RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 RTL1A6NKG5 1358 aa30.81■■■□□ 2.52
IRF3-227ENST00000600911 HAP1P54257 671 aaPredicted RBP30.8■■■□□ 2.52
IRF3-227ENST00000600911 IP6K1Q92551 441 aa30.8■■■□□ 2.52
IRF3-227ENST00000600911 LRP6O75581 1613 aa30.8■■■□□ 2.52
IRF3-227ENST00000600911 RGPD1P0DJD0 1748 aa30.79■■■□□ 2.52
IRF3-227ENST00000600911 KIF24Q5T7B8 1368 aa30.79■■■□□ 2.52
IRF3-227ENST00000600911 NUTM2BA6NNL0 878 aaPredicted RBP30.79■■■□□ 2.52
IRF3-227ENST00000600911 NUTM2EB1AL46 878 aaPredicted RBP30.79■■■□□ 2.52
IRF3-227ENST00000600911 IL13P35225 146 aa30.79■■■□□ 2.52
IRF3-227ENST00000600911 EIF4A2Q14240 407 aaKnown RBP30.79■■■□□ 2.52
IRF3-227ENST00000600911 NUTM2AQ8IVF1 878 aaPredicted RBP30.79■■■□□ 2.52
IRF3-227ENST00000600911 FAM9BQ8IZU0 186 aa30.79■■■□□ 2.52
IRF3-227ENST00000600911 CFAP53Q96M91 514 aa30.78■■■□□ 2.52
IRF3-227ENST00000600911 CAMTA1Q9Y6Y1 1673 aa30.78■■■□□ 2.52
IRF3-227ENST00000600911 FAM83GA6ND36 823 aa30.76■■■□□ 2.52
IRF3-227ENST00000600911 DIAPH1O60610 1272 aaKnown RBP30.76■■■□□ 2.51
IRF3-227ENST00000600911 LTV1Q96GA3 475 aaPredicted RBP30.75■■■□□ 2.51
IRF3-227ENST00000600911 PRDM11Q9NQV5 511 aa30.75■■■□□ 2.51
IRF3-227ENST00000600911 ADAMTS2O95450 1211 aa30.74■■■□□ 2.51
IRF3-227ENST00000600911 FBXO41Q8TF61 875 aa30.74■■■□□ 2.51
IRF3-227ENST00000600911 PLCH1Q4KWH8 1693 aa30.74■■■□□ 2.51
IRF3-227ENST00000600911 ABCC6O95255 1503 aa30.73■■■□□ 2.51
IRF3-227ENST00000600911 COL14A1Q05707 1796 aaKnown RBP30.73■■■□□ 2.51
IRF3-227ENST00000600911 ADAMTS8Q9UP79 889 aa30.73■■■□□ 2.51
IRF3-227ENST00000600911 BLMP54132 1417 aaPredicted RBP30.71■■■□□ 2.51
IRF3-227ENST00000600911 U2SURPO15042 1029 aaKnown RBP30.69■■■□□ 2.5
IRF3-227ENST00000600911 ANKRD24Q8TF21 1146 aa30.68■■■□□ 2.5
IRF3-227ENST00000600911 NRAPQ86VF7 1730 aa30.67■■■□□ 2.5
IRF3-227ENST00000600911 COL5A2P05997 1499 aaPredicted RBP30.67■■■□□ 2.5
IRF3-227ENST00000600911 SPATA31A6Q5VVP1 1343 aa30.67■■■□□ 2.5
IRF3-227ENST00000600911 SENP3-EIF4A1A0A087X0R7 540 aa30.66■■■□□ 2.5
IRF3-227ENST00000600911 EYA1Q99502 592 aa30.66■■■□□ 2.5
IRF3-227ENST00000600911 ERBB3P21860 1342 aa30.66■■■□□ 2.5
IRF3-227ENST00000600911 WDR43Q15061 677 aaKnown RBP eCLIP30.65■■■□□ 2.5
IRF3-227ENST00000600911 U2AF1L5P0DN76 240 aaPredicted RBP30.65■■■□□ 2.5
IRF3-227ENST00000600911 U2AF1Q01081 240 aaKnown RBP eCLIP30.65■■■□□ 2.5
IRF3-227ENST00000600911 AEBP1Q8IUX7 1158 aa30.65■■■□□ 2.5
IRF3-227ENST00000600911 HMOX1P09601 288 aa30.64■■■□□ 2.5
IRF3-227ENST00000600911 NBPF6Q5VWK0 638 aa30.63■■■□□ 2.49
IRF3-227ENST00000600911 USHBP1Q8N6Y0 703 aa30.63■■■□□ 2.49
IRF3-227ENST00000600911 NBPF4Q96M43 638 aa30.63■■■□□ 2.49
IRF3-227ENST00000600911 FAM208AQ9UK61 1670 aaKnown RBP30.63■■■□□ 2.49
IRF3-227ENST00000600911 BTG4Q9NY30 223 aa30.62■■■□□ 2.49
IRF3-227ENST00000600911 CCDC146Q8IYE0 955 aa30.62■■■□□ 2.49
IRF3-227ENST00000600911 NUDCQ9Y266 331 aa30.62■■■□□ 2.49
IRF3-227ENST00000600911 IGSF1Q8N6C5 1336 aa30.62■■■□□ 2.49
IRF3-227ENST00000600911 SLIT2O94813 1529 aa30.6■■■□□ 2.49
IRF3-227ENST00000600911 NWD2Q9ULI1 1742 aa30.59■■■□□ 2.49
IRF3-227ENST00000600911 RSPH6AQ9H0K4 717 aa30.58■■■□□ 2.49
IRF3-227ENST00000600911 SULT6B1Q6IMI4 303 aa30.58■■■□□ 2.49
IRF3-227ENST00000600911 NCAPD2Q15021 1401 aa30.57■■■□□ 2.48
IRF3-227ENST00000600911 STRN4Q9NRL3 753 aa30.57■■■□□ 2.48
IRF3-227ENST00000600911 YTHDC1Q96MU7 727 aaKnown RBP30.56■■■□□ 2.48
IRF3-227ENST00000600911 C8orf37Q96NL8 207 aa30.56■■■□□ 2.48
IRF3-227ENST00000600911 LARP1Q6PKG0 1096 aaKnown RBP30.55■■■□□ 2.48
IRF3-227ENST00000600911 PLEKHF1Q96S99 279 aa30.55■■■□□ 2.48
IRF3-227ENST00000600911 KDRP35968 1356 aa30.54■■■□□ 2.48
IRF3-227ENST00000600911 WDR17Q8IZU2 1322 aa30.54■■■□□ 2.48
IRF3-227ENST00000600911 CSB-PGBD3P0DP91 1061 aa30.53■■■□□ 2.48
IRF3-227ENST00000600911 PRKAR2BP31323 418 aa30.52■■■□□ 2.48
IRF3-227ENST00000600911 NLRP2Q9NX02 1062 aa30.51■■■□□ 2.48
IRF3-227ENST00000600911 BCL9LQ86UU0 1499 aa30.51■■■□□ 2.48
IRF3-227ENST00000600911 PHACTR3Q96KR7 559 aa30.5■■■□□ 2.47
IRF3-227ENST00000600911 FCHSD2O94868 740 aa30.49■■■□□ 2.47
IRF3-227ENST00000600911 NGLY1Q96IV0 654 aa30.48■■■□□ 2.47
IRF3-227ENST00000600911 EVA1CP58658 441 aa30.47■■■□□ 2.47
IRF3-227ENST00000600911 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.47■■■□□ 2.47
IRF3-227ENST00000600911 TOM1L2Q6ZVM7 507 aa30.47■■■□□ 2.47
IRF3-227ENST00000600911 CRB1P82279 1406 aa30.46■■■□□ 2.47
IRF3-227ENST00000600911 MEX3CQ5U5Q3 659 aaKnown RBP30.46■■■□□ 2.47
IRF3-227ENST00000600911 FNBP4Q8N3X1 1017 aaPredicted RBP30.46■■■□□ 2.47
IRF3-227ENST00000600911 DLG5Q8TDM6 1919 aa30.46■■■□□ 2.47
IRF3-227ENST00000600911 MEGF6O75095 1541 aa30.45■■■□□ 2.47
IRF3-227ENST00000600911 APAF1O14727 1248 aa30.45■■■□□ 2.47
IRF3-227ENST00000600911 RUNDC1Q96C34 613 aa30.45■■■□□ 2.47
IRF3-227ENST00000600911 WNK3Q9BYP7 1800 aa30.45■■■□□ 2.47
IRF3-227ENST00000600911 HNRNPUQ00839 825 aaKnown RBP eCLIP30.43■■■□□ 2.462e-8■□□□□ 8.3
IRF3-227ENST00000600911 CARD10Q9BWT7 1032 aa30.42■■■□□ 2.46
IRF3-227ENST00000600911 USP35Q9P2H5 1018 aa30.42■■■□□ 2.46
IRF3-227ENST00000600911 RRP7AQ9Y3A4 280 aaKnown RBP30.42■■■□□ 2.46
IRF3-227ENST00000600911 AFF2P51816 1311 aa30.42■■■□□ 2.46
IRF3-227ENST00000600911 UNC5CLQ8IV45 518 aa30.41■■■□□ 2.46
IRF3-227ENST00000600911 TCP11L2Q8N4U5 519 aa30.41■■■□□ 2.46
IRF3-227ENST00000600911 SALL2Q9Y467 1007 aaPredicted RBP30.41■■■□□ 2.46
IRF3-227ENST00000600911 USP21Q9UK80 565 aa30.39■■■□□ 2.46
IRF3-227ENST00000600911 SHANK3Q9BYB0 1731 aa30.37■■■□□ 2.45
IRF3-227ENST00000600911 PARP4Q9UKK3 1724 aaKnown RBP30.37■■■□□ 2.45
IRF3-227ENST00000600911 PKD1L3Q7Z443 1732 aa30.36■■■□□ 2.45
IRF3-227ENST00000600911 SPATA31A1Q5TZJ5 1347 aa30.36■■■□□ 2.45
IRF3-227ENST00000600911 MTHFSDQ2M296 383 aaKnown RBP30.36■■■□□ 2.45
IRF3-227ENST00000600911 SPATA31A5Q5VU36 1347 aa30.35■■■□□ 2.45
IRF3-227ENST00000600911 SPATA31A7Q8IWB4 1347 aa30.35■■■□□ 2.45
IRF3-227ENST00000600911 MAPK8IP3Q9UPT6 1336 aa30.35■■■□□ 2.45
IRF3-227ENST00000600911 NEUROD2Q15784 382 aa30.35■■■□□ 2.45
IRF3-227ENST00000600911 ILDR1Q86SU0 546 aaPredicted RBP30.35■■■□□ 2.45
IRF3-227ENST00000600911 DISP2A7MBM2 1401 aa30.34■■■□□ 2.45
IRF3-227ENST00000600911 TMPOP42166 694 aaKnown RBP30.34■■■□□ 2.45
IRF3-227ENST00000600911 GLI3P10071 1580 aa30.34■■■□□ 2.45
IRF3-227ENST00000600911 VPS72Q15906 364 aa30.32■■■□□ 2.44
IRF3-227ENST00000600911 OVOS2A0A0G2JMS6 1433 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms