RNA–Protein interactions for RNA: ENST00000596828.1

LINC01440-203, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5 BASIC

Gene LINC01440, Length 1,005 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-203ENST00000596828 EP400Q96L91 3159 aa13.96□□□□□ -0.17
LINC01440-203ENST00000596828 TTC21BQ7Z4L5 1316 aa13.95□□□□□ -0.18
LINC01440-203ENST00000596828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC01440-203ENST00000596828 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
LINC01440-203ENST00000596828 SSH2Q76I76 1423 aa13.95□□□□□ -0.18
LINC01440-203ENST00000596828 BRD4O60885 1362 aaPredicted RBP13.95□□□□□ -0.18
LINC01440-203ENST00000596828 LMO7Q8WWI1 1683 aa13.95□□□□□ -0.18
LINC01440-203ENST00000596828 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
LINC01440-203ENST00000596828 SPATA31A5Q5VU36 1347 aa13.93□□□□□ -0.18
LINC01440-203ENST00000596828 SPATA31A7Q8IWB4 1347 aa13.93□□□□□ -0.18
LINC01440-203ENST00000596828 CPSF1Q10570 1443 aaKnown RBP13.93□□□□□ -0.18
LINC01440-203ENST00000596828 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
LINC01440-203ENST00000596828 SLIT3O75094 1523 aa13.93□□□□□ -0.18
LINC01440-203ENST00000596828 USP47Q96K76 1375 aa13.93□□□□□ -0.18
LINC01440-203ENST00000596828 LTN1O94822 1766 aa13.92□□□□□ -0.18
LINC01440-203ENST00000596828 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
LINC01440-203ENST00000596828 FAM182BQ5T319 152 aa13.92□□□□□ -0.18
LINC01440-203ENST00000596828 KRT27Q7Z3Y8 459 aa13.92□□□□□ -0.18
LINC01440-203ENST00000596828 HDGFL2Q7Z4V5 671 aaPredicted RBP13.92□□□□□ -0.18
LINC01440-203ENST00000596828 TESK2Q96S53 571 aa13.92□□□□□ -0.18
LINC01440-203ENST00000596828 CD163L1Q9NR16 1453 aa13.92□□□□□ -0.18
LINC01440-203ENST00000596828 COL18A1P39060 1754 aa13.91□□□□□ -0.18
LINC01440-203ENST00000596828 ONECUT3O60422 494 aaPredicted RBP13.91□□□□□ -0.18
LINC01440-203ENST00000596828 LARP1Q6PKG0 1096 aaKnown RBP13.91□□□□□ -0.18
LINC01440-203ENST00000596828 CPDO75976 1380 aa13.91□□□□□ -0.18
LINC01440-203ENST00000596828 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
LINC01440-203ENST00000596828 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.18
LINC01440-203ENST00000596828 TTC21AQ8NDW8 1320 aa13.9□□□□□ -0.18
LINC01440-203ENST00000596828 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
LINC01440-203ENST00000596828 NME9Q86XW9 330 aa13.9□□□□□ -0.18
LINC01440-203ENST00000596828 FBXO3Q9UK99 471 aa13.9□□□□□ -0.18
LINC01440-203ENST00000596828 TERF2IPQ9NYB0 399 aa13.89□□□□□ -0.19
LINC01440-203ENST00000596828 COL5A2P05997 1499 aaPredicted RBP13.88□□□□□ -0.19
LINC01440-203ENST00000596828 A0A1W2PP64 1363 aa13.88□□□□□ -0.19
LINC01440-203ENST00000596828 TMF1P82094 1093 aa13.87□□□□□ -0.19
LINC01440-203ENST00000596828 KCNH5Q8NCM2 988 aa13.87□□□□□ -0.19
LINC01440-203ENST00000596828 TIMELESSQ9UNS1 1208 aa13.87□□□□□ -0.19
LINC01440-203ENST00000596828 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
LINC01440-203ENST00000596828 USP54Q70EL1 1684 aa13.87□□□□□ -0.19
LINC01440-203ENST00000596828 NFAT5O94916 1531 aa13.86□□□□□ -0.19
LINC01440-203ENST00000596828 WNK3Q9BYP7 1800 aa13.86□□□□□ -0.19
LINC01440-203ENST00000596828 SF3B2Q13435 895 aaKnown RBP13.86□□□□□ -0.19
LINC01440-203ENST00000596828 AXIN2Q9Y2T1 843 aa13.86□□□□□ -0.19
LINC01440-203ENST00000596828 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
LINC01440-203ENST00000596828 AATKQ6ZMQ8 1374 aa13.85□□□□□ -0.19
LINC01440-203ENST00000596828 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
LINC01440-203ENST00000596828 BLMP54132 1417 aaPredicted RBP13.85□□□□□ -0.19
LINC01440-203ENST00000596828 TOM1L2Q6ZVM7 507 aa13.85□□□□□ -0.19
LINC01440-203ENST00000596828 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
LINC01440-203ENST00000596828 ARHGEF25Q86VW2 580 aa13.85□□□□□ -0.19
LINC01440-203ENST00000596828 CCDC125Q86Z20 511 aa13.85□□□□□ -0.19
LINC01440-203ENST00000596828 PUS7Q96PZ0 661 aaKnown RBP13.85□□□□□ -0.19
LINC01440-203ENST00000596828 CRB1P82279 1406 aa13.84□□□□□ -0.19
LINC01440-203ENST00000596828 CSB-PGBD3P0DP91 1061 aa13.84□□□□□ -0.19
LINC01440-203ENST00000596828 TCP11L2Q8N4U5 519 aa13.84□□□□□ -0.19
LINC01440-203ENST00000596828 POLR3GLQ9BT43 218 aa13.84□□□□□ -0.19
LINC01440-203ENST00000596828 SSUH2Q9Y2M2 353 aa13.84□□□□□ -0.19
LINC01440-203ENST00000596828 MYOM1P52179 1685 aa13.84□□□□□ -0.19
LINC01440-203ENST00000596828 PARP4Q9UKK3 1724 aaKnown RBP13.84□□□□□ -0.19
LINC01440-203ENST00000596828 KIF20BQ96Q89 1820 aa13.83□□□□□ -0.2
LINC01440-203ENST00000596828 USP31Q70CQ4 1352 aa13.83□□□□□ -0.2
LINC01440-203ENST00000596828 TNS1Q9HBL0 1735 aaKnown RBP13.82□□□□□ -0.2
LINC01440-203ENST00000596828 PDE3BQ13370 1112 aa13.82□□□□□ -0.2
LINC01440-203ENST00000596828 BARGINQ6ZT62 677 aa13.82□□□□□ -0.2
LINC01440-203ENST00000596828 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
LINC01440-203ENST00000596828 PROM2Q8N271 834 aa13.81□□□□□ -0.2
LINC01440-203ENST00000596828 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
LINC01440-203ENST00000596828 WDR17Q8IZU2 1322 aa13.81□□□□□ -0.2
LINC01440-203ENST00000596828 LRRC37A3O60309 1634 aa13.8□□□□□ -0.2
LINC01440-203ENST00000596828 THRAP3Q9Y2W1 955 aaKnown RBP13.8□□□□□ -0.2
LINC01440-203ENST00000596828 RGPD2P0DJD1 1756 aa13.8□□□□□ -0.2
LINC01440-203ENST00000596828 ANKRD36BQ8N2N9 1353 aa13.8□□□□□ -0.2
LINC01440-203ENST00000596828 SBF2Q86WG5 1849 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 TRIM37O94972 964 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 FBLN1P23142 703 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 CDCA8Q53HL2 280 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 PIP4P2Q8N4L2 257 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 COG3Q96JB2 828 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 OVOS2A0A0J9YW53 1432 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 OVOS2Q6IE36 1432 aa13.79□□□□□ -0.2
LINC01440-203ENST00000596828 BAG6P46379 1132 aa13.78□□□□□ -0.2
LINC01440-203ENST00000596828 FAM196AQ6ZSG2 479 aa13.78□□□□□ -0.2
LINC01440-203ENST00000596828 HSPA5P11021 654 aaKnown RBP13.77□□□□□ -0.21
LINC01440-203ENST00000596828 EN1Q05925 392 aaPredicted RBP13.77□□□□□ -0.21
LINC01440-203ENST00000596828 KAT6BQ8WYB5 2073 aa13.77□□□□□ -0.21
LINC01440-203ENST00000596828 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.21
LINC01440-203ENST00000596828 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
LINC01440-203ENST00000596828 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.21
LINC01440-203ENST00000596828 ABCC6O95255 1503 aa13.76□□□□□ -0.21
LINC01440-203ENST00000596828 EIF4G2P78344 907 aaKnown RBP eCLIP13.76□□□□□ -0.21
LINC01440-203ENST00000596828 DDB1Q16531 1140 aa13.76□□□□□ -0.21
LINC01440-203ENST00000596828 FYB1O15117 783 aa13.75□□□□□ -0.21
LINC01440-203ENST00000596828 ANKRD24Q8TF21 1146 aa13.75□□□□□ -0.21
LINC01440-203ENST00000596828 CARD10Q9BWT7 1032 aa13.75□□□□□ -0.21
LINC01440-203ENST00000596828 PEAK1Q9H792 1746 aa13.75□□□□□ -0.21
LINC01440-203ENST00000596828 APBA3O96018 575 aa13.74□□□□□ -0.21
LINC01440-203ENST00000596828 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
LINC01440-203ENST00000596828 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
LINC01440-203ENST00000596828 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
LINC01440-203ENST00000596828 FAM208AQ9UK61 1670 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms