RNA–Protein interactions for RNA: ENST00000597656.5

KHSRP-208, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-208ENST00000597656 USP54Q70EL1 1684 aa11.46□□□□□ -0.57
KHSRP-208ENST00000597656 NFAT5O94916 1531 aa11.46□□□□□ -0.57
KHSRP-208ENST00000597656 BLMP54132 1417 aaPredicted RBP11.46□□□□□ -0.57
KHSRP-208ENST00000597656 GIGYF1O75420 1035 aaPredicted RBP11.46□□□□□ -0.57
KHSRP-208ENST00000597656 CHRNA2Q15822 529 aa11.46□□□□□ -0.57
KHSRP-208ENST00000597656 EP400Q96L91 3159 aa11.45□□□□□ -0.58
KHSRP-208ENST00000597656 NSD2O96028 1365 aa11.45□□□□□ -0.58
KHSRP-208ENST00000597656 BCL9LQ86UU0 1499 aa11.44□□□□□ -0.58
KHSRP-208ENST00000597656 NPC1L1Q9UHC9 1359 aa11.44□□□□□ -0.58
KHSRP-208ENST00000597656 BTG4Q9NY30 223 aa11.44□□□□□ -0.58
KHSRP-208ENST00000597656 SLIT2O94813 1529 aa11.44□□□□□ -0.58
KHSRP-208ENST00000597656 AATKQ6ZMQ8 1374 aa11.43□□□□□ -0.58
KHSRP-208ENST00000597656 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
KHSRP-208ENST00000597656 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
KHSRP-208ENST00000597656 USP21Q9UK80 565 aa11.43□□□□□ -0.58
KHSRP-208ENST00000597656 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
KHSRP-208ENST00000597656 MAP3K19Q56UN5 1328 aa11.42□□□□□ -0.58
KHSRP-208ENST00000597656 ZBTB7CA1YPR0 619 aa11.42□□□□□ -0.58
KHSRP-208ENST00000597656 TNNT2P45379 298 aaPredicted RBP11.42□□□□□ -0.58
KHSRP-208ENST00000597656 RRS1Q15050 365 aaKnown RBP11.42□□□□□ -0.58
KHSRP-208ENST00000597656 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
KHSRP-208ENST00000597656 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
KHSRP-208ENST00000597656 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
KHSRP-208ENST00000597656 IP6K1Q92551 441 aa11.41□□□□□ -0.58
KHSRP-208ENST00000597656 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
KHSRP-208ENST00000597656 CNGB1Q14028 1251 aaPredicted RBP11.4□□□□□ -0.58
KHSRP-208ENST00000597656 POLKQ9UBT6 870 aa11.4□□□□□ -0.58
KHSRP-208ENST00000597656 EMILIN1Q9Y6C2 1016 aa11.4□□□□□ -0.58
KHSRP-208ENST00000597656 LMO7Q8WWI1 1683 aa11.4□□□□□ -0.59
KHSRP-208ENST00000597656 HOXC9P31274 260 aa11.39□□□□□ -0.59
KHSRP-208ENST00000597656 AMPHP49418 695 aa11.39□□□□□ -0.59
KHSRP-208ENST00000597656 COL18A1P39060 1754 aa11.39□□□□□ -0.59
KHSRP-208ENST00000597656 ATRNO75882 1429 aa11.38□□□□□ -0.59
KHSRP-208ENST00000597656 EVA1CP58658 441 aa11.38□□□□□ -0.59
KHSRP-208ENST00000597656 VPS72Q15906 364 aa11.38□□□□□ -0.59
KHSRP-208ENST00000597656 STRN4Q9NRL3 753 aa11.38□□□□□ -0.59
KHSRP-208ENST00000597656 PPP1R1BQ9UD71 204 aaPredicted RBP11.38□□□□□ -0.59
KHSRP-208ENST00000597656 TRPC5Q9UL62 973 aaPredicted RBP11.38□□□□□ -0.59
KHSRP-208ENST00000597656 KIF24Q5T7B8 1368 aa11.38□□□□□ -0.59
KHSRP-208ENST00000597656 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
KHSRP-208ENST00000597656 ANKRD26Q9UPS8 1709 aa11.38□□□□□ -0.59
KHSRP-208ENST00000597656 PLCH1Q4KWH8 1693 aa11.37□□□□□ -0.59
KHSRP-208ENST00000597656 ABCC6O95255 1503 aa11.37□□□□□ -0.59
KHSRP-208ENST00000597656 PPM1GO15355 546 aaPredicted RBP11.37□□□□□ -0.59
KHSRP-208ENST00000597656 R3HDM1Q15032 1099 aaKnown RBP11.37□□□□□ -0.59
KHSRP-208ENST00000597656 HSP90AB2PQ58FF8 381 aa11.37□□□□□ -0.59
KHSRP-208ENST00000597656 LARP1Q6PKG0 1096 aaKnown RBP11.37□□□□□ -0.59
KHSRP-208ENST00000597656 GJD4Q96KN9 370 aaPredicted RBP11.37□□□□□ -0.59
KHSRP-208ENST00000597656 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
KHSRP-208ENST00000597656 PIAS4Q8N2W9 510 aaPredicted RBP11.36□□□□□ -0.59
KHSRP-208ENST00000597656 RTL1A6NKG5 1358 aa11.36□□□□□ -0.59
KHSRP-208ENST00000597656 FLT4P35916 1363 aa11.36□□□□□ -0.59
KHSRP-208ENST00000597656 ERBB3P21860 1342 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 NRAPQ86VF7 1730 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 MTHFSP49914 203 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 TNS4Q8IZW8 715 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 CCDC9Q9Y3X0 531 aaKnown RBP11.35□□□□□ -0.59
KHSRP-208ENST00000597656 INSRP06213 1382 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 PARD3Q8TEW0 1356 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 PEAK1Q9H792 1746 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
KHSRP-208ENST00000597656 SPATA31A1Q5TZJ5 1347 aa11.35□□□□□ -0.59
KHSRP-208ENST00000597656 LTN1O94822 1766 aa11.34□□□□□ -0.59
KHSRP-208ENST00000597656 PPP2R1AP30153 589 aa11.34□□□□□ -0.59
KHSRP-208ENST00000597656 LTV1Q96GA3 475 aaPredicted RBP11.34□□□□□ -0.59
KHSRP-208ENST00000597656 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.34□□□□□ -0.59
KHSRP-208ENST00000597656 CRB1P82279 1406 aa11.34□□□□□ -0.59
KHSRP-208ENST00000597656 CHD4Q14839 1912 aa11.33□□□□□ -0.6
KHSRP-208ENST00000597656 ONECUT3O60422 494 aaPredicted RBP11.33□□□□□ -0.6
KHSRP-208ENST00000597656 CSB-PGBD3P0DP91 1061 aa11.33□□□□□ -0.6
KHSRP-208ENST00000597656 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
KHSRP-208ENST00000597656 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
KHSRP-208ENST00000597656 USP35Q9P2H5 1018 aa11.33□□□□□ -0.6
KHSRP-208ENST00000597656 BAG6P46379 1132 aa11.32□□□□□ -0.6
KHSRP-208ENST00000597656 EIF4A2Q14240 407 aaKnown RBP11.32□□□□□ -0.6
KHSRP-208ENST00000597656 RALBP1Q15311 655 aa11.32□□□□□ -0.6
KHSRP-208ENST00000597656 COL13A1Q5TAT6 717 aaPredicted RBP11.32□□□□□ -0.6
KHSRP-208ENST00000597656 NLRP2Q9NX02 1062 aa11.32□□□□□ -0.6
KHSRP-208ENST00000597656 GLI3P10071 1580 aa11.32□□□□□ -0.6
KHSRP-208ENST00000597656 FAM98CQ17RN3 349 aaKnown RBP11.31□□□□□ -0.6
KHSRP-208ENST00000597656 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
KHSRP-208ENST00000597656 TCP11L2Q8N4U5 519 aa11.31□□□□□ -0.6
KHSRP-208ENST00000597656 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
KHSRP-208ENST00000597656 PRKRIP1Q9H875 184 aaPredicted RBP11.31□□□□□ -0.6
KHSRP-208ENST00000597656 THRAP3Q9Y2W1 955 aaKnown RBP11.31□□□□□ -0.6
KHSRP-208ENST00000597656 RGPD5Q99666 1765 aa11.31□□□□□ -0.6
KHSRP-208ENST00000597656 BARGINQ6ZT62 677 aa11.3□□□□□ -0.6
KHSRP-208ENST00000597656 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
KHSRP-208ENST00000597656 IL13P35225 146 aa11.29□□□□□ -0.6
KHSRP-208ENST00000597656 EYA1Q99502 592 aa11.29□□□□□ -0.6
KHSRP-208ENST00000597656 SEPT12Q8IYM1 358 aa11.28□□□□□ -0.6
KHSRP-208ENST00000597656 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
KHSRP-208ENST00000597656 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.6
KHSRP-208ENST00000597656 DIAPH1O60610 1272 aaKnown RBP11.27□□□□□ -0.61
KHSRP-208ENST00000597656 MYBBP1AQ9BQG0 1328 aaKnown RBP11.27□□□□□ -0.61
KHSRP-208ENST00000597656 DISP2A7MBM2 1401 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms