RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 AKNAQ7Z591 1439 aa14.01□□□□□ -0.17
SCN8A-208ENST00000599343 LRRCC1Q9C099 1032 aa14□□□□□ -0.17
SCN8A-208ENST00000599343 KRT85P78386 507 aa14□□□□□ -0.17
SCN8A-208ENST00000599343 STIM1Q13586 685 aa14□□□□□ -0.17
SCN8A-208ENST00000599343 TRIM22Q8IYM9 498 aa13.99□□□□□ -0.17
SCN8A-208ENST00000599343 ERLIN1O75477 346 aa13.99□□□□□ -0.17
SCN8A-208ENST00000599343 ABTB2Q8N961 1025 aa13.99□□□□□ -0.17
SCN8A-208ENST00000599343 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.99□□□□□ -0.17
SCN8A-208ENST00000599343 MAPK8IP2Q13387 824 aaPredicted RBP13.99□□□□□ -0.17
SCN8A-208ENST00000599343 SPATA32Q96LK8 384 aa13.99□□□□□ -0.17
SCN8A-208ENST00000599343 ANKRD1Q15327 319 aa13.99□□□□□ -0.17
SCN8A-208ENST00000599343 CADPSQ9ULU8 1353 aa13.99□□□□□ -0.17
SCN8A-208ENST00000599343 LRRFIP2Q9Y608 721 aaKnown RBP13.98□□□□□ -0.17
SCN8A-208ENST00000599343 CBFA2T2O43439 604 aa13.98□□□□□ -0.17
SCN8A-208ENST00000599343 LUC7LQ9NQ29 371 aaKnown RBP13.98□□□□□ -0.17
SCN8A-208ENST00000599343 EIF3JO75822 258 aaKnown RBP13.98□□□□□ -0.17
SCN8A-208ENST00000599343 PLEKHO1Q53GL0 409 aaPredicted RBP13.98□□□□□ -0.17
SCN8A-208ENST00000599343 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
SCN8A-208ENST00000599343 CCDC102AQ96A19 550 aa13.98□□□□□ -0.17
SCN8A-208ENST00000599343 CYB5RLQ6IPT4 315 aa13.97□□□□□ -0.17
SCN8A-208ENST00000599343 HDGFL1Q5TGJ6 251 aa13.97□□□□□ -0.17
SCN8A-208ENST00000599343 GOLGA6L7A0A1B0GV03 622 aa13.97□□□□□ -0.17
SCN8A-208ENST00000599343 SSBP05455 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCN8A-208ENST00000599343 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
SCN8A-208ENST00000599343 MYOM3Q5VTT5 1437 aa13.97□□□□□ -0.17
SCN8A-208ENST00000599343 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
SCN8A-208ENST00000599343 BACH2Q9BYV9 841 aa13.97□□□□□ -0.17
SCN8A-208ENST00000599343 ANKRD18AQ8IVF6 992 aa13.96□□□□□ -0.17
SCN8A-208ENST00000599343 PIBF1Q8WXW3 757 aa13.96□□□□□ -0.17
SCN8A-208ENST00000599343 JAKMIP1Q96N16 626 aaKnown RBP13.96□□□□□ -0.17
SCN8A-208ENST00000599343 GNL3LQ9NVN8 582 aaKnown RBP13.96□□□□□ -0.17
SCN8A-208ENST00000599343 NUP62CLQ9H1M0 184 aa13.96□□□□□ -0.17
SCN8A-208ENST00000599343 MYL6BP14649 208 aa13.96□□□□□ -0.18
SCN8A-208ENST00000599343 FKBP4Q02790 459 aaKnown RBP eCLIP13.96□□□□□ -0.18
SCN8A-208ENST00000599343 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.18
SCN8A-208ENST00000599343 AACSQ86V21 672 aa13.96□□□□□ -0.18
SCN8A-208ENST00000599343 CFAP70Q5T0N1 1121 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 CHD1LQ86WJ1 897 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 STRN4Q9NRL3 753 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 CCT4P50991 539 aaKnown RBP13.95□□□□□ -0.18
SCN8A-208ENST00000599343 ESCO1Q5FWF5 840 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 TAF3Q5VWG9 929 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 UPF3BQ9BZI7 483 aaKnown RBP13.95□□□□□ -0.18
SCN8A-208ENST00000599343 SPINK5Q9NQ38 1064 aaPredicted RBP13.95□□□□□ -0.18
SCN8A-208ENST00000599343 DHX8Q14562 1220 aaKnown RBP13.95□□□□□ -0.18
SCN8A-208ENST00000599343 CAMK4Q16566 473 aa13.95□□□□□ -0.18
SCN8A-208ENST00000599343 NOL7Q9UMY1 257 aaKnown RBP13.95□□□□□ -0.18
SCN8A-208ENST00000599343 BLOC1S2Q6QNY1 142 aa13.94□□□□□ -0.18
SCN8A-208ENST00000599343 CEP57L1Q8IYX8 460 aa13.94□□□□□ -0.18
SCN8A-208ENST00000599343 SULT6B1Q6IMI4 303 aa13.94□□□□□ -0.18
SCN8A-208ENST00000599343 KIAA1328Q86T90 577 aa13.94□□□□□ -0.18
SCN8A-208ENST00000599343 TXLNBQ8N3L3 684 aa13.93□□□□□ -0.18
SCN8A-208ENST00000599343 SRCIN1Q9C0H9 1055 aa13.93□□□□□ -0.18
SCN8A-208ENST00000599343 FGD6Q6ZV73 1430 aa13.93□□□□□ -0.18
SCN8A-208ENST00000599343 SYCE3A1L190 88 aa13.93□□□□□ -0.18
SCN8A-208ENST00000599343 IL1RAPL2Q9NP60 686 aa13.93□□□□□ -0.18
SCN8A-208ENST00000599343 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
SCN8A-208ENST00000599343 GPRASP1Q5JY77 1395 aa13.92□□□□□ -0.18
SCN8A-208ENST00000599343 MVPQ14764 893 aaKnown RBP13.92□□□□□ -0.18
SCN8A-208ENST00000599343 MCM4P33991 863 aa13.92□□□□□ -0.18
SCN8A-208ENST00000599343 SMG6Q86US8 1419 aaKnown RBP13.92□□□□□ -0.18
SCN8A-208ENST00000599343 ESPNB1AK53 854 aa13.92□□□□□ -0.18
SCN8A-208ENST00000599343 EPB41L2O43491 1005 aaKnown RBP13.92□□□□□ -0.18
SCN8A-208ENST00000599343 EIF5P55010 431 aaKnown RBP13.92□□□□□ -0.18
SCN8A-208ENST00000599343 CABP4P57796 275 aa13.92□□□□□ -0.18
SCN8A-208ENST00000599343 IQCEQ6IPM2 695 aa13.92□□□□□ -0.18
SCN8A-208ENST00000599343 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 SSR1P43307 286 aaKnown RBP13.91□□□□□ -0.18
SCN8A-208ENST00000599343 RBM5P52756 815 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCN8A-208ENST00000599343 CCDC57Q2TAC2 916 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 PRAM1Q96QH2 718 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 MATR3P43243 847 aaKnown RBP eCLIP13.91□□□□□ -0.18
SCN8A-208ENST00000599343 TDO2P48775 406 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 ATF7IPQ6VMQ6 1270 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 PDCL2Q8N4E4 241 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-208ENST00000599343 CFAP45Q9UL16 551 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 TATP17735 454 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-208ENST00000599343 GBP2P32456 591 aaPredicted RBP13.91□□□□□ -0.18
SCN8A-208ENST00000599343 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
SCN8A-208ENST00000599343 EZRP15311 586 aaKnown RBP13.9□□□□□ -0.18
SCN8A-208ENST00000599343 SRGAP3O43295 1099 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 IBSPP21815 317 aaPredicted RBP13.9□□□□□ -0.18
SCN8A-208ENST00000599343 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 PPP1R1BQ9UD71 204 aaPredicted RBP13.9□□□□□ -0.18
SCN8A-208ENST00000599343 ARHGAP29Q52LW3 1261 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 TAF4BQ92750 862 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 CDKL5O76039 1030 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 CASTP20810 708 aaKnown RBP13.9□□□□□ -0.18
SCN8A-208ENST00000599343 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
SCN8A-208ENST00000599343 NBPF1Q3BBV0 1214 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 ANKRD50Q9ULJ7 1429 aa13.9□□□□□ -0.18
SCN8A-208ENST00000599343 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 NUTM1Q86Y26 1132 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 ZSCAN31Q96LW9 406 aaPredicted RBP13.89□□□□□ -0.19
SCN8A-208ENST00000599343 MPHOSPH8Q99549 860 aa13.89□□□□□ -0.19
SCN8A-208ENST00000599343 ZSCAN25Q6NSZ9 544 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms