RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 CARD14Q9BXL6 1004 aa39■■■■□ 3.83
SSBP4-206ENST00000599699 AXIN2Q9Y2T1 843 aa39■■■■□ 3.83
SSBP4-206ENST00000599699 GGNBP2Q9H3C7 697 aa38.99■■■■□ 3.83
SSBP4-206ENST00000599699 FYB1O15117 783 aa38.98■■■■□ 3.83
SSBP4-206ENST00000599699 NSD3Q9BZ95 1437 aa38.97■■■■□ 3.83
SSBP4-206ENST00000599699 C11orf95C9JLR9 678 aaPredicted RBP38.97■■■■□ 3.83
SSBP4-206ENST00000599699 COL18A1P39060 1754 aa38.95■■■■□ 3.83
SSBP4-206ENST00000599699 CSB-PGBD3P0DP91 1061 aa38.94■■■■□ 3.82
SSBP4-206ENST00000599699 TOM1L2Q6ZVM7 507 aa38.94■■■■□ 3.82
SSBP4-206ENST00000599699 TCP11L2Q8N4U5 519 aa38.93■■■■□ 3.82
SSBP4-206ENST00000599699 KRT27Q7Z3Y8 459 aa38.92■■■■□ 3.82
SSBP4-206ENST00000599699 CRB1P82279 1406 aa38.91■■■■□ 3.82
SSBP4-206ENST00000599699 WDR17Q8IZU2 1322 aa38.89■■■■□ 3.82
SSBP4-206ENST00000599699 BARGINQ6ZT62 677 aa38.88■■■■□ 3.81
SSBP4-206ENST00000599699 THRAP3Q9Y2W1 955 aaKnown RBP38.88■■■■□ 3.81
SSBP4-206ENST00000599699 BRWD3Q6RI45 1802 aa38.87■■■■□ 3.81
SSBP4-206ENST00000599699 PANK3Q9H999 370 aa38.87■■■■□ 3.81
SSBP4-206ENST00000599699 ABCC6O95255 1503 aa38.87■■■■□ 3.81
SSBP4-206ENST00000599699 CGNL1Q0VF96 1302 aa38.87■■■■□ 3.81
SSBP4-206ENST00000599699 FBLN1P23142 703 aa38.86■■■■□ 3.81
SSBP4-206ENST00000599699 LTN1O94822 1766 aa38.85■■■■□ 3.81
SSBP4-206ENST00000599699 KIF7Q2M1P5 1343 aa38.85■■■■□ 3.81
SSBP4-206ENST00000599699 KIF20BQ96Q89 1820 aa38.84■■■■□ 3.81
SSBP4-206ENST00000599699 RGPD5Q99666 1765 aa38.83■■■■□ 3.81
SSBP4-206ENST00000599699 THSD7AQ9UPZ6 1657 aa38.82■■■■□ 3.81
SSBP4-206ENST00000599699 AMPHP49418 695 aa38.82■■■■□ 3.8
SSBP4-206ENST00000599699 MAP3K19Q56UN5 1328 aa38.82■■■■□ 3.8
SSBP4-206ENST00000599699 IP6K1Q92551 441 aa38.81■■■■□ 3.8
SSBP4-206ENST00000599699 ANKRD24Q8TF21 1146 aa38.79■■■■□ 3.8
SSBP4-206ENST00000599699 RRS1Q15050 365 aaKnown RBP38.78■■■■□ 3.8
SSBP4-206ENST00000599699 CARD10Q9BWT7 1032 aa38.78■■■■□ 3.8
SSBP4-206ENST00000599699 ERBB3P21860 1342 aa38.77■■■■□ 3.8
SSBP4-206ENST00000599699 BLMP54132 1417 aaPredicted RBP38.76■■■■□ 3.8
SSBP4-206ENST00000599699 NLRP2Q9NX02 1062 aa38.76■■■■□ 3.8
SSBP4-206ENST00000599699 PDE3BQ13370 1112 aa38.75■■■■□ 3.79
SSBP4-206ENST00000599699 FAM182BQ5T319 152 aa38.75■■■■□ 3.79
SSBP4-206ENST00000599699 LTV1Q96GA3 475 aaPredicted RBP38.75■■■■□ 3.79
SSBP4-206ENST00000599699 EP400Q96L91 3159 aa38.74■■■■□ 3.79
SSBP4-206ENST00000599699 HOXC9P31274 260 aa38.74■■■■□ 3.79
SSBP4-206ENST00000599699 CCDC125Q86Z20 511 aa38.71■■■■□ 3.79
SSBP4-206ENST00000599699 CCDC7Q96M83 1385 aa38.7■■■■□ 3.78
SSBP4-206ENST00000599699 KNSTRNQ9Y448 316 aa38.69■■■■□ 3.78
SSBP4-206ENST00000599699 RTL1A6NKG5 1358 aa38.69■■■■□ 3.78
SSBP4-206ENST00000599699 CDCA7Q9BWT1 371 aaPredicted RBP38.68■■■■□ 3.78
SSBP4-206ENST00000599699 SF3B2Q13435 895 aaKnown RBP38.66■■■■□ 3.78
SSBP4-206ENST00000599699 DDB1Q16531 1140 aa38.65■■■■□ 3.78
SSBP4-206ENST00000599699 TNNT2P45379 298 aaPredicted RBP38.64■■■■□ 3.78
SSBP4-206ENST00000599699 WASHC2AQ641Q2 1341 aa38.63■■■■□ 3.78
SSBP4-206ENST00000599699 PPM1GO15355 546 aaPredicted RBP38.63■■■■□ 3.77
SSBP4-206ENST00000599699 FAM196AQ6ZSG2 479 aa38.62■■■■□ 3.77
SSBP4-206ENST00000599699 EMILIN1Q9Y6C2 1016 aa38.62■■■■□ 3.77
SSBP4-206ENST00000599699 PARP4Q9UKK3 1724 aaKnown RBP38.62■■■■□ 3.77
SSBP4-206ENST00000599699 NSD2O96028 1365 aa38.6■■■■□ 3.77
SSBP4-206ENST00000599699 FLT4P35916 1363 aa38.6■■■■□ 3.77
SSBP4-206ENST00000599699 HSP90AB2PQ58FF8 381 aa38.58■■■■□ 3.77
SSBP4-206ENST00000599699 KIF24Q5T7B8 1368 aa38.57■■■■□ 3.77
SSBP4-206ENST00000599699 DISP2A7MBM2 1401 aa38.57■■■■□ 3.77
SSBP4-206ENST00000599699 SMG6Q86US8 1419 aaKnown RBP38.57■■■■□ 3.77
SSBP4-206ENST00000599699 MORC1Q86VD1 984 aa38.57■■■■□ 3.76
SSBP4-206ENST00000599699 EXOC5O00471 708 aa38.56■■■■□ 3.76
SSBP4-206ENST00000599699 IL2RBP14784 551 aa38.56■■■■□ 3.76
SSBP4-206ENST00000599699 LRRC37A3O60309 1634 aa38.55■■■■□ 3.76
SSBP4-206ENST00000599699 INSRP06213 1382 aa38.55■■■■□ 3.76
SSBP4-206ENST00000599699 WNK3Q9BYP7 1800 aa38.54■■■■□ 3.76
SSBP4-206ENST00000599699 ANKRD26Q9UPS8 1709 aa38.54■■■■□ 3.76
SSBP4-206ENST00000599699 PEAK1Q9H792 1746 aa38.52■■■■□ 3.76
SSBP4-206ENST00000599699 POLKQ9UBT6 870 aa38.52■■■■□ 3.76
SSBP4-206ENST00000599699 FAM208AQ9UK61 1670 aaKnown RBP38.52■■■■□ 3.76
SSBP4-206ENST00000599699 TRIM37O94972 964 aa38.5■■■■□ 3.75
SSBP4-206ENST00000599699 DEFB132Q7Z7B7 95 aa38.5■■■■□ 3.75
SSBP4-206ENST00000599699 AMER1Q5JTC6 1135 aaPredicted RBP38.49■■■■□ 3.75
SSBP4-206ENST00000599699 OVOS2A0A0G2JMS6 1433 aa38.48■■■■□ 3.75
SSBP4-206ENST00000599699 NBPF6Q5VWK0 638 aa38.47■■■■□ 3.75
SSBP4-206ENST00000599699 MARCH10Q8NA82 808 aaPredicted RBP38.47■■■■□ 3.75
SSBP4-206ENST00000599699 NBPF4Q96M43 638 aa38.47■■■■□ 3.75
SSBP4-206ENST00000599699 BAG6P46379 1132 aa38.46■■■■□ 3.75
SSBP4-206ENST00000599699 PER1O15534 1290 aaPredicted RBP38.45■■■■□ 3.75
SSBP4-206ENST00000599699 USHBP1Q8N6Y0 703 aa38.45■■■■□ 3.75
SSBP4-206ENST00000599699 TNS2Q63HR2 1409 aa38.45■■■■□ 3.75
SSBP4-206ENST00000599699 MAP2P11137 1827 aaKnown RBP38.45■■■■□ 3.75
SSBP4-206ENST00000599699 RGPD1P0DJD0 1748 aa38.42■■■■□ 3.74
SSBP4-206ENST00000599699 CC2D1BQ5T0F9 858 aaKnown RBP38.42■■■■□ 3.74
SSBP4-206ENST00000599699 RGPD2P0DJD1 1756 aa38.4■■■■□ 3.74
SSBP4-206ENST00000599699 CNGB1Q14028 1251 aaPredicted RBP38.4■■■■□ 3.74
SSBP4-206ENST00000599699 APBA3O96018 575 aa38.38■■■■□ 3.73
SSBP4-206ENST00000599699 RAPGEF4Q8WZA2 1011 aa38.37■■■■□ 3.73
SSBP4-206ENST00000599699 EN1Q05925 392 aaPredicted RBP38.36■■■■□ 3.73
SSBP4-206ENST00000599699 DDX54Q8TDD1 881 aaKnown RBP38.34■■■■□ 3.73
SSBP4-206ENST00000599699 ZEB1P37275 1124 aaPredicted RBP38.33■■■■□ 3.73
SSBP4-206ENST00000599699 TATP17735 454 aaPredicted RBP38.32■■■■□ 3.72
SSBP4-206ENST00000599699 MEGF6O75095 1541 aa38.32■■■■□ 3.72
SSBP4-206ENST00000599699 TNS1Q9HBL0 1735 aaKnown RBP38.32■■■■□ 3.72
SSBP4-206ENST00000599699 EIF4A2Q14240 407 aaKnown RBP38.31■■■■□ 3.72
SSBP4-206ENST00000599699 ZCRB1Q8TBF4 217 aaKnown RBP38.31■■■■□ 3.72
SSBP4-206ENST00000599699 EYA1Q99502 592 aa38.29■■■■□ 3.72
SSBP4-206ENST00000599699 BCL9O00512 1426 aa38.29■■■■□ 3.72
SSBP4-206ENST00000599699 NPC1L1Q9UHC9 1359 aa38.28■■■■□ 3.72
SSBP4-206ENST00000599699 BCL11BQ9C0K0 894 aaPredicted RBP38.27■■■■□ 3.72
SSBP4-206ENST00000599699 EZH2Q15910 746 aaKnown RBP38.25■■■■□ 3.71
SSBP4-206ENST00000599699 ACSBG1Q96GR2 724 aa38.25■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms