RNA–Protein interactions for RNA: ENST00000597704.1

KHSRP-209, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-209ENST00000597704 KIF20BQ96Q89 1820 aa22.24■■□□□ 1.15
KHSRP-209ENST00000597704 PARP4Q9UKK3 1724 aaKnown RBP22.24■■□□□ 1.15
KHSRP-209ENST00000597704 A0A0G2JS52 829 aa22.24■■□□□ 1.15
KHSRP-209ENST00000597704 SOX12O15370 315 aa22.24■■□□□ 1.15
KHSRP-209ENST00000597704 MYT1Q01538 1121 aa22.24■■□□□ 1.15
KHSRP-209ENST00000597704 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
KHSRP-209ENST00000597704 AXIN2Q9Y2T1 843 aa22.23■■□□□ 1.15
KHSRP-209ENST00000597704 BARGINQ6ZT62 677 aa22.22■■□□□ 1.15
KHSRP-209ENST00000597704 CRB1P82279 1406 aa22.22■■□□□ 1.15
KHSRP-209ENST00000597704 USP35Q9P2H5 1018 aa22.21■■□□□ 1.15
KHSRP-209ENST00000597704 CCDC125Q86Z20 511 aa22.2■■□□□ 1.14
KHSRP-209ENST00000597704 TCP11L2Q8N4U5 519 aa22.2■■□□□ 1.14
KHSRP-209ENST00000597704 BLMP54132 1417 aaPredicted RBP22.19■■□□□ 1.14
KHSRP-209ENST00000597704 RGPD1P0DJD0 1748 aa22.19■■□□□ 1.14
KHSRP-209ENST00000597704 THRAP3Q9Y2W1 955 aaKnown RBP22.18■■□□□ 1.14
KHSRP-209ENST00000597704 WDR17Q8IZU2 1322 aa22.17■■□□□ 1.14
KHSRP-209ENST00000597704 EIF4G2P78344 907 aaKnown RBP eCLIP22.17■■□□□ 1.14
KHSRP-209ENST00000597704 TNS1Q9HBL0 1735 aaKnown RBP22.17■■□□□ 1.14
KHSRP-209ENST00000597704 HSPA5P11021 654 aaKnown RBP22.16■■□□□ 1.14
KHSRP-209ENST00000597704 LRRC37A3O60309 1634 aa22.16■■□□□ 1.14
KHSRP-209ENST00000597704 FAM182BQ5T319 152 aa22.14■■□□□ 1.13
KHSRP-209ENST00000597704 TOM1L2Q6ZVM7 507 aa22.14■■□□□ 1.13
KHSRP-209ENST00000597704 SBF2Q86WG5 1849 aa22.14■■□□□ 1.13
KHSRP-209ENST00000597704 RGPD2P0DJD1 1756 aa22.12■■□□□ 1.13
KHSRP-209ENST00000597704 FAM208AQ9UK61 1670 aaKnown RBP22.12■■□□□ 1.13
KHSRP-209ENST00000597704 COG3Q96JB2 828 aa22.12■■□□□ 1.13
KHSRP-209ENST00000597704 PEAK1Q9H792 1746 aa22.11■■□□□ 1.13
KHSRP-209ENST00000597704 FYB1O15117 783 aa22.11■■□□□ 1.13
KHSRP-209ENST00000597704 CARD14Q9BXL6 1004 aa22.11■■□□□ 1.13
KHSRP-209ENST00000597704 CARD10Q9BWT7 1032 aa22.1■■□□□ 1.13
KHSRP-209ENST00000597704 KAT6BQ8WYB5 2073 aa22.1■■□□□ 1.13
KHSRP-209ENST00000597704 NSD3Q9BZ95 1437 aa22.09■■□□□ 1.13
KHSRP-209ENST00000597704 MAP2P11137 1827 aaKnown RBP22.09■■□□□ 1.13
KHSRP-209ENST00000597704 CSB-PGBD3P0DP91 1061 aa22.09■■□□□ 1.13
KHSRP-209ENST00000597704 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
KHSRP-209ENST00000597704 ERBB3P21860 1342 aa22.08■■□□□ 1.13
KHSRP-209ENST00000597704 DISP2A7MBM2 1401 aa22.08■■□□□ 1.13
KHSRP-209ENST00000597704 DEFB132Q7Z7B7 95 aa22.08■■□□□ 1.13
KHSRP-209ENST00000597704 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
KHSRP-209ENST00000597704 FBLN1P23142 703 aa22.07■■□□□ 1.12
KHSRP-209ENST00000597704 PDE3BQ13370 1112 aa22.07■■□□□ 1.12
KHSRP-209ENST00000597704 SF3B2Q13435 895 aaKnown RBP22.07■■□□□ 1.12
KHSRP-209ENST00000597704 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
KHSRP-209ENST00000597704 FAM196AQ6ZSG2 479 aa22.06■■□□□ 1.12
KHSRP-209ENST00000597704 IP6K1Q92551 441 aa22.06■■□□□ 1.12
KHSRP-209ENST00000597704 CCDC7Q96M83 1385 aa22.06■■□□□ 1.12
KHSRP-209ENST00000597704 ANKRD24Q8TF21 1146 aa22.04■■□□□ 1.12
KHSRP-209ENST00000597704 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
KHSRP-209ENST00000597704 CDCA7Q9BWT1 371 aaPredicted RBP22.03■■□□□ 1.12
KHSRP-209ENST00000597704 C11orf95C9JLR9 678 aaPredicted RBP22.02■■□□□ 1.12
KHSRP-209ENST00000597704 DDB1Q16531 1140 aa22.02■■□□□ 1.12
KHSRP-209ENST00000597704 HOXC9P31274 260 aa22.01■■□□□ 1.11
KHSRP-209ENST00000597704 NLRP2Q9NX02 1062 aa22.01■■□□□ 1.11
KHSRP-209ENST00000597704 RTL1A6NKG5 1358 aa22■■□□□ 1.11
KHSRP-209ENST00000597704 OVOS2A0A0G2JMS6 1433 aa22■■□□□ 1.11
KHSRP-209ENST00000597704 TRIM37O94972 964 aa22■■□□□ 1.11
KHSRP-209ENST00000597704 BAG6P46379 1132 aa22■■□□□ 1.11
KHSRP-209ENST00000597704 RRS1Q15050 365 aaKnown RBP22■■□□□ 1.11
KHSRP-209ENST00000597704 AMPHP49418 695 aa21.99■■□□□ 1.11
KHSRP-209ENST00000597704 RREB1Q92766 1687 aa21.98■■□□□ 1.11
KHSRP-209ENST00000597704 TNS2Q63HR2 1409 aa21.97■■□□□ 1.11
KHSRP-209ENST00000597704 MARCH10Q8NA82 808 aaPredicted RBP21.97■■□□□ 1.11
KHSRP-209ENST00000597704 LTV1Q96GA3 475 aaPredicted RBP21.97■■□□□ 1.11
KHSRP-209ENST00000597704 CGNL1Q0VF96 1302 aa21.97■■□□□ 1.11
KHSRP-209ENST00000597704 EN1Q05925 392 aaPredicted RBP21.96■■□□□ 1.11
KHSRP-209ENST00000597704 SHANK3Q9BYB0 1731 aa21.95■■□□□ 1.1
KHSRP-209ENST00000597704 RGPD3A6NKT7 1758 aaPredicted RBP21.95■■□□□ 1.1
KHSRP-209ENST00000597704 RGPD4Q7Z3J3 1758 aa21.95■■□□□ 1.1
KHSRP-209ENST00000597704 BCL9O00512 1426 aa21.95■■□□□ 1.1
KHSRP-209ENST00000597704 EXOC5O00471 708 aa21.94■■□□□ 1.1
KHSRP-209ENST00000597704 IL2RBP14784 551 aa21.94■■□□□ 1.1
KHSRP-209ENST00000597704 PANK3Q9H999 370 aa21.94■■□□□ 1.1
KHSRP-209ENST00000597704 KIF24Q5T7B8 1368 aa21.94■■□□□ 1.1
KHSRP-209ENST00000597704 NUP188Q5SRE5 1749 aa21.93■■□□□ 1.1
KHSRP-209ENST00000597704 INSRP06213 1382 aa21.92■■□□□ 1.1
KHSRP-209ENST00000597704 FLT4P35916 1363 aa21.92■■□□□ 1.1
KHSRP-209ENST00000597704 KIF7Q2M1P5 1343 aa21.92■■□□□ 1.1
KHSRP-209ENST00000597704 CAMKK2Q96RR4 588 aa21.92■■□□□ 1.1
KHSRP-209ENST00000597704 APBA3O96018 575 aa21.91■■□□□ 1.1
KHSRP-209ENST00000597704 NHSQ6T4R5 1651 aa21.91■■□□□ 1.1
KHSRP-209ENST00000597704 SRCAPQ6ZRS2 3230 aa21.9■■□□□ 1.1
KHSRP-209ENST00000597704 EZH2Q15910 746 aaKnown RBP21.9■■□□□ 1.1
KHSRP-209ENST00000597704 HSP90AB2PQ58FF8 381 aa21.9■■□□□ 1.1
KHSRP-209ENST00000597704 EMILIN1Q9Y6C2 1016 aa21.9■■□□□ 1.1
KHSRP-209ENST00000597704 PARD3Q8TEW0 1356 aa21.88■■□□□ 1.09
KHSRP-209ENST00000597704 SMG6Q86US8 1419 aaKnown RBP21.88■■□□□ 1.09
KHSRP-209ENST00000597704 BTAF1O14981 1849 aa21.87■■□□□ 1.09
KHSRP-209ENST00000597704 NBPF6Q5VWK0 638 aa21.87■■□□□ 1.09
KHSRP-209ENST00000597704 PTF1AQ7RTS3 328 aa21.87■■□□□ 1.09
KHSRP-209ENST00000597704 NBPF4Q96M43 638 aa21.87■■□□□ 1.09
KHSRP-209ENST00000597704 NSD2O96028 1365 aa21.87■■□□□ 1.09
KHSRP-209ENST00000597704 MEGF6O75095 1541 aa21.86■■□□□ 1.09
KHSRP-209ENST00000597704 BCL11BQ9C0K0 894 aaPredicted RBP21.85■■□□□ 1.09
KHSRP-209ENST00000597704 POLKQ9UBT6 870 aa21.85■■□□□ 1.09
KHSRP-209ENST00000597704 WASHC2AQ641Q2 1341 aa21.83■■□□□ 1.09
KHSRP-209ENST00000597704 USHBP1Q8N6Y0 703 aa21.83■■□□□ 1.09
KHSRP-209ENST00000597704 DOT1LQ8TEK3 1739 aa21.83■■□□□ 1.08
KHSRP-209ENST00000597704 NCAPD2Q15021 1401 aa21.82■■□□□ 1.08
KHSRP-209ENST00000597704 PKD1L3Q7Z443 1732 aa21.82■■□□□ 1.08
KHSRP-209ENST00000597704 PPM1GO15355 546 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms