RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 ARHGEF25Q86VW2 580 aa29.94■■■□□ 2.38
IRF3-228ENST00000601291 CCDC146Q8IYE0 955 aa29.94■■■□□ 2.38
IRF3-228ENST00000601291 PNNQ9H307 717 aaKnown RBP29.94■■■□□ 2.38
IRF3-228ENST00000601291 ZBTB7CA1YPR0 619 aa29.93■■■□□ 2.38
IRF3-228ENST00000601291 IP6K1Q92551 441 aa29.93■■■□□ 2.38
IRF3-228ENST00000601291 RUNDC1Q96C34 613 aa29.92■■■□□ 2.38
IRF3-228ENST00000601291 PHLPP1O60346 1717 aa29.92■■■□□ 2.38
IRF3-228ENST00000601291 CABLES1Q8TDN4 633 aa29.91■■■□□ 2.38
IRF3-228ENST00000601291 FCHSD2O94868 740 aa29.89■■■□□ 2.38
IRF3-228ENST00000601291 HAP1P54257 671 aaPredicted RBP29.89■■■□□ 2.38
IRF3-228ENST00000601291 ZC3H6P61129 1189 aaKnown RBP29.88■■■□□ 2.37
IRF3-228ENST00000601291 COL16A1Q07092 1604 aaPredicted RBP29.87■■■□□ 2.37
IRF3-228ENST00000601291 ABCA3Q99758 1704 aa29.87■■■□□ 2.37
IRF3-228ENST00000601291 CPDO75976 1380 aa29.87■■■□□ 2.37
IRF3-228ENST00000601291 ABCC6O95255 1503 aa29.87■■■□□ 2.37
IRF3-228ENST00000601291 RGPD1P0DJD0 1748 aa29.86■■■□□ 2.37
IRF3-228ENST00000601291 MAPK8IP3Q9UPT6 1336 aa29.85■■■□□ 2.37
IRF3-228ENST00000601291 SENP3-EIF4A1A0A087X0R7 540 aa29.85■■■□□ 2.37
IRF3-228ENST00000601291 NGEFQ8N5V2 710 aa29.85■■■□□ 2.37
IRF3-228ENST00000601291 APAF1O14727 1248 aa29.84■■■□□ 2.37
IRF3-228ENST00000601291 NEFMP07197 916 aa29.84■■■□□ 2.37
IRF3-228ENST00000601291 RSPH6AQ9H0K4 717 aa29.84■■■□□ 2.37
IRF3-228ENST00000601291 COL22A1Q8NFW1 1626 aaPredicted RBP29.83■■■□□ 2.37
IRF3-228ENST00000601291 HMOX1P09601 288 aa29.83■■■□□ 2.37
IRF3-228ENST00000601291 PLEKHF1Q96S99 279 aa29.82■■■□□ 2.36
IRF3-228ENST00000601291 KIAA0232Q92628 1395 aa29.82■■■□□ 2.36
IRF3-228ENST00000601291 LTV1Q96GA3 475 aaPredicted RBP29.81■■■□□ 2.36
IRF3-228ENST00000601291 SALL2Q9Y467 1007 aaPredicted RBP29.81■■■□□ 2.36
IRF3-228ENST00000601291 PRKAR2BP31323 418 aa29.81■■■□□ 2.36
IRF3-228ENST00000601291 IGSF1Q8N6C5 1336 aa29.8■■■□□ 2.36
IRF3-228ENST00000601291 TCP11L2Q8N4U5 519 aa29.8■■■□□ 2.36
IRF3-228ENST00000601291 SULT6B1Q6IMI4 303 aa29.79■■■□□ 2.36
IRF3-228ENST00000601291 EYA1Q99502 592 aa29.78■■■□□ 2.36
IRF3-228ENST00000601291 PRDM11Q9NQV5 511 aa29.77■■■□□ 2.36
IRF3-228ENST00000601291 COL18A1P39060 1754 aa29.76■■■□□ 2.35
IRF3-228ENST00000601291 ANKRD24Q8TF21 1146 aa29.76■■■□□ 2.35
IRF3-228ENST00000601291 NCBP3Q53F19 620 aaKnown RBP29.75■■■□□ 2.35
IRF3-228ENST00000601291 AXIN2Q9Y2T1 843 aa29.75■■■□□ 2.35
IRF3-228ENST00000601291 KDRP35968 1356 aa29.75■■■□□ 2.35
IRF3-228ENST00000601291 AEBP1Q8IUX7 1158 aa29.74■■■□□ 2.35
IRF3-228ENST00000601291 CHRNA2Q15822 529 aa29.73■■■□□ 2.35
IRF3-228ENST00000601291 ERBB3P21860 1342 aa29.73■■■□□ 2.35
IRF3-228ENST00000601291 PDE3BQ13370 1112 aa29.73■■■□□ 2.35
IRF3-228ENST00000601291 RRP7AQ9Y3A4 280 aaKnown RBP29.71■■■□□ 2.35
IRF3-228ENST00000601291 RGPD5Q99666 1765 aa29.7■■■□□ 2.35
IRF3-228ENST00000601291 NEUROD2Q15784 382 aa29.7■■■□□ 2.35
IRF3-228ENST00000601291 TMPOP42166 694 aaKnown RBP29.69■■■□□ 2.34
IRF3-228ENST00000601291 LMO7Q8WWI1 1683 aa29.69■■■□□ 2.34
IRF3-228ENST00000601291 CCDC27Q2M243 656 aa29.69■■■□□ 2.34
IRF3-228ENST00000601291 FAM208AQ9UK61 1670 aaKnown RBP29.68■■■□□ 2.34
IRF3-228ENST00000601291 ZNF521Q96K83 1311 aa29.68■■■□□ 2.34
IRF3-228ENST00000601291 NBPF6Q5VWK0 638 aa29.68■■■□□ 2.34
IRF3-228ENST00000601291 NBPF4Q96M43 638 aa29.68■■■□□ 2.34
IRF3-228ENST00000601291 CAMTA1Q9Y6Y1 1673 aa29.67■■■□□ 2.34
IRF3-228ENST00000601291 PHACTR3Q96KR7 559 aa29.67■■■□□ 2.34
IRF3-228ENST00000601291 NFE2L2Q16236 605 aa29.66■■■□□ 2.34
IRF3-228ENST00000601291 CSB-PGBD3P0DP91 1061 aa29.65■■■□□ 2.34
IRF3-228ENST00000601291 JCADQ9P266 1359 aa29.65■■■□□ 2.34
IRF3-228ENST00000601291 NCAPD2Q15021 1401 aa29.65■■■□□ 2.34
IRF3-228ENST00000601291 WWC1Q8IX03 1113 aa29.64■■■□□ 2.34
IRF3-228ENST00000601291 USHBP1Q8N6Y0 703 aa29.64■■■□□ 2.34
IRF3-228ENST00000601291 RIPK4P57078 832 aa29.64■■■□□ 2.33
IRF3-228ENST00000601291 RGPD2P0DJD1 1756 aa29.63■■■□□ 2.33
IRF3-228ENST00000601291 COL14A1Q05707 1796 aaKnown RBP29.63■■■□□ 2.33
IRF3-228ENST00000601291 GOLGA2Q08379 1002 aa29.63■■■□□ 2.33
IRF3-228ENST00000601291 PHF23Q9BUL5 403 aaPredicted RBP29.63■■■□□ 2.33
IRF3-228ENST00000601291 COL5A2P05997 1499 aaPredicted RBP29.61■■■□□ 2.33
IRF3-228ENST00000601291 FAM83GA6ND36 823 aa29.61■■■□□ 2.33
IRF3-228ENST00000601291 NLRP2Q9NX02 1062 aa29.61■■■□□ 2.33
IRF3-228ENST00000601291 LMOD3Q0VAK6 560 aa29.6■■■□□ 2.33
IRF3-228ENST00000601291 WDR17Q8IZU2 1322 aa29.59■■■□□ 2.33
IRF3-228ENST00000601291 WDR63Q8IWG1 891 aa29.58■■■□□ 2.33
IRF3-228ENST00000601291 GAS2L2Q8NHY3 880 aa29.57■■■□□ 2.32
IRF3-228ENST00000601291 CDCA7LQ96GN5 454 aa29.56■■■□□ 2.32
IRF3-228ENST00000601291 TRIM35Q9UPQ4 493 aa29.56■■■□□ 2.32
IRF3-228ENST00000601291 NUTM2BA6NNL0 878 aaPredicted RBP29.56■■■□□ 2.32
IRF3-228ENST00000601291 NUTM2EB1AL46 878 aaPredicted RBP29.56■■■□□ 2.32
IRF3-228ENST00000601291 NUTM2AQ8IVF1 878 aaPredicted RBP29.56■■■□□ 2.32
IRF3-228ENST00000601291 EVA1CP58658 441 aa29.55■■■□□ 2.32
IRF3-228ENST00000601291 E9PSI1 815 aa29.54■■■□□ 2.32
IRF3-228ENST00000601291 BTG4Q9NY30 223 aa29.54■■■□□ 2.32
IRF3-228ENST00000601291 ADAMTS2O95450 1211 aa29.53■■■□□ 2.32
IRF3-228ENST00000601291 HSPA1LP34931 641 aa29.53■■■□□ 2.32
IRF3-228ENST00000601291 MTHFSDQ2M296 383 aaKnown RBP29.53■■■□□ 2.32
IRF3-228ENST00000601291 TOM1L2Q6ZVM7 507 aa29.53■■■□□ 2.32
IRF3-228ENST00000601291 SPATA31A6Q5VVP1 1343 aa29.53■■■□□ 2.32
IRF3-228ENST00000601291 STRN4Q9NRL3 753 aa29.52■■■□□ 2.32
IRF3-228ENST00000601291 SLFN5Q08AF3 891 aa29.52■■■□□ 2.32
IRF3-228ENST00000601291 PLEKHG2Q9H7P9 1386 aa29.51■■■□□ 2.31
IRF3-228ENST00000601291 CALD1Q05682 793 aaKnown RBP29.51■■■□□ 2.31
IRF3-228ENST00000601291 RAPGEF4Q8WZA2 1011 aa29.51■■■□□ 2.31
IRF3-228ENST00000601291 DLG5Q8TDM6 1919 aa29.51■■■□□ 2.31
IRF3-228ENST00000601291 AMOTQ4VCS5 1084 aa29.5■■■□□ 2.31
IRF3-228ENST00000601291 PLCH1Q4KWH8 1693 aa29.5■■■□□ 2.31
IRF3-228ENST00000601291 PLEKHO1Q53GL0 409 aaPredicted RBP29.49■■■□□ 2.31
IRF3-228ENST00000601291 IL16Q14005 1332 aa29.48■■■□□ 2.31
IRF3-228ENST00000601291 CRB1P82279 1406 aa29.48■■■□□ 2.31
IRF3-228ENST00000601291 TATP17735 454 aaPredicted RBP29.47■■■□□ 2.31
IRF3-228ENST00000601291 CARD10Q9BWT7 1032 aa29.47■■■□□ 2.31
IRF3-228ENST00000601291 DUSP27Q5VZP5 1158 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms