RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 ADGRB1O14514 1584 aa20.32■□□□□ 0.84
HOMER3-212ENST00000600077 POLR3AO14802 1390 aaPredicted RBP20.32■□□□□ 0.84
HOMER3-212ENST00000600077 AATKQ6ZMQ8 1374 aa20.32■□□□□ 0.84
HOMER3-212ENST00000600077 LRRC37A3O60309 1634 aa20.31■□□□□ 0.84
HOMER3-212ENST00000600077 ACEP12821 1306 aa20.29■□□□□ 0.84
HOMER3-212ENST00000600077 TOM1L2Q6ZVM7 507 aa20.29■□□□□ 0.84
HOMER3-212ENST00000600077 MARCH10Q8NA82 808 aaPredicted RBP20.29■□□□□ 0.84
HOMER3-212ENST00000600077 CCDC61Q9Y6R9 512 aa20.27■□□□□ 0.84
HOMER3-212ENST00000600077 PLEKHG3A1L390 1219 aa20.26■□□□□ 0.83
HOMER3-212ENST00000600077 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
HOMER3-212ENST00000600077 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
HOMER3-212ENST00000600077 GRIN3BO60391 1043 aa20.24■□□□□ 0.83
HOMER3-212ENST00000600077 POLD1P28340 1107 aa20.24■□□□□ 0.83
HOMER3-212ENST00000600077 SLC16A10Q8TF71 515 aa20.24■□□□□ 0.83
HOMER3-212ENST00000600077 CDK19Q9BWU1 502 aa20.24■□□□□ 0.83
HOMER3-212ENST00000600077 AKAP12Q02952 1782 aa20.23■□□□□ 0.83
HOMER3-212ENST00000600077 HSPA6P17066 643 aa20.23■□□□□ 0.83
HOMER3-212ENST00000600077 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
HOMER3-212ENST00000600077 EXOC5O00471 708 aa20.22■□□□□ 0.83
HOMER3-212ENST00000600077 KLHL34Q8N239 644 aa20.22■□□□□ 0.83
HOMER3-212ENST00000600077 WDR17Q8IZU2 1322 aa20.21■□□□□ 0.83
HOMER3-212ENST00000600077 BRD4O60885 1362 aaPredicted RBP20.21■□□□□ 0.83
HOMER3-212ENST00000600077 STAC3Q96MF2 364 aa20.18■□□□□ 0.82
HOMER3-212ENST00000600077 TOPAZ1Q8N9V7 1692 aa20.18■□□□□ 0.82
HOMER3-212ENST00000600077 WNK3Q9BYP7 1800 aa20.18■□□□□ 0.82
HOMER3-212ENST00000600077 GPBP1L1Q9HC44 474 aaPredicted RBP20.17■□□□□ 0.82
HOMER3-212ENST00000600077 CARD10Q9BWT7 1032 aa20.16■□□□□ 0.82
HOMER3-212ENST00000600077 NLRP6P59044 892 aa20.15■□□□□ 0.82
HOMER3-212ENST00000600077 ATP10DQ9P241 1426 aa20.15■□□□□ 0.82
HOMER3-212ENST00000600077 PAPPAQ13219 1627 aa20.15■□□□□ 0.82
HOMER3-212ENST00000600077 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
HOMER3-212ENST00000600077 CSB-PGBD3P0DP91 1061 aa20.13■□□□□ 0.81
HOMER3-212ENST00000600077 ZNF827Q17R98 1081 aa20.13■□□□□ 0.81
HOMER3-212ENST00000600077 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
HOMER3-212ENST00000600077 NLGN2Q8NFZ4 835 aa20.12■□□□□ 0.81
HOMER3-212ENST00000600077 AXIN2Q9Y2T1 843 aa20.12■□□□□ 0.81
HOMER3-212ENST00000600077 NHSQ6T4R5 1651 aa20.12■□□□□ 0.81
HOMER3-212ENST00000600077 SLIT3O75094 1523 aa20.12■□□□□ 0.81
HOMER3-212ENST00000600077 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
HOMER3-212ENST00000600077 CCDC7Q96M83 1385 aa20.1■□□□□ 0.81
HOMER3-212ENST00000600077 YBX3P16989 372 aaKnown RBP eCLIP20.1■□□□□ 0.81
HOMER3-212ENST00000600077 COL18A1P39060 1754 aa20.1■□□□□ 0.81
HOMER3-212ENST00000600077 TNS2Q63HR2 1409 aa20.1■□□□□ 0.81
HOMER3-212ENST00000600077 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
HOMER3-212ENST00000600077 ACSBG1Q96GR2 724 aa20.09■□□□□ 0.81
HOMER3-212ENST00000600077 COL24A1Q17RW2 1714 aa20.09■□□□□ 0.81
HOMER3-212ENST00000600077 USP6P35125 1406 aa20.09■□□□□ 0.81
HOMER3-212ENST00000600077 PPIP5K1Q6PFW1 1433 aa20.09■□□□□ 0.81
HOMER3-212ENST00000600077 SLC27A3Q5K4L6 730 aa20.08■□□□□ 0.81
HOMER3-212ENST00000600077 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.8
HOMER3-212ENST00000600077 QSER1Q2KHR3 1735 aa20.07■□□□□ 0.8
HOMER3-212ENST00000600077 KCNH5Q8NCM2 988 aa20.07■□□□□ 0.8
HOMER3-212ENST00000600077 LRRC4BQ9NT99 713 aa20.07■□□□□ 0.8
HOMER3-212ENST00000600077 CPSF1Q10570 1443 aaKnown RBP20.07■□□□□ 0.8
HOMER3-212ENST00000600077 SRPK2P78362 688 aaKnown RBP20.06■□□□□ 0.8
HOMER3-212ENST00000600077 ARHGEF25Q86VW2 580 aa20.06■□□□□ 0.8
HOMER3-212ENST00000600077 PNPLA7Q6ZV29 1317 aa20.05■□□□□ 0.8
HOMER3-212ENST00000600077 TFCP2L1Q9NZI6 479 aa20.05■□□□□ 0.8
HOMER3-212ENST00000600077 APLP1P51693 650 aa20.04■□□□□ 0.8
HOMER3-212ENST00000600077 ABCC6O95255 1503 aa20.03■□□□□ 0.8
HOMER3-212ENST00000600077 TRPM1Q7Z4N2 1603 aa20.03■□□□□ 0.8
HOMER3-212ENST00000600077 BTAF1O14981 1849 aa20.02■□□□□ 0.8
HOMER3-212ENST00000600077 ADCY9O60503 1353 aa20.02■□□□□ 0.8
HOMER3-212ENST00000600077 ZNF526Q8TF50 670 aaPredicted RBP20.01■□□□□ 0.79
HOMER3-212ENST00000600077 RGPD5Q99666 1765 aa19.98■□□□□ 0.79
HOMER3-212ENST00000600077 IL2RBP14784 551 aa19.98■□□□□ 0.79
HOMER3-212ENST00000600077 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
HOMER3-212ENST00000600077 CD2APQ9Y5K6 639 aa19.98■□□□□ 0.79
HOMER3-212ENST00000600077 CABP2Q9NPB3 220 aa19.97■□□□□ 0.79
HOMER3-212ENST00000600077 KAT6BQ8WYB5 2073 aa19.97■□□□□ 0.79
HOMER3-212ENST00000600077 PIK3C2AO00443 1686 aa19.96■□□□□ 0.79
HOMER3-212ENST00000600077 KIF3CO14782 793 aa19.95■□□□□ 0.78
HOMER3-212ENST00000600077 DNAJC5GQ8N7S2 189 aa19.95■□□□□ 0.78
HOMER3-212ENST00000600077 SOX12O15370 315 aa19.94■□□□□ 0.78
HOMER3-212ENST00000600077 MSH5O43196 834 aa19.94■□□□□ 0.78
HOMER3-212ENST00000600077 ZNF692Q9BU19 519 aaPredicted RBP19.93■□□□□ 0.78
HOMER3-212ENST00000600077 NLRP2Q9NX02 1062 aa19.93■□□□□ 0.78
HOMER3-212ENST00000600077 QRICH2Q9H0J4 1663 aa19.92■□□□□ 0.78
HOMER3-212ENST00000600077 TTC21BQ7Z4L5 1316 aa19.91■□□□□ 0.78
HOMER3-212ENST00000600077 TTC21AQ8NDW8 1320 aa19.91■□□□□ 0.78
HOMER3-212ENST00000600077 CENPJQ9HC77 1338 aaPredicted RBP19.91■□□□□ 0.78
HOMER3-212ENST00000600077 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
HOMER3-212ENST00000600077 TOMM70O94826 608 aa19.9■□□□□ 0.78
HOMER3-212ENST00000600077 HMGB2P26583 209 aaKnown RBP19.9■□□□□ 0.78
HOMER3-212ENST00000600077 ERBB3P21860 1342 aa19.9■□□□□ 0.78
HOMER3-212ENST00000600077 COL23A1Q86Y22 540 aaPredicted RBP19.89■□□□□ 0.77
HOMER3-212ENST00000600077 CAPN15O75808 1086 aa19.88■□□□□ 0.77
HOMER3-212ENST00000600077 PRELPP51888 382 aa19.88■□□□□ 0.77
HOMER3-212ENST00000600077 COL13A1Q5TAT6 717 aaPredicted RBP19.88■□□□□ 0.77
HOMER3-212ENST00000600077 KIAA1210Q9ULL0 1709 aa19.88■□□□□ 0.77
HOMER3-212ENST00000600077 NFAT5O94916 1531 aa19.87■□□□□ 0.77
HOMER3-212ENST00000600077 KCNQ4P56696 695 aa19.87■□□□□ 0.77
HOMER3-212ENST00000600077 TNS4Q8IZW8 715 aa19.86■□□□□ 0.77
HOMER3-212ENST00000600077 SYTL4Q96C24 671 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-212ENST00000600077 CCNL1Q9UK58 526 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-212ENST00000600077 MSL1Q68DK7 614 aa19.85■□□□□ 0.77
HOMER3-212ENST00000600077 FLAD1Q8NFF5 587 aa19.85■□□□□ 0.77
HOMER3-212ENST00000600077 DDX54Q8TDD1 881 aaKnown RBP19.85■□□□□ 0.77
HOMER3-212ENST00000600077 ANKRD36BQ8N2N9 1353 aa19.84■□□□□ 0.77
HOMER3-212ENST00000600077 LY75O60449 1722 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms