RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	BRWD3	Q6RI45	1802 aa		28.07	■■■□□ 2.08
GTPBP3-223	ENST00000600995	KIF20B	Q96Q89	1820 aa		28.07	■■■□□ 2.08
GTPBP3-223	ENST00000600995	FAM98C	Q17RN3	349 aa	Known RBP	28.07	■■■□□ 2.08
GTPBP3-223	ENST00000600995	LARP1	Q6PKG0	1096 aa	Known RBP	28.07	■■■□□ 2.08
GTPBP3-223	ENST00000600995	AXIN2	Q9Y2T1	843 aa		28.07	■■■□□ 2.08
GTPBP3-223	ENST00000600995	C11orf95	C9JLR9	678 aa	Predicted RBP	28.06	■■■□□ 2.08
GTPBP3-223	ENST00000600995	THRAP3	Q9Y2W1	955 aa	Known RBP	28.06	■■■□□ 2.08
GTPBP3-223	ENST00000600995	BARGIN	Q6ZT62	677 aa		28.05	■■■□□ 2.08
GTPBP3-223	ENST00000600995	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.05	■■■□□ 2.08
GTPBP3-223	ENST00000600995	CRB1	P82279	1406 aa		28.04	■■■□□ 2.08
GTPBP3-223	ENST00000600995	NSD3	Q9BZ95	1437 aa		28.04	■■■□□ 2.08
GTPBP3-223	ENST00000600995	TCP11L2	Q8N4U5	519 aa		28.03	■■■□□ 2.08
GTPBP3-223	ENST00000600995	WDR17	Q8IZU2	1322 aa		28.02	■■■□□ 2.08
GTPBP3-223	ENST00000600995	GGNBP2	Q9H3C7	697 aa		28.02	■■■□□ 2.08
GTPBP3-223	ENST00000600995	THSD7A	Q9UPZ6	1657 aa		28.02	■■■□□ 2.08
GTPBP3-223	ENST00000600995	CGNL1	Q0VF96	1302 aa		28	■■■□□ 2.07
GTPBP3-223	ENST00000600995		A0A0G2JS52	829 aa		28	■■■□□ 2.07
GTPBP3-223	ENST00000600995	MYT1	Q01538	1121 aa		28	■■■□□ 2.07
GTPBP3-223	ENST00000600995	KRT27	Q7Z3Y8	459 aa		28	■■■□□ 2.07
GTPBP3-223	ENST00000600995	USP35	Q9P2H5	1018 aa		28	■■■□□ 2.07
GTPBP3-223	ENST00000600995	TOM1L2	Q6ZVM7	507 aa		27.99	■■■□□ 2.07
GTPBP3-223	ENST00000600995	PANK3	Q9H999	370 aa		27.99	■■■□□ 2.07
GTPBP3-223	ENST00000600995	KIF7	Q2M1P5	1343 aa		27.97	■■■□□ 2.07
GTPBP3-223	ENST00000600995	IP6K1	Q92551	441 aa		27.97	■■■□□ 2.07
GTPBP3-223	ENST00000600995	BLM	P54132	1417 aa	Predicted RBP	27.96	■■■□□ 2.07
GTPBP3-223	ENST00000600995	CSB-PGBD3	P0DP91	1061 aa		27.95	■■■□□ 2.06
GTPBP3-223	ENST00000600995	CCDC125	Q86Z20	511 aa		27.95	■■■□□ 2.06
GTPBP3-223	ENST00000600995	CARD10	Q9BWT7	1032 aa		27.95	■■■□□ 2.06
GTPBP3-223	ENST00000600995	ERBB3	P21860	1342 aa		27.93	■■■□□ 2.06
GTPBP3-223	ENST00000600995	MAP3K19	Q56UN5	1328 aa		27.93	■■■□□ 2.06
GTPBP3-223	ENST00000600995	RTL1	A6NKG5	1358 aa		27.91	■■■□□ 2.06
GTPBP3-223	ENST00000600995	AMPH	P49418	695 aa		27.91	■■■□□ 2.06
GTPBP3-223	ENST00000600995	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.91	■■■□□ 2.06
GTPBP3-223	ENST00000600995	PARP4	Q9UKK3	1724 aa	Known RBP	27.9	■■■□□ 2.06
GTPBP3-223	ENST00000600995	ANKRD26	Q9UPS8	1709 aa		27.9	■■■□□ 2.06
GTPBP3-223	ENST00000600995	KIF24	Q5T7B8	1368 aa		27.9	■■■□□ 2.06
GTPBP3-223	ENST00000600995	CCDC7	Q96M83	1385 aa		27.9	■■■□□ 2.06
GTPBP3-223	ENST00000600995	FBLN1	P23142	703 aa		27.9	■■■□□ 2.06
GTPBP3-223	ENST00000600995	ANKRD24	Q8TF21	1146 aa		27.9	■■■□□ 2.06
GTPBP3-223	ENST00000600995	HOXC9	P31274	260 aa		27.89	■■■□□ 2.06
GTPBP3-223	ENST00000600995	NSD2	O96028	1365 aa		27.88	■■■□□ 2.05
GTPBP3-223	ENST00000600995	WNK3	Q9BYP7	1800 aa		27.88	■■■□□ 2.05
GTPBP3-223	ENST00000600995	FAM208A	Q9UK61	1670 aa	Known RBP	27.87	■■■□□ 2.05
GTPBP3-223	ENST00000600995	PDE3B	Q13370	1112 aa		27.87	■■■□□ 2.05
GTPBP3-223	ENST00000600995	RRS1	Q15050	365 aa	Known RBP	27.87	■■■□□ 2.05
GTPBP3-223	ENST00000600995	KNSTRN	Q9Y448	316 aa		27.87	■■■□□ 2.05
GTPBP3-223	ENST00000600995	MAP2	P11137	1827 aa	Known RBP	27.85	■■■□□ 2.05
GTPBP3-223	ENST00000600995	EP400	Q96L91	3159 aa		27.85	■■■□□ 2.05
GTPBP3-223	ENST00000600995	NLRP2	Q9NX02	1062 aa		27.85	■■■□□ 2.05
GTPBP3-223	ENST00000600995	WASHC2A	Q641Q2	1341 aa		27.84	■■■□□ 2.05
GTPBP3-223	ENST00000600995	FAM196A	Q6ZSG2	479 aa		27.82	■■■□□ 2.04
GTPBP3-223	ENST00000600995	FLT4	P35916	1363 aa		27.82	■■■□□ 2.04
GTPBP3-223	ENST00000600995	DDB1	Q16531	1140 aa		27.81	■■■□□ 2.04
GTPBP3-223	ENST00000600995	DISP2	A7MBM2	1401 aa		27.81	■■■□□ 2.04
GTPBP3-223	ENST00000600995	INSR	P06213	1382 aa		27.8	■■■□□ 2.04
GTPBP3-223	ENST00000600995	LRRC37A3	O60309	1634 aa		27.79	■■■□□ 2.04
GTPBP3-223	ENST00000600995	LTV1	Q96GA3	475 aa	Predicted RBP	27.79	■■■□□ 2.04
GTPBP3-223	ENST00000600995	PEAK1	Q9H792	1746 aa		27.78	■■■□□ 2.04
GTPBP3-223	ENST00000600995	PER1	O15534	1290 aa	Predicted RBP	27.78	■■■□□ 2.04
GTPBP3-223	ENST00000600995	SF3B2	Q13435	895 aa	Known RBP	27.78	■■■□□ 2.04
GTPBP3-223	ENST00000600995	SMG6	Q86US8	1419 aa	Known RBP	27.77	■■■□□ 2.04
GTPBP3-223	ENST00000600995	FAM182B	Q5T319	152 aa		27.77	■■■□□ 2.04
GTPBP3-223	ENST00000600995	EXOC5	O00471	708 aa		27.76	■■■□□ 2.03
GTPBP3-223	ENST00000600995	IL2RB	P14784	551 aa		27.76	■■■□□ 2.03
GTPBP3-223	ENST00000600995	HSP90AB2P	Q58FF8	381 aa		27.76	■■■□□ 2.03
GTPBP3-223	ENST00000600995	AMER1	Q5JTC6	1135 aa	Predicted RBP	27.76	■■■□□ 2.03
GTPBP3-223	ENST00000600995	EMILIN1	Q9Y6C2	1016 aa		27.76	■■■□□ 2.03
GTPBP3-223	ENST00000600995	MORC1	Q86VD1	984 aa		27.75	■■■□□ 2.03
GTPBP3-223	ENST00000600995	POLK	Q9UBT6	870 aa		27.75	■■■□□ 2.03
GTPBP3-223	ENST00000600995	RGPD1	P0DJD0	1748 aa		27.75	■■■□□ 2.03
GTPBP3-223	ENST00000600995	RGPD2	P0DJD1	1756 aa		27.74	■■■□□ 2.03
GTPBP3-223	ENST00000600995	OVOS2	A0A0G2JMS6	1433 aa		27.71	■■■□□ 2.03
GTPBP3-223	ENST00000600995	PPM1G	O15355	546 aa	Predicted RBP	27.71	■■■□□ 2.03
GTPBP3-223	ENST00000600995	ZEB1	P37275	1124 aa	Predicted RBP	27.71	■■■□□ 2.03
GTPBP3-223	ENST00000600995	TNNT2	P45379	298 aa	Predicted RBP	27.71	■■■□□ 2.03
GTPBP3-223	ENST00000600995	TNS2	Q63HR2	1409 aa		27.69	■■■□□ 2.02
GTPBP3-223	ENST00000600995	NBPF6	Q5VWK0	638 aa		27.69	■■■□□ 2.02
GTPBP3-223	ENST00000600995	NBPF4	Q96M43	638 aa		27.69	■■■□□ 2.02
GTPBP3-223	ENST00000600995	NPC1L1	Q9UHC9	1359 aa		27.69	■■■□□ 2.02
GTPBP3-223	ENST00000600995	BCL9	O00512	1426 aa		27.68	■■■□□ 2.02
GTPBP3-223	ENST00000600995	MARCH10	Q8NA82	808 aa	Predicted RBP	27.68	■■■□□ 2.02
GTPBP3-223	ENST00000600995	BAG6	P46379	1132 aa		27.67	■■■□□ 2.02
GTPBP3-223	ENST00000600995	SBF2	Q86WG5	1849 aa		27.66	■■■□□ 2.02
GTPBP3-223	ENST00000600995	TNS1	Q9HBL0	1735 aa	Known RBP	27.65	■■■□□ 2.02
GTPBP3-223	ENST00000600995	TRIM37	O94972	964 aa		27.65	■■■□□ 2.02
GTPBP3-223	ENST00000600995	DEFB132	Q7Z7B7	95 aa		27.62	■■■□□ 2.01
GTPBP3-223	ENST00000600995	RAPGEF4	Q8WZA2	1011 aa		27.61	■■■□□ 2.01
GTPBP3-223	ENST00000600995	CC2D1B	Q5T0F9	858 aa	Known RBP	27.6	■■■□□ 2.01
GTPBP3-223	ENST00000600995	NCAPD2	Q15021	1401 aa		27.59	■■■□□ 2.01
GTPBP3-223	ENST00000600995	TAT	P17735	454 aa	Predicted RBP	27.58	■■■□□ 2.01
GTPBP3-223	ENST00000600995	EIF4A2	Q14240	407 aa	Known RBP	27.58	■■■□□ 2.01
GTPBP3-223	ENST00000600995	USHBP1	Q8N6Y0	703 aa		27.58	■■■□□ 2.01
GTPBP3-223	ENST00000600995	ZCRB1	Q8TBF4	217 aa	Known RBP	27.58	■■■□□ 2.01
GTPBP3-223	ENST00000600995	MEGF6	O75095	1541 aa		27.57	■■■□□ 2
GTPBP3-223	ENST00000600995	APBA3	O96018	575 aa		27.57	■■■□□ 2
GTPBP3-223	ENST00000600995	EYA1	Q99502	592 aa		27.57	■■■□□ 2
GTPBP3-223	ENST00000600995	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.57	■■■□□ 2
GTPBP3-223	ENST00000600995	EN1	Q05925	392 aa	Predicted RBP	27.55	■■■□□ 2
GTPBP3-223	ENST00000600995	PARD3	Q8TEW0	1356 aa		27.55	■■■□□ 2
GTPBP3-223	ENST00000600995	DDX54	Q8TDD1	881 aa	Known RBP	27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms