RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
PDE4C-213ENST00000598111 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
PDE4C-213ENST00000598111 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
PDE4C-213ENST00000598111 CRB1P82279 1406 aa17.13■□□□□ 0.33
PDE4C-213ENST00000598111 ARHGEF25Q86VW2 580 aa17.12■□□□□ 0.33
PDE4C-213ENST00000598111 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
PDE4C-213ENST00000598111 ONECUT3O60422 494 aaPredicted RBP17.11■□□□□ 0.33
PDE4C-213ENST00000598111 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
PDE4C-213ENST00000598111 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
PDE4C-213ENST00000598111 COG3Q96JB2 828 aa17.1■□□□□ 0.33
PDE4C-213ENST00000598111 FAM208AQ9UK61 1670 aaKnown RBP17.1■□□□□ 0.33
PDE4C-213ENST00000598111 KRT27Q7Z3Y8 459 aa17.09■□□□□ 0.33
PDE4C-213ENST00000598111 TCP11L2Q8N4U5 519 aa17.09■□□□□ 0.33
PDE4C-213ENST00000598111 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
PDE4C-213ENST00000598111 WDR17Q8IZU2 1322 aa17.08■□□□□ 0.32
PDE4C-213ENST00000598111 ANKRD26Q9UPS8 1709 aa17.07■□□□□ 0.32
PDE4C-213ENST00000598111 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
PDE4C-213ENST00000598111 CSB-PGBD3P0DP91 1061 aa17.07■□□□□ 0.32
PDE4C-213ENST00000598111 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
PDE4C-213ENST00000598111 TOM1L2Q6ZVM7 507 aa17.07■□□□□ 0.32
PDE4C-213ENST00000598111 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
PDE4C-213ENST00000598111 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
PDE4C-213ENST00000598111 AXIN2Q9Y2T1 843 aa17.06■□□□□ 0.32
PDE4C-213ENST00000598111 BLMP54132 1417 aaPredicted RBP17.05■□□□□ 0.32
PDE4C-213ENST00000598111 GGNBP2Q9H3C7 697 aa17.04■□□□□ 0.32
PDE4C-213ENST00000598111 ERBB3P21860 1342 aa17.03■□□□□ 0.32
PDE4C-213ENST00000598111 FYB1O15117 783 aa17.03■□□□□ 0.32
PDE4C-213ENST00000598111 CGNL1Q0VF96 1302 aa17.02■□□□□ 0.32
PDE4C-213ENST00000598111 CCDC125Q86Z20 511 aa17.02■□□□□ 0.32
PDE4C-213ENST00000598111 CARD14Q9BXL6 1004 aa17.02■□□□□ 0.32
PDE4C-213ENST00000598111 RTL1A6NKG5 1358 aa17.02■□□□□ 0.31
PDE4C-213ENST00000598111 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
PDE4C-213ENST00000598111 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
PDE4C-213ENST00000598111 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
PDE4C-213ENST00000598111 MAP3K19Q56UN5 1328 aa17■□□□□ 0.31
PDE4C-213ENST00000598111 AMPHP49418 695 aa17■□□□□ 0.31
PDE4C-213ENST00000598111 PDE3BQ13370 1112 aa17■□□□□ 0.31
PDE4C-213ENST00000598111 CARD10Q9BWT7 1032 aa17■□□□□ 0.31
PDE4C-213ENST00000598111 EP400Q96L91 3159 aa16.99■□□□□ 0.31
PDE4C-213ENST00000598111 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
PDE4C-213ENST00000598111 RGPD2P0DJD1 1756 aa16.99■□□□□ 0.31
PDE4C-213ENST00000598111 PEAK1Q9H792 1746 aa16.99■□□□□ 0.31
PDE4C-213ENST00000598111 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
PDE4C-213ENST00000598111 FAM182BQ5T319 152 aa16.98■□□□□ 0.31
PDE4C-213ENST00000598111 IP6K1Q92551 441 aa16.98■□□□□ 0.31
PDE4C-213ENST00000598111 CDCA7Q9BWT1 371 aaPredicted RBP16.98■□□□□ 0.31
PDE4C-213ENST00000598111 NLRP2Q9NX02 1062 aa16.98■□□□□ 0.31
PDE4C-213ENST00000598111 DISP2A7MBM2 1401 aa16.97■□□□□ 0.31
PDE4C-213ENST00000598111 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
PDE4C-213ENST00000598111 RRS1Q15050 365 aaKnown RBP16.97■□□□□ 0.31
PDE4C-213ENST00000598111 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
PDE4C-213ENST00000598111 C11orf95C9JLR9 678 aaPredicted RBP16.96■□□□□ 0.31
PDE4C-213ENST00000598111 HOXC9P31274 260 aa16.96■□□□□ 0.31
PDE4C-213ENST00000598111 DDB1Q16531 1140 aa16.96■□□□□ 0.31
PDE4C-213ENST00000598111 PANK3Q9H999 370 aa16.96■□□□□ 0.31
PDE4C-213ENST00000598111 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.3
PDE4C-213ENST00000598111 TNS2Q63HR2 1409 aa16.96■□□□□ 0.3
PDE4C-213ENST00000598111 NSD2O96028 1365 aa16.95■□□□□ 0.3
PDE4C-213ENST00000598111 FLT4P35916 1363 aa16.95■□□□□ 0.3
PDE4C-213ENST00000598111 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
PDE4C-213ENST00000598111 FBLN1P23142 703 aa16.95■□□□□ 0.3
PDE4C-213ENST00000598111 FAM196AQ6ZSG2 479 aa16.95■□□□□ 0.3
PDE4C-213ENST00000598111 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
PDE4C-213ENST00000598111 SBF2Q86WG5 1849 aa16.95■□□□□ 0.3
PDE4C-213ENST00000598111 BAG6P46379 1132 aa16.93■□□□□ 0.3
PDE4C-213ENST00000598111 INSRP06213 1382 aa16.91■□□□□ 0.3
PDE4C-213ENST00000598111 IL2RBP14784 551 aa16.91■□□□□ 0.3
PDE4C-213ENST00000598111 KNSTRNQ9Y448 316 aa16.91■□□□□ 0.3
PDE4C-213ENST00000598111 TRIM37O94972 964 aa16.9■□□□□ 0.3
PDE4C-213ENST00000598111 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
PDE4C-213ENST00000598111 EXOC5O00471 708 aa16.89■□□□□ 0.29
PDE4C-213ENST00000598111 PPM1GO15355 546 aaPredicted RBP16.89■□□□□ 0.29
PDE4C-213ENST00000598111 EMILIN1Q9Y6C2 1016 aa16.89■□□□□ 0.29
PDE4C-213ENST00000598111 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
PDE4C-213ENST00000598111 NHSQ6T4R5 1651 aa16.88■□□□□ 0.29
PDE4C-213ENST00000598111 SHANK3Q9BYB0 1731 aa16.87■□□□□ 0.29
PDE4C-213ENST00000598111 RGPD3A6NKT7 1758 aaPredicted RBP16.87■□□□□ 0.29
PDE4C-213ENST00000598111 RGPD4Q7Z3J3 1758 aa16.87■□□□□ 0.29
PDE4C-213ENST00000598111 RREB1Q92766 1687 aa16.87■□□□□ 0.29
PDE4C-213ENST00000598111 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
PDE4C-213ENST00000598111 BCL9O00512 1426 aa16.86■□□□□ 0.29
PDE4C-213ENST00000598111 MEGF6O75095 1541 aa16.86■□□□□ 0.29
PDE4C-213ENST00000598111 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
PDE4C-213ENST00000598111 MARCH10Q8NA82 808 aaPredicted RBP16.85■□□□□ 0.29
PDE4C-213ENST00000598111 WASHC2AQ641Q2 1341 aa16.85■□□□□ 0.29
PDE4C-213ENST00000598111 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
PDE4C-213ENST00000598111 APBA3O96018 575 aa16.84■□□□□ 0.29
PDE4C-213ENST00000598111 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
PDE4C-213ENST00000598111 EN1Q05925 392 aaPredicted RBP16.83■□□□□ 0.28
PDE4C-213ENST00000598111 NUP188Q5SRE5 1749 aa16.83■□□□□ 0.28
PDE4C-213ENST00000598111 DOT1LQ8TEK3 1739 aa16.83■□□□□ 0.28
PDE4C-213ENST00000598111 POLKQ9UBT6 870 aa16.83■□□□□ 0.28
PDE4C-213ENST00000598111 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
PDE4C-213ENST00000598111 NBPF6Q5VWK0 638 aa16.82■□□□□ 0.28
PDE4C-213ENST00000598111 USHBP1Q8N6Y0 703 aa16.82■□□□□ 0.28
PDE4C-213ENST00000598111 RAPGEF4Q8WZA2 1011 aa16.82■□□□□ 0.28
PDE4C-213ENST00000598111 NBPF4Q96M43 638 aa16.82■□□□□ 0.28
PDE4C-213ENST00000598111 AMER1Q5JTC6 1135 aaPredicted RBP16.81■□□□□ 0.28
PDE4C-213ENST00000598111 BTAF1O14981 1849 aa16.81■□□□□ 0.28
PDE4C-213ENST00000598111 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms