RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 RGPD1P0DJD0 1748 aa11.15□□□□□ -0.62
CHMP2A-205ENST00000600006 FAM208AQ9UK61 1670 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-205ENST00000600006 LARP1Q6PKG0 1096 aaKnown RBP11.15□□□□□ -0.62
CHMP2A-205ENST00000600006 TNS1Q9HBL0 1735 aaKnown RBP11.15□□□□□ -0.63
CHMP2A-205ENST00000600006 EVA1CP58658 441 aa11.14□□□□□ -0.63
CHMP2A-205ENST00000600006 EIF4G2P78344 907 aaKnown RBP eCLIP11.14□□□□□ -0.63
CHMP2A-205ENST00000600006 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
CHMP2A-205ENST00000600006 KRT27Q7Z3Y8 459 aa11.14□□□□□ -0.63
CHMP2A-205ENST00000600006 BLMP54132 1417 aaPredicted RBP11.14□□□□□ -0.63
CHMP2A-205ENST00000600006 WDR17Q8IZU2 1322 aa11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 ANKRD26Q9UPS8 1709 aa11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 A0A0G2JS52 829 aa11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 ZBTB7CA1YPR0 619 aa11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 SOX12O15370 315 aa11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 MYT1Q01538 1121 aa11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 AXIN2Q9Y2T1 843 aa11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 THRAP3Q9Y2W1 955 aaKnown RBP11.13□□□□□ -0.63
CHMP2A-205ENST00000600006 HSPA5P11021 654 aaKnown RBP11.12□□□□□ -0.63
CHMP2A-205ENST00000600006 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
CHMP2A-205ENST00000600006 TCP11L2Q8N4U5 519 aa11.12□□□□□ -0.63
CHMP2A-205ENST00000600006 PEAK1Q9H792 1746 aa11.12□□□□□ -0.63
CHMP2A-205ENST00000600006 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
CHMP2A-205ENST00000600006 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
CHMP2A-205ENST00000600006 EP400Q96L91 3159 aa11.11□□□□□ -0.63
CHMP2A-205ENST00000600006 DISP2A7MBM2 1401 aa11.1□□□□□ -0.63
CHMP2A-205ENST00000600006 COG3Q96JB2 828 aa11.1□□□□□ -0.63
CHMP2A-205ENST00000600006 ERBB3P21860 1342 aa11.09□□□□□ -0.63
CHMP2A-205ENST00000600006 CCDC7Q96M83 1385 aa11.09□□□□□ -0.63
CHMP2A-205ENST00000600006 FYB1O15117 783 aa11.09□□□□□ -0.63
CHMP2A-205ENST00000600006 TOM1L2Q6ZVM7 507 aa11.09□□□□□ -0.63
CHMP2A-205ENST00000600006 CARD14Q9BXL6 1004 aa11.09□□□□□ -0.63
CHMP2A-205ENST00000600006 RTL1A6NKG5 1358 aa11.08□□□□□ -0.64
CHMP2A-205ENST00000600006 SBF2Q86WG5 1849 aa11.08□□□□□ -0.64
CHMP2A-205ENST00000600006 CARD10Q9BWT7 1032 aa11.08□□□□□ -0.64
CHMP2A-205ENST00000600006 RGPD2P0DJD1 1756 aa11.08□□□□□ -0.64
CHMP2A-205ENST00000600006 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
CHMP2A-205ENST00000600006 GGNBP2Q9H3C7 697 aa11.07□□□□□ -0.64
CHMP2A-205ENST00000600006 TNS2Q63HR2 1409 aa11.07□□□□□ -0.64
CHMP2A-205ENST00000600006 CSB-PGBD3P0DP91 1061 aa11.06□□□□□ -0.64
CHMP2A-205ENST00000600006 FAM182BQ5T319 152 aa11.06□□□□□ -0.64
CHMP2A-205ENST00000600006 IP6K1Q92551 441 aa11.06□□□□□ -0.64
CHMP2A-205ENST00000600006 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
CHMP2A-205ENST00000600006 OVOS2A0A0G2JMS6 1433 aa11.06□□□□□ -0.64
CHMP2A-205ENST00000600006 RGPD3A6NKT7 1758 aaPredicted RBP11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 RGPD4Q7Z3J3 1758 aa11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 KIF24Q5T7B8 1368 aa11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 RREB1Q92766 1687 aa11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 PDE3BQ13370 1112 aa11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 ANKRD24Q8TF21 1146 aa11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 CGNL1Q0VF96 1302 aa11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
CHMP2A-205ENST00000600006 BCL9O00512 1426 aa11.04□□□□□ -0.64
CHMP2A-205ENST00000600006 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
CHMP2A-205ENST00000600006 HOXC9P31274 260 aa11.04□□□□□ -0.64
CHMP2A-205ENST00000600006 SF3B2Q13435 895 aaKnown RBP11.04□□□□□ -0.64
CHMP2A-205ENST00000600006 FAM196AQ6ZSG2 479 aa11.04□□□□□ -0.64
CHMP2A-205ENST00000600006 POLR3GLQ9BT43 218 aa11.04□□□□□ -0.64
CHMP2A-205ENST00000600006 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
CHMP2A-205ENST00000600006 FBLN1P23142 703 aa11.03□□□□□ -0.64
CHMP2A-205ENST00000600006 DDB1Q16531 1140 aa11.03□□□□□ -0.64
CHMP2A-205ENST00000600006 DEFB132Q7Z7B7 95 aa11.03□□□□□ -0.64
CHMP2A-205ENST00000600006 NHSQ6T4R5 1651 aa11.03□□□□□ -0.64
CHMP2A-205ENST00000600006 NSD2O96028 1365 aa11.03□□□□□ -0.64
CHMP2A-205ENST00000600006 FLT4P35916 1363 aa11.03□□□□□ -0.64
CHMP2A-205ENST00000600006 NUP188Q5SRE5 1749 aa11.02□□□□□ -0.65
CHMP2A-205ENST00000600006 BAG6P46379 1132 aa11.02□□□□□ -0.65
CHMP2A-205ENST00000600006 RRS1Q15050 365 aaKnown RBP11.02□□□□□ -0.65
CHMP2A-205ENST00000600006 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
CHMP2A-205ENST00000600006 KIF7Q2M1P5 1343 aa11.02□□□□□ -0.65
CHMP2A-205ENST00000600006 INSRP06213 1382 aa11.02□□□□□ -0.65
CHMP2A-205ENST00000600006 SMG6Q86US8 1419 aaKnown RBP11.01□□□□□ -0.65
CHMP2A-205ENST00000600006 AMPHP49418 695 aa11.01□□□□□ -0.65
CHMP2A-205ENST00000600006 TRIM37O94972 964 aa11□□□□□ -0.65
CHMP2A-205ENST00000600006 IL2RBP14784 551 aa11□□□□□ -0.65
CHMP2A-205ENST00000600006 MARCH10Q8NA82 808 aaPredicted RBP11□□□□□ -0.65
CHMP2A-205ENST00000600006 PANK3Q9H999 370 aa11□□□□□ -0.65
CHMP2A-205ENST00000600006 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
CHMP2A-205ENST00000600006 NCAPD2Q15021 1401 aa11□□□□□ -0.65
CHMP2A-205ENST00000600006 MEGF6O75095 1541 aa10.99□□□□□ -0.65
CHMP2A-205ENST00000600006 PKD1L3Q7Z443 1732 aa10.99□□□□□ -0.65
CHMP2A-205ENST00000600006 LTV1Q96GA3 475 aaPredicted RBP10.99□□□□□ -0.65
CHMP2A-205ENST00000600006 DOT1LQ8TEK3 1739 aa10.98□□□□□ -0.65
CHMP2A-205ENST00000600006 EXOC5O00471 708 aa10.98□□□□□ -0.65
CHMP2A-205ENST00000600006 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-205ENST00000600006 EN1Q05925 392 aaPredicted RBP10.98□□□□□ -0.65
CHMP2A-205ENST00000600006 EMILIN1Q9Y6C2 1016 aa10.98□□□□□ -0.65
CHMP2A-205ENST00000600006 HSP90AB2PQ58FF8 381 aa10.97□□□□□ -0.65
CHMP2A-205ENST00000600006 BTAF1O14981 1849 aa10.97□□□□□ -0.65
CHMP2A-205ENST00000600006 WASHC2AQ641Q2 1341 aa10.96□□□□□ -0.65
CHMP2A-205ENST00000600006 APBA3O96018 575 aa10.96□□□□□ -0.65
CHMP2A-205ENST00000600006 CAMKK2Q96RR4 588 aa10.96□□□□□ -0.65
CHMP2A-205ENST00000600006 EZH2Q15910 746 aaKnown RBP10.95□□□□□ -0.66
CHMP2A-205ENST00000600006 NBPF6Q5VWK0 638 aa10.95□□□□□ -0.66
CHMP2A-205ENST00000600006 NBPF4Q96M43 638 aa10.95□□□□□ -0.66
CHMP2A-205ENST00000600006 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
CHMP2A-205ENST00000600006 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
CHMP2A-205ENST00000600006 LRP5O75197 1615 aa10.95□□□□□ -0.66
CHMP2A-205ENST00000600006 AMER1Q5JTC6 1135 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-205ENST00000600006 KNSTRNQ9Y448 316 aa10.94□□□□□ -0.66
CHMP2A-205ENST00000600006 PTF1AQ7RTS3 328 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms