 EXOC5O00471 708 aa17.43■□□□□ 0.38
USE1-209ENST00000601592 NBPF6Q5VWK0 638 aa17.43■□□□□ 0.38
USE1-209ENST00000601592 NBPF4Q96M43 638 aa17.43■□□□□ 0.38
USE1-209ENST00000601592 TRIM37O94972 964 aa17.41■□□□□ 0.38
USE1-209ENST00000601592 MEGF6O75095 1541 aa17.41■□□□□ 0.38
USE1-209ENST00000601592 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
USE1-209ENST00000601592 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
USE1-209ENST00000601592 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
USE1-209ENST00000601592 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
USE1-209ENST00000601592 NPC1L1Q9UHC9 1359 aa17.39■□□□□ 0.37
USE1-209ENST00000601592 BAG6P46379 1132 aa17.38■□□□□ 0.37
USE1-209ENST00000601592 EIF4A2Q14240 407 aaKnown RBP17.38■□□□□ 0.37
USE1-209ENST00000601592 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
USE1-209ENST00000601592 TATP17735 454 aaPredicted RBP17.36■□□□□ 0.37
USE1-209ENST00000601592 MTHFSP49914 203 aa17.35■□□□□ 0.37
USE1-209ENST00000601592 EYA1Q99502 592 aa17.35■□□□□ 0.37
USE1-209ENST00000601592 NHSQ6T4R5 1651 aa17.35■□□□□ 0.37
USE1-209ENST00000601592 DOT1LQ8TEK3 1739 aa17.35■□□□□ 0.37
USE1-209ENST00000601592 APBA3O96018 575 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms