RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 AXIN2Q9Y2T1 843 aa21.05■□□□□ 0.96
IRF3-223ENST00000599223 CD163L1Q9NR16 1453 aa21.05■□□□□ 0.96
IRF3-223ENST00000599223 OVOS2A0A0G2JMS6 1433 aa21.04■□□□□ 0.96
IRF3-223ENST00000599223 OVOS2A0A0J9YW53 1432 aa21.04■□□□□ 0.96
IRF3-223ENST00000599223 OVOS2Q6IE36 1432 aa21.04■□□□□ 0.96
IRF3-223ENST00000599223 SBNO2Q9Y2G9 1366 aa21.03■□□□□ 0.96
IRF3-223ENST00000599223 LTN1O94822 1766 aa21.02■□□□□ 0.96
IRF3-223ENST00000599223 SOX12O15370 315 aa21.01■□□□□ 0.95
IRF3-223ENST00000599223 ARHGEF25Q86VW2 580 aa21.01■□□□□ 0.95
IRF3-223ENST00000599223 WDR17Q8IZU2 1322 aa21.01■□□□□ 0.95
IRF3-223ENST00000599223 KTN1Q86UP2 1357 aaKnown RBP21■□□□□ 0.95
IRF3-223ENST00000599223 ABCC6O95255 1503 aa21■□□□□ 0.95
IRF3-223ENST00000599223 TTC21AQ8NDW8 1320 aa21■□□□□ 0.95
IRF3-223ENST00000599223 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
IRF3-223ENST00000599223 PTF1AQ7RTS3 328 aa20.98■□□□□ 0.95
IRF3-223ENST00000599223 ZNF692Q9BU19 519 aaPredicted RBP20.97■□□□□ 0.95
IRF3-223ENST00000599223 DDB1Q16531 1140 aa20.95■□□□□ 0.94
IRF3-223ENST00000599223 KCNH5Q8NCM2 988 aa20.95■□□□□ 0.94
IRF3-223ENST00000599223 CASZ1Q86V15 1759 aa20.95■□□□□ 0.94
IRF3-223ENST00000599223 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
IRF3-223ENST00000599223 USP31Q70CQ4 1352 aa20.94■□□□□ 0.94
IRF3-223ENST00000599223 NME9Q86XW9 330 aa20.93■□□□□ 0.94
IRF3-223ENST00000599223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.93■□□□□ 0.94
IRF3-223ENST00000599223 MARCH10Q8NA82 808 aaPredicted RBP20.93■□□□□ 0.94
IRF3-223ENST00000599223 TNS2Q63HR2 1409 aa20.93■□□□□ 0.94
IRF3-223ENST00000599223 BCL9O00512 1426 aa20.92■□□□□ 0.94
IRF3-223ENST00000599223 A0A1W2PP64 1363 aa20.91■□□□□ 0.94
IRF3-223ENST00000599223 NHSQ6T4R5 1651 aa20.91■□□□□ 0.94
IRF3-223ENST00000599223 CARD10Q9BWT7 1032 aa20.91■□□□□ 0.94
IRF3-223ENST00000599223 TONSLQ96HA7 1378 aa20.9■□□□□ 0.94
IRF3-223ENST00000599223 CSB-PGBD3P0DP91 1061 aa20.9■□□□□ 0.94
IRF3-223ENST00000599223 ANO8Q9HCE9 1232 aaPredicted RBP20.9■□□□□ 0.94
IRF3-223ENST00000599223 EDC4Q6P2E9 1401 aaKnown RBP20.89■□□□□ 0.94
IRF3-223ENST00000599223 CCDC7Q96M83 1385 aa20.88■□□□□ 0.93
IRF3-223ENST00000599223 C11orf95C9JLR9 678 aaPredicted RBP20.88■□□□□ 0.93
IRF3-223ENST00000599223 SLC12A5Q9H2X9 1139 aa20.88■□□□□ 0.93
IRF3-223ENST00000599223 ERBB3P21860 1342 aa20.87■□□□□ 0.93
IRF3-223ENST00000599223 TMC1Q8TDI8 760 aa20.87■□□□□ 0.93
IRF3-223ENST00000599223 CDCA7Q9BWT1 371 aaPredicted RBP20.87■□□□□ 0.93
IRF3-223ENST00000599223 BCL11BQ9C0K0 894 aaPredicted RBP20.87■□□□□ 0.93
IRF3-223ENST00000599223 NBPF14Q5TI25 921 aa20.86■□□□□ 0.93
IRF3-223ENST00000599223 PLSCR1O15162 318 aa20.85■□□□□ 0.93
IRF3-223ENST00000599223 BTAF1O14981 1849 aa20.84■□□□□ 0.93
IRF3-223ENST00000599223 PROM2Q8N271 834 aa20.84■□□□□ 0.93
IRF3-223ENST00000599223 FAM208AQ9UK61 1670 aaKnown RBP20.83■□□□□ 0.93
IRF3-223ENST00000599223 PAPPAQ13219 1627 aa20.83■□□□□ 0.93
IRF3-223ENST00000599223 TESK2Q96S53 571 aa20.83■□□□□ 0.93
IRF3-223ENST00000599223 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.93
IRF3-223ENST00000599223 HDGFL2Q7Z4V5 671 aaPredicted RBP20.82■□□□□ 0.92
IRF3-223ENST00000599223 MYOM1P52179 1685 aa20.82■□□□□ 0.92
IRF3-223ENST00000599223 RGPD2P0DJD1 1756 aa20.81■□□□□ 0.92
IRF3-223ENST00000599223 KCNQ2O43526 872 aa20.8■□□□□ 0.92
IRF3-223ENST00000599223 SHANK3Q9BYB0 1731 aa20.8■□□□□ 0.92
IRF3-223ENST00000599223 EXOC5O00471 708 aa20.79■□□□□ 0.92
IRF3-223ENST00000599223 ANKRD24Q8TF21 1146 aa20.79■□□□□ 0.92
IRF3-223ENST00000599223 NLRP2Q9NX02 1062 aa20.79■□□□□ 0.92
IRF3-223ENST00000599223 SPON1Q9HCB6 807 aa20.78■□□□□ 0.92
IRF3-223ENST00000599223 TERF2IPQ9NYB0 399 aa20.78■□□□□ 0.92
IRF3-223ENST00000599223 ST20-MTHFSA0A0A6YYL1 179 aa20.77■□□□□ 0.92
IRF3-223ENST00000599223 TXNRD1Q16881 649 aa20.77■□□□□ 0.92
IRF3-223ENST00000599223 NINLQ9Y2I6 1382 aa20.76■□□□□ 0.91
IRF3-223ENST00000599223 PUS7Q96PZ0 661 aaKnown RBP20.76■□□□□ 0.91
IRF3-223ENST00000599223 IL2RBP14784 551 aa20.75■□□□□ 0.91
IRF3-223ENST00000599223 ACSBG1Q96GR2 724 aa20.75■□□□□ 0.91
IRF3-223ENST00000599223 DOT1LQ8TEK3 1739 aa20.75■□□□□ 0.91
IRF3-223ENST00000599223 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
IRF3-223ENST00000599223 KIF20BQ96Q89 1820 aa20.73■□□□□ 0.91
IRF3-223ENST00000599223 ZBTB7AO95365 584 aa20.72■□□□□ 0.91
IRF3-223ENST00000599223 FBLN1P23142 703 aa20.72■□□□□ 0.91
IRF3-223ENST00000599223 PPP1R1BQ9UD71 204 aaPredicted RBP20.72■□□□□ 0.91
IRF3-223ENST00000599223 MAP3K19Q56UN5 1328 aa20.72■□□□□ 0.91
IRF3-223ENST00000599223 ANKRD36BQ8N2N9 1353 aa20.72■□□□□ 0.91
IRF3-223ENST00000599223 IP6K1Q92551 441 aa20.71■□□□□ 0.91
IRF3-223ENST00000599223 TUBGCP6Q96RT7 1819 aa20.71■□□□□ 0.91
IRF3-223ENST00000599223 USP47Q96K76 1375 aa20.71■□□□□ 0.91
IRF3-223ENST00000599223 MEGF6O75095 1541 aa20.7■□□□□ 0.9
IRF3-223ENST00000599223 PTGER2P43116 358 aa20.7■□□□□ 0.9
IRF3-223ENST00000599223 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
IRF3-223ENST00000599223 UTRNP46939 3433 aa20.69■□□□□ 0.9
IRF3-223ENST00000599223 SLC15A2Q16348 729 aa20.69■□□□□ 0.9
IRF3-223ENST00000599223 STK32BQ9NY57 414 aa20.68■□□□□ 0.9
IRF3-223ENST00000599223 HOXC9P31274 260 aa20.67■□□□□ 0.9
IRF3-223ENST00000599223 COG3Q96JB2 828 aa20.67■□□□□ 0.9
IRF3-223ENST00000599223 QSER1Q2KHR3 1735 aa20.67■□□□□ 0.9
IRF3-223ENST00000599223 LY75O60449 1722 aa20.66■□□□□ 0.9
IRF3-223ENST00000599223 RTL1A6NKG5 1358 aa20.65■□□□□ 0.9
IRF3-223ENST00000599223 ZNF827Q17R98 1081 aa20.65■□□□□ 0.9
IRF3-223ENST00000599223 ATF5Q9Y2D1 282 aaPredicted RBP20.65■□□□□ 0.9
IRF3-223ENST00000599223 NSD2O96028 1365 aa20.64■□□□□ 0.89
IRF3-223ENST00000599223 LRRC4BQ9NT99 713 aa20.64■□□□□ 0.89
IRF3-223ENST00000599223 RRS1Q15050 365 aaKnown RBP20.63■□□□□ 0.89
IRF3-223ENST00000599223 SGIP1Q9BQI5 828 aa20.63■□□□□ 0.89
IRF3-223ENST00000599223 DDX54Q8TDD1 881 aaKnown RBP20.62■□□□□ 0.89
IRF3-223ENST00000599223 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
IRF3-223ENST00000599223 COL24A1Q17RW2 1714 aa20.61■□□□□ 0.89
IRF3-223ENST00000599223 FYB1O15117 783 aa20.61■□□□□ 0.89
IRF3-223ENST00000599223 AMPHP49418 695 aa20.61■□□□□ 0.89
IRF3-223ENST00000599223 TRIM26Q12899 539 aaPredicted RBP20.61■□□□□ 0.89
IRF3-223ENST00000599223 ANKRD26Q9UPS8 1709 aa20.61■□□□□ 0.89
IRF3-223ENST00000599223 YY1P25490 414 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms