RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 WDR17Q8IZU2 1322 aa19.58■□□□□ 0.73
IRF3-225ENST00000600022 ANO8Q9HCE9 1232 aaPredicted RBP19.58■□□□□ 0.72
IRF3-225ENST00000600022 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
IRF3-225ENST00000600022 TRPM1Q7Z4N2 1603 aa19.57■□□□□ 0.72
IRF3-225ENST00000600022 ROCK2O75116 1388 aaKnown RBP19.57■□□□□ 0.72
IRF3-225ENST00000600022 LRRC37A3O60309 1634 aa19.56■□□□□ 0.72
IRF3-225ENST00000600022 ZNF692Q9BU19 519 aaPredicted RBP19.56■□□□□ 0.72
IRF3-225ENST00000600022 OVOS2A0A0G2JMS6 1433 aa19.56■□□□□ 0.72
IRF3-225ENST00000600022 OVOS2A0A0J9YW53 1432 aa19.56■□□□□ 0.72
IRF3-225ENST00000600022 OVOS2Q6IE36 1432 aa19.56■□□□□ 0.72
IRF3-225ENST00000600022 PLSCR1O15162 318 aa19.55■□□□□ 0.72
IRF3-225ENST00000600022 CPSF1Q10570 1443 aaKnown RBP19.55■□□□□ 0.72
IRF3-225ENST00000600022 BCL11BQ9C0K0 894 aaPredicted RBP19.55■□□□□ 0.72
IRF3-225ENST00000600022 RGPD5Q99666 1765 aa19.55■□□□□ 0.72
IRF3-225ENST00000600022 KCNQ2O43526 872 aa19.54■□□□□ 0.72
IRF3-225ENST00000600022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.54■□□□□ 0.72
IRF3-225ENST00000600022 SBF2Q86WG5 1849 aa19.53■□□□□ 0.72
IRF3-225ENST00000600022 CSB-PGBD3P0DP91 1061 aa19.53■□□□□ 0.72
IRF3-225ENST00000600022 CARD10Q9BWT7 1032 aa19.53■□□□□ 0.72
IRF3-225ENST00000600022 SPON1Q9HCB6 807 aa19.53■□□□□ 0.72
IRF3-225ENST00000600022 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
IRF3-225ENST00000600022 KTN1Q86UP2 1357 aaKnown RBP19.52■□□□□ 0.72
IRF3-225ENST00000600022 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
IRF3-225ENST00000600022 NME9Q86XW9 330 aa19.51■□□□□ 0.71
IRF3-225ENST00000600022 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
IRF3-225ENST00000600022 NFAT5O94916 1531 aa19.5■□□□□ 0.71
IRF3-225ENST00000600022 AKAP12Q02952 1782 aa19.49■□□□□ 0.71
IRF3-225ENST00000600022 C11orf95C9JLR9 678 aaPredicted RBP19.49■□□□□ 0.71
IRF3-225ENST00000600022 EXOC5O00471 708 aa19.49■□□□□ 0.71
IRF3-225ENST00000600022 PPP1R1BQ9UD71 204 aaPredicted RBP19.49■□□□□ 0.71
IRF3-225ENST00000600022 ZBTB7AO95365 584 aa19.48■□□□□ 0.71
IRF3-225ENST00000600022 SLC12A5Q9H2X9 1139 aa19.48■□□□□ 0.71
IRF3-225ENST00000600022 CD163L1Q9NR16 1453 aa19.48■□□□□ 0.71
IRF3-225ENST00000600022 TXNRD1Q16881 649 aa19.47■□□□□ 0.71
IRF3-225ENST00000600022 CDCA7Q9BWT1 371 aaPredicted RBP19.47■□□□□ 0.71
IRF3-225ENST00000600022 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
IRF3-225ENST00000600022 ACSBG1Q96GR2 724 aa19.46■□□□□ 0.71
IRF3-225ENST00000600022 ATF5Q9Y2D1 282 aaPredicted RBP19.46■□□□□ 0.71
IRF3-225ENST00000600022 WNK3Q9BYP7 1800 aa19.46■□□□□ 0.71
IRF3-225ENST00000600022 SBNO2Q9Y2G9 1366 aa19.45■□□□□ 0.7
IRF3-225ENST00000600022 YY1P25490 414 aa19.45■□□□□ 0.7
IRF3-225ENST00000600022 UTRNP46939 3433 aa19.44■□□□□ 0.7
IRF3-225ENST00000600022 BCL9O00512 1426 aa19.44■□□□□ 0.7
IRF3-225ENST00000600022 PTGER2P43116 358 aa19.44■□□□□ 0.7
IRF3-225ENST00000600022 CARD11Q9BXL7 1154 aa19.44■□□□□ 0.7
IRF3-225ENST00000600022 NLRP2Q9NX02 1062 aa19.44■□□□□ 0.7
IRF3-225ENST00000600022 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
IRF3-225ENST00000600022 CASZ1Q86V15 1759 aa19.42■□□□□ 0.7
IRF3-225ENST00000600022 FBLN1P23142 703 aa19.41■□□□□ 0.7
IRF3-225ENST00000600022 SLC15A2Q16348 729 aa19.41■□□□□ 0.7
IRF3-225ENST00000600022 ANKRD24Q8TF21 1146 aa19.41■□□□□ 0.7
IRF3-225ENST00000600022 ERBB3P21860 1342 aa19.41■□□□□ 0.7
IRF3-225ENST00000600022 RGPD3A6NKT7 1758 aaPredicted RBP19.41■□□□□ 0.7
IRF3-225ENST00000600022 RGPD4Q7Z3J3 1758 aa19.41■□□□□ 0.7
IRF3-225ENST00000600022 CCDC7Q96M83 1385 aa19.41■□□□□ 0.7
IRF3-225ENST00000600022 MON2Q7Z3U7 1717 aa19.4■□□□□ 0.7
IRF3-225ENST00000600022 STK32BQ9NY57 414 aa19.39■□□□□ 0.69
IRF3-225ENST00000600022 TNS2Q63HR2 1409 aa19.39■□□□□ 0.69
IRF3-225ENST00000600022 NINLQ9Y2I6 1382 aa19.38■□□□□ 0.69
IRF3-225ENST00000600022 IL2RBP14784 551 aa19.37■□□□□ 0.69
IRF3-225ENST00000600022 LTV1Q96GA3 475 aaPredicted RBP19.37■□□□□ 0.69
IRF3-225ENST00000600022 A0A1W2PP64 1363 aa19.36■□□□□ 0.69
IRF3-225ENST00000600022 HDGFL2Q7Z4V5 671 aaPredicted RBP19.36■□□□□ 0.69
IRF3-225ENST00000600022 LRRC4BQ9NT99 713 aa19.36■□□□□ 0.69
IRF3-225ENST00000600022 SGIP1Q9BQI5 828 aa19.35■□□□□ 0.69
IRF3-225ENST00000600022 MYOM1P52179 1685 aa19.34■□□□□ 0.69
IRF3-225ENST00000600022 ZNF827Q17R98 1081 aa19.34■□□□□ 0.69
IRF3-225ENST00000600022 TESK2Q96S53 571 aa19.34■□□□□ 0.69
IRF3-225ENST00000600022 FHDC1Q9C0D6 1143 aaPredicted RBP19.34■□□□□ 0.69
IRF3-225ENST00000600022 LTN1O94822 1766 aa19.34■□□□□ 0.69
IRF3-225ENST00000600022 KCNQ4P56696 695 aa19.33■□□□□ 0.68
IRF3-225ENST00000600022 DDX54Q8TDD1 881 aaKnown RBP19.33■□□□□ 0.68
IRF3-225ENST00000600022 SYT17Q9BSW7 474 aa19.33■□□□□ 0.68
IRF3-225ENST00000600022 EDC4Q6P2E9 1401 aaKnown RBP19.33■□□□□ 0.68
IRF3-225ENST00000600022 ABCC6O95255 1503 aa19.32■□□□□ 0.68
IRF3-225ENST00000600022 IP6K1Q92551 441 aa19.32■□□□□ 0.68
IRF3-225ENST00000600022 TERF2IPQ9NYB0 399 aa19.32■□□□□ 0.68
IRF3-225ENST00000600022 USP54Q70EL1 1684 aa19.32■□□□□ 0.68
IRF3-225ENST00000600022 NHSQ6T4R5 1651 aa19.31■□□□□ 0.68
IRF3-225ENST00000600022 ST20-MTHFSA0A0A6YYL1 179 aa19.31■□□□□ 0.68
IRF3-225ENST00000600022 DCAF8L1A6NGE4 600 aa19.3■□□□□ 0.68
IRF3-225ENST00000600022 MTFR1LQ9H019 292 aa19.3■□□□□ 0.68
IRF3-225ENST00000600022 TONSLQ96HA7 1378 aa19.29■□□□□ 0.68
IRF3-225ENST00000600022 MAP3K19Q56UN5 1328 aa19.28■□□□□ 0.68
IRF3-225ENST00000600022 KAT6BQ8WYB5 2073 aa19.28■□□□□ 0.68
IRF3-225ENST00000600022 BTAF1O14981 1849 aa19.28■□□□□ 0.68
IRF3-225ENST00000600022 GOLGB1Q14789 3259 aaKnown RBP19.27■□□□□ 0.68
IRF3-225ENST00000600022 PUS7Q96PZ0 661 aaKnown RBP19.27■□□□□ 0.68
IRF3-225ENST00000600022 PAPPAQ13219 1627 aa19.26■□□□□ 0.67
IRF3-225ENST00000600022 HOXC9P31274 260 aa19.26■□□□□ 0.67
IRF3-225ENST00000600022 PRIM1P49642 420 aaKnown RBP19.26■□□□□ 0.67
IRF3-225ENST00000600022 AKT1S1Q96B36 256 aa19.26■□□□□ 0.67
IRF3-225ENST00000600022 ARXQ96QS3 562 aa19.25■□□□□ 0.67
IRF3-225ENST00000600022 RRS1Q15050 365 aaKnown RBP19.24■□□□□ 0.67
IRF3-225ENST00000600022 SYTL4Q96C24 671 aaPredicted RBP19.24■□□□□ 0.67
IRF3-225ENST00000600022 COG3Q96JB2 828 aa19.24■□□□□ 0.67
IRF3-225ENST00000600022 AMPHP49418 695 aa19.23■□□□□ 0.67
IRF3-225ENST00000600022 USHBP1Q8N6Y0 703 aa19.23■□□□□ 0.67
IRF3-225ENST00000600022 NBPF6Q5VWK0 638 aa19.22■□□□□ 0.67
IRF3-225ENST00000600022 ZNF784Q8NCA9 323 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms