RNA–Protein interactions for RNA: ENST00000599220.1

TMEM143-210, Transcript of transmembrane protein 143, humanhuman

TSL 3

Gene TMEM143, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-210ENST00000599220 AKAP12Q02952 1782 aa23.46■■□□□ 1.35
TMEM143-210ENST00000599220 OVOS2Q6IE36 1432 aa23.46■■□□□ 1.35
TMEM143-210ENST00000599220 KTN1Q86UP2 1357 aaKnown RBP23.46■■□□□ 1.35
TMEM143-210ENST00000599220 RREB1Q92766 1687 aa23.46■■□□□ 1.35
TMEM143-210ENST00000599220 CSB-PGBD3P0DP91 1061 aa23.45■■□□□ 1.34
TMEM143-210ENST00000599220 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
TMEM143-210ENST00000599220 LRRC37A3O60309 1634 aa23.44■■□□□ 1.34
TMEM143-210ENST00000599220 CARD11Q9BXL7 1154 aa23.43■■□□□ 1.34
TMEM143-210ENST00000599220 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.42■■□□□ 1.34
TMEM143-210ENST00000599220 RGPD5Q99666 1765 aa23.42■■□□□ 1.34
TMEM143-210ENST00000599220 PEAK1Q9H792 1746 aa23.42■■□□□ 1.34
TMEM143-210ENST00000599220 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
TMEM143-210ENST00000599220 MARCH10Q8NA82 808 aaPredicted RBP23.4■■□□□ 1.34
TMEM143-210ENST00000599220 TMC1Q8TDI8 760 aa23.4■■□□□ 1.34
TMEM143-210ENST00000599220 CDCA7Q9BWT1 371 aaPredicted RBP23.4■■□□□ 1.34
TMEM143-210ENST00000599220 CARD10Q9BWT7 1032 aa23.4■■□□□ 1.34
TMEM143-210ENST00000599220 NFAT5O94916 1531 aa23.38■■□□□ 1.33
TMEM143-210ENST00000599220 BCL11BQ9C0K0 894 aaPredicted RBP23.38■■□□□ 1.33
TMEM143-210ENST00000599220 SBNO2Q9Y2G9 1366 aa23.38■■□□□ 1.33
TMEM143-210ENST00000599220 SBF2Q86WG5 1849 aa23.38■■□□□ 1.33
TMEM143-210ENST00000599220 PLSCR1O15162 318 aa23.37■■□□□ 1.33
TMEM143-210ENST00000599220 WNK3Q9BYP7 1800 aa23.37■■□□□ 1.33
TMEM143-210ENST00000599220 NME9Q86XW9 330 aa23.36■■□□□ 1.33
TMEM143-210ENST00000599220 MON2Q7Z3U7 1717 aa23.36■■□□□ 1.33
TMEM143-210ENST00000599220 EXOC5O00471 708 aa23.35■■□□□ 1.33
TMEM143-210ENST00000599220 SLC12A5Q9H2X9 1139 aa23.35■■□□□ 1.33
TMEM143-210ENST00000599220 HDGFL2Q7Z4V5 671 aaPredicted RBP23.34■■□□□ 1.33
TMEM143-210ENST00000599220 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
TMEM143-210ENST00000599220 CD163L1Q9NR16 1453 aa23.33■■□□□ 1.33
TMEM143-210ENST00000599220 USP31Q70CQ4 1352 aa23.33■■□□□ 1.33
TMEM143-210ENST00000599220 SPON1Q9HCB6 807 aa23.33■■□□□ 1.33
TMEM143-210ENST00000599220 CCDC7Q96M83 1385 aa23.32■■□□□ 1.32
TMEM143-210ENST00000599220 ANO8Q9HCE9 1232 aaPredicted RBP23.32■■□□□ 1.32
TMEM143-210ENST00000599220 KCNQ2O43526 872 aa23.31■■□□□ 1.32
TMEM143-210ENST00000599220 PPP1R1BQ9UD71 204 aaPredicted RBP23.31■■□□□ 1.32
TMEM143-210ENST00000599220 BCL9O00512 1426 aa23.31■■□□□ 1.32
TMEM143-210ENST00000599220 PROM2Q8N271 834 aa23.3■■□□□ 1.32
TMEM143-210ENST00000599220 NLRP2Q9NX02 1062 aa23.3■■□□□ 1.32
TMEM143-210ENST00000599220 RGPD3A6NKT7 1758 aaPredicted RBP23.29■■□□□ 1.32
TMEM143-210ENST00000599220 RGPD4Q7Z3J3 1758 aa23.29■■□□□ 1.32
TMEM143-210ENST00000599220 ABCC6O95255 1503 aa23.29■■□□□ 1.32
TMEM143-210ENST00000599220 ERBB3P21860 1342 aa23.29■■□□□ 1.32
TMEM143-210ENST00000599220 TERF2IPQ9NYB0 399 aa23.28■■□□□ 1.32
TMEM143-210ENST00000599220 A0A1W2PP64 1363 aa23.27■■□□□ 1.31
TMEM143-210ENST00000599220 TNS2Q63HR2 1409 aa23.26■■□□□ 1.31
TMEM143-210ENST00000599220 EDC4Q6P2E9 1401 aaKnown RBP23.26■■□□□ 1.31
TMEM143-210ENST00000599220 ANKRD24Q8TF21 1146 aa23.26■■□□□ 1.31
TMEM143-210ENST00000599220 USP54Q70EL1 1684 aa23.25■■□□□ 1.31
TMEM143-210ENST00000599220 TXNRD1Q16881 649 aa23.25■■□□□ 1.31
TMEM143-210ENST00000599220 PDGFDQ9GZP0 370 aaPredicted RBP23.25■■□□□ 1.31
TMEM143-210ENST00000599220 LTN1O94822 1766 aa23.24■■□□□ 1.31
TMEM143-210ENST00000599220 IL2RBP14784 551 aa23.24■■□□□ 1.31
TMEM143-210ENST00000599220 ACSBG1Q96GR2 724 aa23.24■■□□□ 1.31
TMEM143-210ENST00000599220 PUS7Q96PZ0 661 aaKnown RBP23.23■■□□□ 1.31
TMEM143-210ENST00000599220 ST20-MTHFSA0A0A6YYL1 179 aa23.21■■□□□ 1.31
TMEM143-210ENST00000599220 ZBTB7AO95365 584 aa23.21■■□□□ 1.31
TMEM143-210ENST00000599220 STK32BQ9NY57 414 aa23.21■■□□□ 1.31
TMEM143-210ENST00000599220 TESK2Q96S53 571 aa23.2■■□□□ 1.3
TMEM143-210ENST00000599220 LTV1Q96GA3 475 aaPredicted RBP23.19■■□□□ 1.3
TMEM143-210ENST00000599220 CASZ1Q86V15 1759 aa23.19■■□□□ 1.3
TMEM143-210ENST00000599220 SLC15A2Q16348 729 aa23.18■■□□□ 1.3
TMEM143-210ENST00000599220 NINLQ9Y2I6 1382 aa23.17■■□□□ 1.3
TMEM143-210ENST00000599220 IP6K1Q92551 441 aa23.17■■□□□ 1.3
TMEM143-210ENST00000599220 ATF5Q9Y2D1 282 aaPredicted RBP23.17■■□□□ 1.3
TMEM143-210ENST00000599220 NHSQ6T4R5 1651 aa23.16■■□□□ 1.3
TMEM143-210ENST00000599220 KAT6BQ8WYB5 2073 aa23.15■■□□□ 1.3
TMEM143-210ENST00000599220 DCAF8L1A6NGE4 600 aa23.15■■□□□ 1.3
TMEM143-210ENST00000599220 FBLN1P23142 703 aa23.15■■□□□ 1.3
TMEM143-210ENST00000599220 YY1P25490 414 aa23.15■■□□□ 1.3
TMEM143-210ENST00000599220 COG3Q96JB2 828 aa23.15■■□□□ 1.3
TMEM143-210ENST00000599220 DDX54Q8TDD1 881 aaKnown RBP23.13■■□□□ 1.29
TMEM143-210ENST00000599220 PTGER2P43116 358 aa23.12■■□□□ 1.29
TMEM143-210ENST00000599220 AMPHP49418 695 aa23.12■■□□□ 1.29
TMEM143-210ENST00000599220 MAP3K19Q56UN5 1328 aa23.11■■□□□ 1.29
TMEM143-210ENST00000599220 SLC24A1O60721 1099 aa23.11■■□□□ 1.29
TMEM143-210ENST00000599220 HOXC9P31274 260 aa23.1■■□□□ 1.29
TMEM143-210ENST00000599220 BTAF1O14981 1849 aa23.09■■□□□ 1.29
TMEM143-210ENST00000599220 MTFR1LQ9H019 292 aa23.08■■□□□ 1.29
TMEM143-210ENST00000599220 ANKRD36BQ8N2N9 1353 aa23.08■■□□□ 1.29
TMEM143-210ENST00000599220 MYOM1P52179 1685 aa23.07■■□□□ 1.28
TMEM143-210ENST00000599220 TMF1P82094 1093 aa23.06■■□□□ 1.28
TMEM143-210ENST00000599220 LRRC4BQ9NT99 713 aa23.06■■□□□ 1.28
TMEM143-210ENST00000599220 FAM208AQ9UK61 1670 aaKnown RBP23.06■■□□□ 1.28
TMEM143-210ENST00000599220 RRS1Q15050 365 aaKnown RBP23.05■■□□□ 1.28
TMEM143-210ENST00000599220 ZNF827Q17R98 1081 aa23.05■■□□□ 1.28
TMEM143-210ENST00000599220 SYTL4Q96C24 671 aaPredicted RBP23.05■■□□□ 1.28
TMEM143-210ENST00000599220 GGNBP2Q9H3C7 697 aa23.05■■□□□ 1.28
TMEM143-210ENST00000599220 USP47Q96K76 1375 aa23.04■■□□□ 1.28
TMEM143-210ENST00000599220 TRIM26Q12899 539 aaPredicted RBP23.04■■□□□ 1.28
TMEM143-210ENST00000599220 FHDC1Q9C0D6 1143 aaPredicted RBP23.04■■□□□ 1.28
TMEM143-210ENST00000599220 FYB1O15117 783 aa23.03■■□□□ 1.28
TMEM143-210ENST00000599220 PAPPAQ13219 1627 aa23.03■■□□□ 1.28
TMEM143-210ENST00000599220 PRIM1P49642 420 aaKnown RBP23.02■■□□□ 1.28
TMEM143-210ENST00000599220 ZCRB1Q8TBF4 217 aaKnown RBP23.02■■□□□ 1.28
TMEM143-210ENST00000599220 SGIP1Q9BQI5 828 aa23.02■■□□□ 1.28
TMEM143-210ENST00000599220 SYT17Q9BSW7 474 aa23.02■■□□□ 1.28
TMEM143-210ENST00000599220 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
TMEM143-210ENST00000599220 KCNQ4P56696 695 aa23■■□□□ 1.27
TMEM143-210ENST00000599220 NBPF6Q5VWK0 638 aa23■■□□□ 1.27
TMEM143-210ENST00000599220 NBPF4Q96M43 638 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms