RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 CSB-PGBD3P0DP91 1061 aa15.09■□□□□ 0.01
CHMP2A-202ENST00000596708 KCNH5Q8NCM2 988 aa15.09■□□□□ 0.01
CHMP2A-202ENST00000596708 AXIN2Q9Y2T1 843 aa15.09■□□□□ 0.01
CHMP2A-202ENST00000596708 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
CHMP2A-202ENST00000596708 OVOS2A0A0G2JMS6 1433 aa15.09■□□□□ 0.01
CHMP2A-202ENST00000596708 OVOS2A0A0J9YW53 1432 aa15.09■□□□□ 0.01
CHMP2A-202ENST00000596708 OVOS2Q6IE36 1432 aa15.09■□□□□ 0.01
CHMP2A-202ENST00000596708 WDR17Q8IZU2 1322 aa15.07■□□□□ 0
CHMP2A-202ENST00000596708 TTC21AQ8NDW8 1320 aa15.07■□□□□ 0
CHMP2A-202ENST00000596708 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
CHMP2A-202ENST00000596708 KTN1Q86UP2 1357 aaKnown RBP15.06■□□□□ 0
CHMP2A-202ENST00000596708 CPSF1Q10570 1443 aaKnown RBP15.06■□□□□ 0
CHMP2A-202ENST00000596708 MON2Q7Z3U7 1717 aa15.06■□□□□ 0
CHMP2A-202ENST00000596708 RGPD3A6NKT7 1758 aaPredicted RBP15.06■□□□□ 0
CHMP2A-202ENST00000596708 RGPD4Q7Z3J3 1758 aa15.06■□□□□ 0
CHMP2A-202ENST00000596708 CDCA7Q9BWT1 371 aaPredicted RBP15.05■□□□□ -0
CHMP2A-202ENST00000596708 LTN1O94822 1766 aa15.04■□□□□ -0
CHMP2A-202ENST00000596708 PLSCR1O15162 318 aa15.04■□□□□ -0
CHMP2A-202ENST00000596708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.04■□□□□ -0
CHMP2A-202ENST00000596708 PPP1R1BQ9UD71 204 aaPredicted RBP15.04■□□□□ -0
CHMP2A-202ENST00000596708 EXOC5O00471 708 aa15.03■□□□□ -0
CHMP2A-202ENST00000596708 MARCH10Q8NA82 808 aaPredicted RBP15.03■□□□□ -0
CHMP2A-202ENST00000596708 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
CHMP2A-202ENST00000596708 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
CHMP2A-202ENST00000596708 SPON1Q9HCB6 807 aa15.03■□□□□ -0
CHMP2A-202ENST00000596708 KCNQ2O43526 872 aa15.02■□□□□ -0
CHMP2A-202ENST00000596708 TMC1Q8TDI8 760 aa15.02■□□□□ -0
CHMP2A-202ENST00000596708 CARD11Q9BXL7 1154 aa15.02■□□□□ -0
CHMP2A-202ENST00000596708 PTF1AQ7RTS3 328 aa15.01□□□□□ -0.01
CHMP2A-202ENST00000596708 NFAT5O94916 1531 aa15.01□□□□□ -0.01
CHMP2A-202ENST00000596708 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
CHMP2A-202ENST00000596708 HDGFL2Q7Z4V5 671 aaPredicted RBP14.99□□□□□ -0.01
CHMP2A-202ENST00000596708 USP54Q70EL1 1684 aa14.98□□□□□ -0.01
CHMP2A-202ENST00000596708 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
CHMP2A-202ENST00000596708 NME9Q86XW9 330 aa14.98□□□□□ -0.01
CHMP2A-202ENST00000596708 ANO8Q9HCE9 1232 aaPredicted RBP14.98□□□□□ -0.01
CHMP2A-202ENST00000596708 NLRP2Q9NX02 1062 aa14.98□□□□□ -0.01
CHMP2A-202ENST00000596708 PROM2Q8N271 834 aa14.97□□□□□ -0.01
CHMP2A-202ENST00000596708 SLC12A5Q9H2X9 1139 aa14.97□□□□□ -0.01
CHMP2A-202ENST00000596708 BCL9O00512 1426 aa14.97□□□□□ -0.01
CHMP2A-202ENST00000596708 USP31Q70CQ4 1352 aa14.97□□□□□ -0.01
CHMP2A-202ENST00000596708 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
CHMP2A-202ENST00000596708 ABCC6O95255 1503 aa14.97□□□□□ -0.01
CHMP2A-202ENST00000596708 CASZ1Q86V15 1759 aa14.96□□□□□ -0.01
CHMP2A-202ENST00000596708 TONSLQ96HA7 1378 aa14.96□□□□□ -0.02
CHMP2A-202ENST00000596708 TXNRD1Q16881 649 aa14.95□□□□□ -0.02
CHMP2A-202ENST00000596708 ACSBG1Q96GR2 724 aa14.95□□□□□ -0.02
CHMP2A-202ENST00000596708 STK32BQ9NY57 414 aa14.95□□□□□ -0.02
CHMP2A-202ENST00000596708 CD163L1Q9NR16 1453 aa14.95□□□□□ -0.02
CHMP2A-202ENST00000596708 ERBB3P21860 1342 aa14.94□□□□□ -0.02
CHMP2A-202ENST00000596708 NHSQ6T4R5 1651 aa14.94□□□□□ -0.02
CHMP2A-202ENST00000596708 TNS2Q63HR2 1409 aa14.94□□□□□ -0.02
CHMP2A-202ENST00000596708 YY1P25490 414 aa14.94□□□□□ -0.02
CHMP2A-202ENST00000596708 TERF2IPQ9NYB0 399 aa14.94□□□□□ -0.02
CHMP2A-202ENST00000596708 BTAF1O14981 1849 aa14.94□□□□□ -0.02
CHMP2A-202ENST00000596708 ZBTB7AO95365 584 aa14.93□□□□□ -0.02
CHMP2A-202ENST00000596708 IL2RBP14784 551 aa14.93□□□□□ -0.02
CHMP2A-202ENST00000596708 ANKRD24Q8TF21 1146 aa14.93□□□□□ -0.02
CHMP2A-202ENST00000596708 PDGFDQ9GZP0 370 aaPredicted RBP14.93□□□□□ -0.02
CHMP2A-202ENST00000596708 SLC15A2Q16348 729 aa14.92□□□□□ -0.02
CHMP2A-202ENST00000596708 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
CHMP2A-202ENST00000596708 NINLQ9Y2I6 1382 aa14.92□□□□□ -0.02
CHMP2A-202ENST00000596708 EDC4Q6P2E9 1401 aaKnown RBP14.92□□□□□ -0.02
CHMP2A-202ENST00000596708 RGPD2P0DJD1 1756 aa14.91□□□□□ -0.02
CHMP2A-202ENST00000596708 A0A1W2PP64 1363 aa14.91□□□□□ -0.02
CHMP2A-202ENST00000596708 LTV1Q96GA3 475 aaPredicted RBP14.9□□□□□ -0.02
CHMP2A-202ENST00000596708 PUS7Q96PZ0 661 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-202ENST00000596708 MYOM1P52179 1685 aa14.9□□□□□ -0.02
CHMP2A-202ENST00000596708 FAM208AQ9UK61 1670 aaKnown RBP14.9□□□□□ -0.02
CHMP2A-202ENST00000596708 CHD4Q14839 1912 aa14.88□□□□□ -0.03
CHMP2A-202ENST00000596708 IP6K1Q92551 441 aa14.88□□□□□ -0.03
CHMP2A-202ENST00000596708 ST20-MTHFSA0A0A6YYL1 179 aa14.87□□□□□ -0.03
CHMP2A-202ENST00000596708 DDX54Q8TDD1 881 aaKnown RBP14.87□□□□□ -0.03
CHMP2A-202ENST00000596708 COG3Q96JB2 828 aa14.87□□□□□ -0.03
CHMP2A-202ENST00000596708 PTGER2P43116 358 aa14.86□□□□□ -0.03
CHMP2A-202ENST00000596708 MTFR1LQ9H019 292 aa14.86□□□□□ -0.03
CHMP2A-202ENST00000596708 SLC24A1O60721 1099 aa14.85□□□□□ -0.03
CHMP2A-202ENST00000596708 AMPHP49418 695 aa14.85□□□□□ -0.03
CHMP2A-202ENST00000596708 FBLN1P23142 703 aa14.84□□□□□ -0.03
CHMP2A-202ENST00000596708 TESK2Q96S53 571 aa14.84□□□□□ -0.03
CHMP2A-202ENST00000596708 SYT17Q9BSW7 474 aa14.83□□□□□ -0.04
CHMP2A-202ENST00000596708 FHDC1Q9C0D6 1143 aaPredicted RBP14.83□□□□□ -0.04
CHMP2A-202ENST00000596708 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.04
CHMP2A-202ENST00000596708 PAPPAQ13219 1627 aa14.82□□□□□ -0.04
CHMP2A-202ENST00000596708 HOXC9P31274 260 aa14.82□□□□□ -0.04
CHMP2A-202ENST00000596708 SYTL4Q96C24 671 aaPredicted RBP14.82□□□□□ -0.04
CHMP2A-202ENST00000596708 MAP3K19Q56UN5 1328 aa14.82□□□□□ -0.04
CHMP2A-202ENST00000596708 QSER1Q2KHR3 1735 aa14.81□□□□□ -0.04
CHMP2A-202ENST00000596708 LRRC4BQ9NT99 713 aa14.81□□□□□ -0.04
CHMP2A-202ENST00000596708 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
CHMP2A-202ENST00000596708 KIF20BQ96Q89 1820 aa14.8□□□□□ -0.04
CHMP2A-202ENST00000596708 TUBGCP6Q96RT7 1819 aa14.8□□□□□ -0.04
CHMP2A-202ENST00000596708 ZNF827Q17R98 1081 aa14.8□□□□□ -0.04
CHMP2A-202ENST00000596708 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
CHMP2A-202ENST00000596708 ARXQ96QS3 562 aa14.8□□□□□ -0.04
CHMP2A-202ENST00000596708 LY75O60449 1722 aa14.8□□□□□ -0.04
CHMP2A-202ENST00000596708 PRIM1P49642 420 aaKnown RBP14.79□□□□□ -0.04
CHMP2A-202ENST00000596708 TMF1P82094 1093 aa14.79□□□□□ -0.04
CHMP2A-202ENST00000596708 RRS1Q15050 365 aaKnown RBP14.79□□□□□ -0.04
CHMP2A-202ENST00000596708 SLC27A3Q5K4L6 730 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms