RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 CCER2I3L3R5 266 aa27.52■■■□□ 2
PNKP-215ENST00000600910 HSP90AB2PQ58FF8 381 aa27.51■■□□□ 1.99
PNKP-215ENST00000600910 CFAP53Q96M91 514 aa27.51■■□□□ 1.99
PNKP-215ENST00000600910 LRP6O75581 1613 aa27.51■■□□□ 1.99
PNKP-215ENST00000600910 COL18A1P39060 1754 aa27.5■■□□□ 1.99
PNKP-215ENST00000600910 FAM83GA6ND36 823 aa27.5■■□□□ 1.99
PNKP-215ENST00000600910 MRS2Q9HD23 443 aa27.5■■□□□ 1.99
PNKP-215ENST00000600910 AXIN2Q9Y2T1 843 aa27.49■■□□□ 1.99
PNKP-215ENST00000600910 INSRP06213 1382 aa27.49■■□□□ 1.99
PNKP-215ENST00000600910 ABCC6O95255 1503 aa27.49■■□□□ 1.99
PNKP-215ENST00000600910 COL3A1P02461 1466 aaPredicted RBP27.48■■□□□ 1.99
PNKP-215ENST00000600910 LMO7Q8WWI1 1683 aa27.47■■□□□ 1.99
PNKP-215ENST00000600910 BLMP54132 1417 aaPredicted RBP27.47■■□□□ 1.99
PNKP-215ENST00000600910 COL14A1Q05707 1796 aaKnown RBP27.47■■□□□ 1.99
PNKP-215ENST00000600910 RGPD5Q99666 1765 aa27.46■■□□□ 1.99
PNKP-215ENST00000600910 DIAPH1O60610 1272 aaKnown RBP27.44■■□□□ 1.98
PNKP-215ENST00000600910 CAMTA1Q9Y6Y1 1673 aa27.44■■□□□ 1.98
PNKP-215ENST00000600910 EIF4A2Q14240 407 aaKnown RBP27.42■■□□□ 1.98
PNKP-215ENST00000600910 LTV1Q96GA3 475 aaPredicted RBP27.42■■□□□ 1.98
PNKP-215ENST00000600910 PLCH1Q4KWH8 1693 aa27.41■■□□□ 1.98
PNKP-215ENST00000600910 IL13P35225 146 aa27.41■■□□□ 1.98
PNKP-215ENST00000600910 MEX3CQ5U5Q3 659 aaKnown RBP27.41■■□□□ 1.98
PNKP-215ENST00000600910 ANKRD24Q8TF21 1146 aa27.41■■□□□ 1.98
PNKP-215ENST00000600910 C8orf37Q96NL8 207 aa27.41■■□□□ 1.98
PNKP-215ENST00000600910 BTG4Q9NY30 223 aa27.41■■□□□ 1.98
PNKP-215ENST00000600910 ERBB3P21860 1342 aa27.39■■□□□ 1.98
PNKP-215ENST00000600910 COL5A2P05997 1499 aaPredicted RBP27.39■■□□□ 1.97
PNKP-215ENST00000600910 NGLY1Q96IV0 654 aa27.38■■□□□ 1.97
PNKP-215ENST00000600910 NUDCQ9Y266 331 aa27.37■■□□□ 1.97
PNKP-215ENST00000600910 SLIT2O94813 1529 aa27.36■■□□□ 1.97
PNKP-215ENST00000600910 ILDR1Q86SU0 546 aaPredicted RBP27.36■■□□□ 1.97
PNKP-215ENST00000600910 PNISRQ8TF01 805 aaKnown RBP27.36■■□□□ 1.97
PNKP-215ENST00000600910 U2SURPO15042 1029 aaKnown RBP27.35■■□□□ 1.97
PNKP-215ENST00000600910 STRN4Q9NRL3 753 aa27.35■■□□□ 1.97
PNKP-215ENST00000600910 CSB-PGBD3P0DP91 1061 aa27.34■■□□□ 1.97
PNKP-215ENST00000600910 EVA1CP58658 441 aa27.34■■□□□ 1.97
PNKP-215ENST00000600910 WDR43Q15061 677 aaKnown RBP eCLIP27.34■■□□□ 1.97
PNKP-215ENST00000600910 NWD2Q9ULI1 1742 aa27.34■■□□□ 1.97
PNKP-215ENST00000600910 RGPD1P0DJD0 1748 aa27.33■■□□□ 1.97
PNKP-215ENST00000600910 NRAPQ86VF7 1730 aa27.33■■□□□ 1.97
PNKP-215ENST00000600910 WDR17Q8IZU2 1322 aa27.32■■□□□ 1.96
PNKP-215ENST00000600910 FNBP4Q8N3X1 1017 aaPredicted RBP27.32■■□□□ 1.96
PNKP-215ENST00000600910 EYA1Q99502 592 aa27.32■■□□□ 1.96
PNKP-215ENST00000600910 RGPD2P0DJD1 1756 aa27.32■■□□□ 1.96
PNKP-215ENST00000600910 U2AF1L5P0DN76 240 aaPredicted RBP27.31■■□□□ 1.96
PNKP-215ENST00000600910 U2AF1Q01081 240 aaKnown RBP eCLIP27.31■■□□□ 1.969e-9■■■■■ 30
PNKP-215ENST00000600910 FAM208AQ9UK61 1670 aaKnown RBP27.31■■□□□ 1.96
PNKP-215ENST00000600910 NBPF6Q5VWK0 638 aa27.3■■□□□ 1.96
PNKP-215ENST00000600910 FAM9BQ8IZU0 186 aa27.3■■□□□ 1.96
PNKP-215ENST00000600910 NBPF4Q96M43 638 aa27.3■■□□□ 1.96
PNKP-215ENST00000600910 LARP1Q6PKG0 1096 aaKnown RBP27.3■■□□□ 1.96
PNKP-215ENST00000600910 IGSF1Q8N6C5 1336 aa27.29■■□□□ 1.96
PNKP-215ENST00000600910 BCL9LQ86UU0 1499 aa27.29■■□□□ 1.96
PNKP-215ENST00000600910 NLRP2Q9NX02 1062 aa27.29■■□□□ 1.96
PNKP-215ENST00000600910 ADAMTS8Q9UP79 889 aa27.29■■□□□ 1.96
PNKP-215ENST00000600910 TOM1L2Q6ZVM7 507 aa27.28■■□□□ 1.96
PNKP-215ENST00000600910 AFF2P51816 1311 aa27.28■■□□□ 1.96
PNKP-215ENST00000600910 UNC5CLQ8IV45 518 aa27.27■■□□□ 1.96
PNKP-215ENST00000600910 USHBP1Q8N6Y0 703 aa27.27■■□□□ 1.96
PNKP-215ENST00000600910 USP21Q9UK80 565 aa27.27■■□□□ 1.96
PNKP-215ENST00000600910 HMOX1P09601 288 aa27.27■■□□□ 1.96
PNKP-215ENST00000600910 CRB1P82279 1406 aa27.26■■□□□ 1.95
PNKP-215ENST00000600910 SULT6B1Q6IMI4 303 aa27.26■■□□□ 1.95
PNKP-215ENST00000600910 AEBP1Q8IUX7 1158 aa27.25■■□□□ 1.95
PNKP-215ENST00000600910 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.24■■□□□ 1.95
PNKP-215ENST00000600910 NCAPD2Q15021 1401 aa27.23■■□□□ 1.95
PNKP-215ENST00000600910 CARD10Q9BWT7 1032 aa27.23■■□□□ 1.95
PNKP-215ENST00000600910 KDRP35968 1356 aa27.23■■□□□ 1.95
PNKP-215ENST00000600910 FCHSD2O94868 740 aa27.21■■□□□ 1.95
PNKP-215ENST00000600910 RSPH6AQ9H0K4 717 aa27.21■■□□□ 1.95
PNKP-215ENST00000600910 USP35Q9P2H5 1018 aa27.2■■□□□ 1.95
PNKP-215ENST00000600910 VPS72Q15906 364 aa27.19■■□□□ 1.94
PNKP-215ENST00000600910 CCDC9Q9Y3X0 531 aaKnown RBP27.19■■□□□ 1.94
PNKP-215ENST00000600910 PRKAR2BP31323 418 aa27.18■■□□□ 1.94
PNKP-215ENST00000600910 SPATA31A1Q5TZJ5 1347 aa27.17■■□□□ 1.94
PNKP-215ENST00000600910 SPATA31A5Q5VU36 1347 aa27.17■■□□□ 1.94
PNKP-215ENST00000600910 SPATA31A7Q8IWB4 1347 aa27.17■■□□□ 1.94
PNKP-215ENST00000600910 CCDC146Q8IYE0 955 aa27.17■■□□□ 1.94
PNKP-215ENST00000600910 PNNQ9H307 717 aaKnown RBP27.16■■□□□ 1.94
PNKP-215ENST00000600910 PLEKHF1Q96S99 279 aa27.15■■□□□ 1.94
PNKP-215ENST00000600910 ATRNO75882 1429 aa27.14■■□□□ 1.94
PNKP-215ENST00000600910 TCP11L2Q8N4U5 519 aa27.14■■□□□ 1.94
PNKP-215ENST00000600910 TRPC5Q9UL62 973 aaPredicted RBP27.14■■□□□ 1.94
PNKP-215ENST00000600910 RAPGEF4Q8WZA2 1011 aa27.13■■□□□ 1.93
PNKP-215ENST00000600910 RUNDC1Q96C34 613 aa27.12■■□□□ 1.93
PNKP-215ENST00000600910 MEGF6O75095 1541 aa27.12■■□□□ 1.93
PNKP-215ENST00000600910 ZNF772Q68DY9 489 aaPredicted RBP27.12■■□□□ 1.93
PNKP-215ENST00000600910 THRAP3Q9Y2W1 955 aaKnown RBP27.12■■□□□ 1.93
PNKP-215ENST00000600910 QTRT2Q9H974 415 aaKnown RBP27.11■■□□□ 1.93
PNKP-215ENST00000600910 MAPK8IP3Q9UPT6 1336 aa27.1■■□□□ 1.93
PNKP-215ENST00000600910 IL2RBP14784 551 aa27.1■■□□□ 1.93
PNKP-215ENST00000600910 PHACTR3Q96KR7 559 aa27.1■■□□□ 1.93
PNKP-215ENST00000600910 NEFMP07197 916 aa27.09■■□□□ 1.93
PNKP-215ENST00000600910 TATP17735 454 aaPredicted RBP27.09■■□□□ 1.93
PNKP-215ENST00000600910 GJD4Q96KN9 370 aaPredicted RBP27.09■■□□□ 1.93
PNKP-215ENST00000600910 WNK3Q9BYP7 1800 aa27.08■■□□□ 1.93
PNKP-215ENST00000600910 DISP2A7MBM2 1401 aa27.08■■□□□ 1.93
PNKP-215ENST00000600910 GLI3P10071 1580 aa27.08■■□□□ 1.93
PNKP-215ENST00000600910 PARP4Q9UKK3 1724 aaKnown RBP27.08■■□□□ 1.93
PNKP-215ENST00000600910 BARGINQ6ZT62 677 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms