RNA–Protein interactions for RNA: ENST00000599644.1

SIPA1L3-208, Transcript of signal induced proliferation associated 1 like 3, human

TSL 4

Gene SIPA1L3, Length 545 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-208	ENST00000599644	DDB1	Q16531	1140 aa		27.87	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.87	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	TMC1	Q8TDI8	760 aa		27.85	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	TONSL	Q96HA7	1378 aa		27.85	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	NFAT5	O94916	1531 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	CSB-PGBD3	P0DP91	1061 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	LRRC37A3	O60309	1634 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	RREB1	Q92766	1687 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	MON2	Q7Z3U7	1717 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	PEAK1	Q9H792	1746 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	OVOS2	A0A0G2JMS6	1433 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	OVOS2	A0A0J9YW53	1432 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	OVOS2	Q6IE36	1432 aa		27.84	■■■□□ 2.05
SIPA1L3-208	ENST00000599644	C11orf95	C9JLR9	678 aa	Predicted RBP	27.82	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	SLC12A5	Q9H2X9	1139 aa		27.82	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	NUP188	Q5SRE5	1749 aa		27.81	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	NME9	Q86XW9	330 aa		27.81	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	CARD10	Q9BWT7	1032 aa		27.81	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	CD163L1	Q9NR16	1453 aa		27.81	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	MARCH10	Q8NA82	808 aa	Predicted RBP	27.8	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	SBF2	Q86WG5	1849 aa		27.79	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	WNK3	Q9BYP7	1800 aa		27.79	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	NBPF14	Q5TI25	921 aa		27.79	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	PTF1A	Q7RTS3	328 aa		27.79	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.79	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	USP31	Q70CQ4	1352 aa		27.78	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.77	■■■□□ 2.04
SIPA1L3-208	ENST00000599644	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.74	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	EXOC5	O00471	708 aa		27.72	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	PLSCR1	O15162	318 aa		27.72	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	TERF2IP	Q9NYB0	399 aa		27.72	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	EDC4	Q6P2E9	1401 aa	Known RBP	27.71	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	USP54	Q70EL1	1684 aa		27.71	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	ABCC6	O95255	1503 aa		27.71	■■■□□ 2.03
SIPA1L3-208	ENST00000599644		A0A1W2PP64	1363 aa		27.71	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	CCDC7	Q96M83	1385 aa		27.71	■■■□□ 2.03
SIPA1L3-208	ENST00000599644	ST20-MTHFS	A0A0A6YYL1	179 aa		27.69	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	PUS7	Q96PZ0	661 aa	Known RBP	27.69	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	NLRP2	Q9NX02	1062 aa		27.69	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	ERBB3	P21860	1342 aa		27.68	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	LTN1	O94822	1766 aa		27.68	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	BCL9	O00512	1426 aa		27.68	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	TESK2	Q96S53	571 aa		27.68	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.66	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	RGPD4	Q7Z3J3	1758 aa		27.66	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	PROM2	Q8N271	834 aa		27.66	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	ANKRD24	Q8TF21	1146 aa		27.65	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	ANO8	Q9HCE9	1232 aa	Predicted RBP	27.65	■■■□□ 2.02
SIPA1L3-208	ENST00000599644	TNS2	Q63HR2	1409 aa		27.63	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	KCNQ2	O43526	872 aa		27.62	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	TRIM26	Q12899	539 aa	Predicted RBP	27.62	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	SPON1	Q9HCB6	807 aa		27.61	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	IL2RB	P14784	551 aa		27.6	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	ACSBG1	Q96GR2	724 aa		27.59	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	IP6K1	Q92551	441 aa		27.58	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	NINL	Q9Y2I6	1382 aa		27.58	■■■□□ 2.01
SIPA1L3-208	ENST00000599644	TXNRD1	Q16881	649 aa		27.57	■■■□□ 2
SIPA1L3-208	ENST00000599644	LTV1	Q96GA3	475 aa	Predicted RBP	27.57	■■■□□ 2
SIPA1L3-208	ENST00000599644	PDGFD	Q9GZP0	370 aa	Predicted RBP	27.57	■■■□□ 2
SIPA1L3-208	ENST00000599644	PPP1R1B	Q9UD71	204 aa	Predicted RBP	27.57	■■■□□ 2
SIPA1L3-208	ENST00000599644	KAT6B	Q8WYB5	2073 aa		27.56	■■■□□ 2
SIPA1L3-208	ENST00000599644	FBLN1	P23142	703 aa		27.56	■■■□□ 2
SIPA1L3-208	ENST00000599644	SLC24A1	O60721	1099 aa		27.55	■■■□□ 2
SIPA1L3-208	ENST00000599644	COG3	Q96JB2	828 aa		27.55	■■■□□ 2
SIPA1L3-208	ENST00000599644	NHS	Q6T4R5	1651 aa		27.52	■■■□□ 2
SIPA1L3-208	ENST00000599644	CASZ1	Q86V15	1759 aa		27.51	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	MAP3K19	Q56UN5	1328 aa		27.51	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	STK32B	Q9NY57	414 aa		27.51	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	ZBTB7A	O95365	584 aa		27.5	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	ANKRD36B	Q8N2N9	1353 aa		27.49	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	USP47	Q96K76	1375 aa		27.49	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	AMPH	P49418	695 aa		27.49	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	TMF1	P82094	1093 aa		27.49	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	HOXC9	P31274	260 aa		27.48	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	SLC15A2	Q16348	729 aa		27.48	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	DDX54	Q8TDD1	881 aa	Known RBP	27.48	■■□□□ 1.99
SIPA1L3-208	ENST00000599644	GGNBP2	Q9H3C7	697 aa		27.45	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	ATF5	Q9Y2D1	282 aa	Predicted RBP	27.45	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	BTAF1	O14981	1849 aa		27.45	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	FYB1	O15117	783 aa		27.44	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	RRS1	Q15050	365 aa	Known RBP	27.44	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	FAM208A	Q9UK61	1670 aa	Known RBP	27.43	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	RGPD2	P0DJD1	1756 aa		27.43	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	PTGER2	P43116	358 aa		27.41	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	LRRC4B	Q9NT99	713 aa		27.39	■■□□□ 1.98
SIPA1L3-208	ENST00000599644	RTL1	A6NKG5	1358 aa		27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	CDCA8	Q53HL2	280 aa		27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	NBPF6	Q5VWK0	638 aa		27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	USHBP1	Q8N6Y0	703 aa		27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	ZCRB1	Q8TBF4	217 aa	Known RBP	27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	SYTL4	Q96C24	671 aa	Predicted RBP	27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	NBPF4	Q96M43	638 aa		27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	MYOM1	P52179	1685 aa		27.36	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	PAPPA	Q13219	1627 aa		27.35	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	PRIM1	P49642	420 aa	Known RBP	27.35	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	ZNF827	Q17R98	1081 aa		27.35	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	MEGF6	O75095	1541 aa		27.35	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	DCAF8L1	A6NGE4	600 aa		27.34	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	MTFR1L	Q9H019	292 aa		27.34	■■□□□ 1.97
SIPA1L3-208	ENST00000599644	YY1	P25490	414 aa		27.33	■■□□□ 1.97

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms