RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RGPD3A6NKT7 1758 aaPredicted RBP24.26■■□□□ 1.47
PNKP-210ENST00000597965 RGPD4Q7Z3J3 1758 aa24.26■■□□□ 1.47
PNKP-210ENST00000597965 AKAP12Q02952 1782 aa24.25■■□□□ 1.47
PNKP-210ENST00000597965 ARHGEF25Q86VW2 580 aa24.25■■□□□ 1.47
PNKP-210ENST00000597965 SIN3AQ96ST3 1273 aa24.25■■□□□ 1.47
PNKP-210ENST00000597965 LRRC37A3O60309 1634 aa24.24■■□□□ 1.47
PNKP-210ENST00000597965 COL18A1P39060 1754 aa24.24■■□□□ 1.47
PNKP-210ENST00000597965 BCL11BQ9C0K0 894 aaPredicted RBP24.24■■□□□ 1.47
PNKP-210ENST00000597965 CSB-PGBD3P0DP91 1061 aa24.23■■□□□ 1.47
PNKP-210ENST00000597965 AXIN2Q9Y2T1 843 aa24.23■■□□□ 1.47
PNKP-210ENST00000597965 KTN1Q86UP2 1357 aaKnown RBP24.23■■□□□ 1.47
PNKP-210ENST00000597965 PEAK1Q9H792 1746 aa24.23■■□□□ 1.47
PNKP-210ENST00000597965 BCL9O00512 1426 aa24.22■■□□□ 1.47
PNKP-210ENST00000597965 CARD10Q9BWT7 1032 aa24.22■■□□□ 1.47
PNKP-210ENST00000597965 ABCC6O95255 1503 aa24.21■■□□□ 1.47
PNKP-210ENST00000597965 SBNO2Q9Y2G9 1366 aa24.21■■□□□ 1.47
PNKP-210ENST00000597965 SPON1Q9HCB6 807 aa24.21■■□□□ 1.47
PNKP-210ENST00000597965 SBF2Q86WG5 1849 aa24.21■■□□□ 1.47
PNKP-210ENST00000597965 PPP1R1BQ9UD71 204 aaPredicted RBP24.2■■□□□ 1.46
PNKP-210ENST00000597965 WNK3Q9BYP7 1800 aa24.19■■□□□ 1.46
PNKP-210ENST00000597965 CCDC7Q96M83 1385 aa24.19■■□□□ 1.46
PNKP-210ENST00000597965 DCAF8L1A6NGE4 600 aa24.18■■□□□ 1.46
PNKP-210ENST00000597965 SOX12O15370 315 aa24.18■■□□□ 1.46
PNKP-210ENST00000597965 EXOC5O00471 708 aa24.17■■□□□ 1.46
PNKP-210ENST00000597965 KCNQ2O43526 872 aa24.17■■□□□ 1.46
PNKP-210ENST00000597965 MARCH10Q8NA82 808 aaPredicted RBP24.15■■□□□ 1.46
PNKP-210ENST00000597965 CARD11Q9BXL7 1154 aa24.15■■□□□ 1.46
PNKP-210ENST00000597965 RGPD5Q99666 1765 aa24.15■■□□□ 1.46
PNKP-210ENST00000597965 MON2Q7Z3U7 1717 aa24.15■■□□□ 1.46
PNKP-210ENST00000597965 NFAT5O94916 1531 aa24.15■■□□□ 1.46
PNKP-210ENST00000597965 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.45
PNKP-210ENST00000597965 USP31Q70CQ4 1352 aa24.14■■□□□ 1.45
PNKP-210ENST00000597965 NINLQ9Y2I6 1382 aa24.12■■□□□ 1.45
PNKP-210ENST00000597965 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.11■■□□□ 1.45
PNKP-210ENST00000597965 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
PNKP-210ENST00000597965 TERF2IPQ9NYB0 399 aa24.1■■□□□ 1.45
PNKP-210ENST00000597965 USP54Q70EL1 1684 aa24.09■■□□□ 1.45
PNKP-210ENST00000597965 SLC24A1O60721 1099 aa24.09■■□□□ 1.45
PNKP-210ENST00000597965 PUS7Q96PZ0 661 aaKnown RBP24.09■■□□□ 1.45
PNKP-210ENST00000597965 TNS2Q63HR2 1409 aa24.09■■□□□ 1.45
PNKP-210ENST00000597965 ERBB3P21860 1342 aa24.08■■□□□ 1.44
PNKP-210ENST00000597965 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
PNKP-210ENST00000597965 NLRP2Q9NX02 1062 aa24.06■■□□□ 1.44
PNKP-210ENST00000597965 STK32BQ9NY57 414 aa24.06■■□□□ 1.44
PNKP-210ENST00000597965 EDC4Q6P2E9 1401 aaKnown RBP24.06■■□□□ 1.44
PNKP-210ENST00000597965 TXNRD1Q16881 649 aa24.05■■□□□ 1.44
PNKP-210ENST00000597965 LTN1O94822 1766 aa24.04■■□□□ 1.44
PNKP-210ENST00000597965 IL2RBP14784 551 aa24.04■■□□□ 1.44
PNKP-210ENST00000597965 NME9Q86XW9 330 aa24.04■■□□□ 1.44
PNKP-210ENST00000597965 PROM2Q8N271 834 aa24.04■■□□□ 1.44
PNKP-210ENST00000597965 ANO8Q9HCE9 1232 aaPredicted RBP24.04■■□□□ 1.44
PNKP-210ENST00000597965 CD163L1Q9NR16 1453 aa24.04■■□□□ 1.44
PNKP-210ENST00000597965 PTF1AQ7RTS3 328 aa24.03■■□□□ 1.44
PNKP-210ENST00000597965 CASZ1Q86V15 1759 aa24.02■■□□□ 1.44
PNKP-210ENST00000597965 YY1P25490 414 aa24.02■■□□□ 1.44
PNKP-210ENST00000597965 SLC12A5Q9H2X9 1139 aa24.02■■□□□ 1.44
PNKP-210ENST00000597965 NHSQ6T4R5 1651 aa24■■□□□ 1.43
PNKP-210ENST00000597965 SLC15A2Q16348 729 aa24■■□□□ 1.43
PNKP-210ENST00000597965 ANKRD24Q8TF21 1146 aa24■■□□□ 1.43
PNKP-210ENST00000597965 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
PNKP-210ENST00000597965 ZBTB7AO95365 584 aa23.96■■□□□ 1.43
PNKP-210ENST00000597965 IP6K1Q92551 441 aa23.95■■□□□ 1.42
PNKP-210ENST00000597965 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
PNKP-210ENST00000597965 MTFR1LQ9H019 292 aa23.95■■□□□ 1.42
PNKP-210ENST00000597965 FAM208AQ9UK61 1670 aaKnown RBP23.95■■□□□ 1.42
PNKP-210ENST00000597965 COG3Q96JB2 828 aa23.94■■□□□ 1.42
PNKP-210ENST00000597965 KAT6BQ8WYB5 2073 aa23.93■■□□□ 1.42
PNKP-210ENST00000597965 PTGER2P43116 358 aa23.92■■□□□ 1.42
PNKP-210ENST00000597965 PDGFDQ9GZP0 370 aaPredicted RBP23.91■■□□□ 1.42
PNKP-210ENST00000597965 ATF5Q9Y2D1 282 aaPredicted RBP23.91■■□□□ 1.42
PNKP-210ENST00000597965 BTAF1O14981 1849 aa23.89■■□□□ 1.42
PNKP-210ENST00000597965 ST20-MTHFSA0A0A6YYL1 179 aa23.88■■□□□ 1.41
PNKP-210ENST00000597965 AMPHP49418 695 aa23.88■■□□□ 1.41
PNKP-210ENST00000597965 SLC27A3Q5K4L6 730 aa23.88■■□□□ 1.41
PNKP-210ENST00000597965 TESK2Q96S53 571 aa23.88■■□□□ 1.41
PNKP-210ENST00000597965 MYOM1P52179 1685 aa23.88■■□□□ 1.41
PNKP-210ENST00000597965 DDX54Q8TDD1 881 aaKnown RBP23.86■■□□□ 1.41
PNKP-210ENST00000597965 LTV1Q96GA3 475 aaPredicted RBP23.86■■□□□ 1.41
PNKP-210ENST00000597965 SYT17Q9BSW7 474 aa23.85■■□□□ 1.41
PNKP-210ENST00000597965 ANKRD36BQ8N2N9 1353 aa23.85■■□□□ 1.41
PNKP-210ENST00000597965 PAPPAQ13219 1627 aa23.84■■□□□ 1.41
PNKP-210ENST00000597965 HOXC9P31274 260 aa23.84■■□□□ 1.41
PNKP-210ENST00000597965 FHDC1Q9C0D6 1143 aaPredicted RBP23.84■■□□□ 1.41
PNKP-210ENST00000597965 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
PNKP-210ENST00000597965 RTL1A6NKG5 1358 aa23.83■■□□□ 1.41
PNKP-210ENST00000597965 TMF1P82094 1093 aa23.83■■□□□ 1.41
PNKP-210ENST00000597965 SLC16A10Q8TF71 515 aa23.83■■□□□ 1.41
PNKP-210ENST00000597965 HMGB2P26583 209 aaKnown RBP23.82■■□□□ 1.4
PNKP-210ENST00000597965 CDCA8Q53HL2 280 aa23.82■■□□□ 1.4
PNKP-210ENST00000597965 ARXQ96QS3 562 aa23.82■■□□□ 1.4
PNKP-210ENST00000597965 SGIP1Q9BQI5 828 aa23.82■■□□□ 1.4
PNKP-210ENST00000597965 CGNL1Q0VF96 1302 aa23.82■■□□□ 1.4
PNKP-210ENST00000597965 SMG6Q86US8 1419 aaKnown RBP23.8■■□□□ 1.4
PNKP-210ENST00000597965 ZCRB1Q8TBF4 217 aaKnown RBP23.8■■□□□ 1.4
PNKP-210ENST00000597965 SYTL4Q96C24 671 aaPredicted RBP23.8■■□□□ 1.4
PNKP-210ENST00000597965 MAP3K5Q99683 1374 aa23.79■■□□□ 1.4
PNKP-210ENST00000597965 LRRC4BQ9NT99 713 aa23.79■■□□□ 1.4
PNKP-210ENST00000597965 QSER1Q2KHR3 1735 aa23.77■■□□□ 1.4
PNKP-210ENST00000597965 POLD1P28340 1107 aa23.77■■□□□ 1.4
PNKP-210ENST00000597965 ZNF827Q17R98 1081 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms