RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 USP35Q9P2H5 1018 aa39.26■■■■□ 3.88
ZNF558-206ENST00000599938 KRT27Q7Z3Y8 459 aa39.25■■■■□ 3.87
ZNF558-206ENST00000599938 ABCC6O95255 1503 aa39.23■■■■□ 3.87
ZNF558-206ENST00000599938 HSPA5P11021 654 aaKnown RBP39.22■■■■□ 3.87
ZNF558-206ENST00000599938 LTN1O94822 1766 aa39.21■■■■□ 3.87
ZNF558-206ENST00000599938 CRB1P82279 1406 aa39.2■■■■□ 3.87
ZNF558-206ENST00000599938 RGPD5Q99666 1765 aa39.2■■■■□ 3.87
ZNF558-206ENST00000599938 AXIN2Q9Y2T1 843 aa39.19■■■■□ 3.86
ZNF558-206ENST00000599938 TCP11L2Q8N4U5 519 aa39.18■■■■□ 3.86
ZNF558-206ENST00000599938 BARGINQ6ZT62 677 aa39.16■■■■□ 3.86
ZNF558-206ENST00000599938 COG3Q96JB2 828 aa39.14■■■■□ 3.86
ZNF558-206ENST00000599938 WDR17Q8IZU2 1322 aa39.14■■■■□ 3.86
ZNF558-206ENST00000599938 POLR3GLQ9BT43 218 aa39.13■■■■□ 3.85
ZNF558-206ENST00000599938 THRAP3Q9Y2W1 955 aaKnown RBP39.13■■■■□ 3.85
ZNF558-206ENST00000599938 KIF20BQ96Q89 1820 aa39.12■■■■□ 3.85
ZNF558-206ENST00000599938 TOM1L2Q6ZVM7 507 aa39.12■■■■□ 3.85
ZNF558-206ENST00000599938 BLMP54132 1417 aaPredicted RBP39.11■■■■□ 3.85
ZNF558-206ENST00000599938 CCDC125Q86Z20 511 aa39.1■■■■□ 3.85
ZNF558-206ENST00000599938 CSB-PGBD3P0DP91 1061 aa39.09■■■■□ 3.85
ZNF558-206ENST00000599938 NSD3Q9BZ95 1437 aa39.07■■■■□ 3.85
ZNF558-206ENST00000599938 PARP4Q9UKK3 1724 aaKnown RBP39.07■■■■□ 3.85
ZNF558-206ENST00000599938 WNK3Q9BYP7 1800 aa39.06■■■■□ 3.84
ZNF558-206ENST00000599938 FYB1O15117 783 aa39.04■■■■□ 3.84
ZNF558-206ENST00000599938 GGNBP2Q9H3C7 697 aa39.04■■■■□ 3.84
ZNF558-206ENST00000599938 FAM182BQ5T319 152 aa39.03■■■■□ 3.84
ZNF558-206ENST00000599938 CARD14Q9BXL6 1004 aa39.02■■■■□ 3.84
ZNF558-206ENST00000599938 ERBB3P21860 1342 aa39■■■■□ 3.83
ZNF558-206ENST00000599938 LRRC37A3O60309 1634 aa39■■■■□ 3.83
ZNF558-206ENST00000599938 PDE3BQ13370 1112 aa38.99■■■■□ 3.83
ZNF558-206ENST00000599938 SF3B2Q13435 895 aaKnown RBP38.99■■■■□ 3.83
ZNF558-206ENST00000599938 CARD10Q9BWT7 1032 aa38.99■■■■□ 3.83
ZNF558-206ENST00000599938 RGPD1P0DJD0 1748 aa38.96■■■■□ 3.83
ZNF558-206ENST00000599938 CCDC7Q96M83 1385 aa38.95■■■■□ 3.83
ZNF558-206ENST00000599938 MAP3K19Q56UN5 1328 aa38.95■■■■□ 3.83
ZNF558-206ENST00000599938 ANKRD24Q8TF21 1146 aa38.94■■■■□ 3.82
ZNF558-206ENST00000599938 IP6K1Q92551 441 aa38.94■■■■□ 3.82
ZNF558-206ENST00000599938 FBLN1P23142 703 aa38.92■■■■□ 3.82
ZNF558-206ENST00000599938 FAM196AQ6ZSG2 479 aa38.91■■■■□ 3.82
ZNF558-206ENST00000599938 CDCA7Q9BWT1 371 aaPredicted RBP38.91■■■■□ 3.82
ZNF558-206ENST00000599938 NLRP2Q9NX02 1062 aa38.91■■■■□ 3.82
ZNF558-206ENST00000599938 FAM208AQ9UK61 1670 aaKnown RBP38.9■■■■□ 3.82
ZNF558-206ENST00000599938 CGNL1Q0VF96 1302 aa38.9■■■■□ 3.82
ZNF558-206ENST00000599938 DISP2A7MBM2 1401 aa38.9■■■■□ 3.82
ZNF558-206ENST00000599938 AMPHP49418 695 aa38.9■■■■□ 3.82
ZNF558-206ENST00000599938 DDB1Q16531 1140 aa38.89■■■■□ 3.82
ZNF558-206ENST00000599938 RTL1A6NKG5 1358 aa38.89■■■■□ 3.82
ZNF558-206ENST00000599938 C11orf95C9JLR9 678 aaPredicted RBP38.88■■■■□ 3.81
ZNF558-206ENST00000599938 RRS1Q15050 365 aaKnown RBP38.88■■■■□ 3.81
ZNF558-206ENST00000599938 DEFB132Q7Z7B7 95 aa38.88■■■■□ 3.81
ZNF558-206ENST00000599938 TNS1Q9HBL0 1735 aaKnown RBP38.88■■■■□ 3.81
ZNF558-206ENST00000599938 HOXC9P31274 260 aa38.87■■■■□ 3.81
ZNF558-206ENST00000599938 LTV1Q96GA3 475 aaPredicted RBP38.85■■■■□ 3.81
ZNF558-206ENST00000599938 OVOS2A0A0G2JMS6 1433 aa38.83■■■■□ 3.81
ZNF558-206ENST00000599938 BAG6P46379 1132 aa38.83■■■■□ 3.81
ZNF558-206ENST00000599938 PANK3Q9H999 370 aa38.82■■■■□ 3.8
ZNF558-206ENST00000599938 PEAK1Q9H792 1746 aa38.81■■■■□ 3.8
ZNF558-206ENST00000599938 ANKRD26Q9UPS8 1709 aa38.81■■■■□ 3.8
ZNF558-206ENST00000599938 TNS2Q63HR2 1409 aa38.8■■■■□ 3.8
ZNF558-206ENST00000599938 TRIM37O94972 964 aa38.8■■■■□ 3.8
ZNF558-206ENST00000599938 KIF7Q2M1P5 1343 aa38.79■■■■□ 3.8
ZNF558-206ENST00000599938 FLT4P35916 1363 aa38.76■■■■□ 3.8
ZNF558-206ENST00000599938 SMG6Q86US8 1419 aaKnown RBP38.75■■■■□ 3.79
ZNF558-206ENST00000599938 KIF24Q5T7B8 1368 aa38.75■■■■□ 3.79
ZNF558-206ENST00000599938 IL2RBP14784 551 aa38.74■■■■□ 3.79
ZNF558-206ENST00000599938 RGPD2P0DJD1 1756 aa38.73■■■■□ 3.79
ZNF558-206ENST00000599938 EXOC5O00471 708 aa38.73■■■■□ 3.79
ZNF558-206ENST00000599938 MARCH10Q8NA82 808 aaPredicted RBP38.71■■■■□ 3.79
ZNF558-206ENST00000599938 INSRP06213 1382 aa38.7■■■■□ 3.79
ZNF558-206ENST00000599938 EN1Q05925 392 aaPredicted RBP38.7■■■■□ 3.79
ZNF558-206ENST00000599938 EMILIN1Q9Y6C2 1016 aa38.7■■■■□ 3.79
ZNF558-206ENST00000599938 SBF2Q86WG5 1849 aa38.69■■■■□ 3.78
ZNF558-206ENST00000599938 NSD2O96028 1365 aa38.69■■■■□ 3.78
ZNF558-206ENST00000599938 HSP90AB2PQ58FF8 381 aa38.67■■■■□ 3.78
ZNF558-206ENST00000599938 MAP2P11137 1827 aaKnown RBP38.66■■■■□ 3.78
ZNF558-206ENST00000599938 APBA3O96018 575 aa38.66■■■■□ 3.78
ZNF558-206ENST00000599938 BCL9O00512 1426 aa38.65■■■■□ 3.78
ZNF558-206ENST00000599938 PPM1GO15355 546 aaPredicted RBP38.64■■■■□ 3.78
ZNF558-206ENST00000599938 TNNT2P45379 298 aaPredicted RBP38.63■■■■□ 3.77
ZNF558-206ENST00000599938 KNSTRNQ9Y448 316 aa38.63■■■■□ 3.77
ZNF558-206ENST00000599938 NBPF6Q5VWK0 638 aa38.6■■■■□ 3.77
ZNF558-206ENST00000599938 NBPF4Q96M43 638 aa38.6■■■■□ 3.77
ZNF558-206ENST00000599938 PARD3Q8TEW0 1356 aa38.59■■■■□ 3.77
ZNF558-206ENST00000599938 EZH2Q15910 746 aaKnown RBP38.59■■■■□ 3.77
ZNF558-206ENST00000599938 MEGF6O75095 1541 aa38.58■■■■□ 3.77
ZNF558-206ENST00000599938 USHBP1Q8N6Y0 703 aa38.58■■■■□ 3.77
ZNF558-206ENST00000599938 POLKQ9UBT6 870 aa38.57■■■■□ 3.76
ZNF558-206ENST00000599938 CAMKK2Q96RR4 588 aa38.56■■■■□ 3.76
ZNF558-206ENST00000599938 WASHC2AQ641Q2 1341 aa38.55■■■■□ 3.76
ZNF558-206ENST00000599938 RREB1Q92766 1687 aa38.55■■■■□ 3.76
ZNF558-206ENST00000599938 BCL11BQ9C0K0 894 aaPredicted RBP38.54■■■■□ 3.76
ZNF558-206ENST00000599938 MORC1Q86VD1 984 aa38.53■■■■□ 3.76
ZNF558-206ENST00000599938 NHSQ6T4R5 1651 aa38.52■■■■□ 3.76
ZNF558-206ENST00000599938 RGPD3A6NKT7 1758 aaPredicted RBP38.52■■■■□ 3.76
ZNF558-206ENST00000599938 RGPD4Q7Z3J3 1758 aa38.52■■■■□ 3.76
ZNF558-206ENST00000599938 SHANK3Q9BYB0 1731 aa38.5■■■■□ 3.75
ZNF558-206ENST00000599938 PTF1AQ7RTS3 328 aa38.5■■■■□ 3.75
ZNF558-206ENST00000599938 RAPGEF4Q8WZA2 1011 aa38.5■■■■□ 3.75
ZNF558-206ENST00000599938 SRCAPQ6ZRS2 3230 aa38.49■■■■□ 3.75
ZNF558-206ENST00000599938 AMER1Q5JTC6 1135 aaPredicted RBP38.49■■■■□ 3.75
ZNF558-206ENST00000599938 NUP188Q5SRE5 1749 aa38.49■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms