RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 USP35Q9P2H5 1018 aa26.68■■□□□ 1.86
HOMER3-209ENST00000596482 COL18A1P39060 1754 aa26.68■■□□□ 1.86
HOMER3-209ENST00000596482 CRB1P82279 1406 aa26.66■■□□□ 1.86
HOMER3-209ENST00000596482 KRT27Q7Z3Y8 459 aa26.66■■□□□ 1.86
HOMER3-209ENST00000596482 COG3Q96JB2 828 aa26.65■■□□□ 1.86
HOMER3-209ENST00000596482 POLR3GLQ9BT43 218 aa26.65■■□□□ 1.86
HOMER3-209ENST00000596482 LTN1O94822 1766 aa26.63■■□□□ 1.85
HOMER3-209ENST00000596482 TCP11L2Q8N4U5 519 aa26.63■■□□□ 1.85
HOMER3-209ENST00000596482 BARGINQ6ZT62 677 aa26.62■■□□□ 1.85
HOMER3-209ENST00000596482 THRAP3Q9Y2W1 955 aaKnown RBP26.62■■□□□ 1.85
HOMER3-209ENST00000596482 KIF20BQ96Q89 1820 aa26.62■■□□□ 1.85
HOMER3-209ENST00000596482 TOM1L2Q6ZVM7 507 aa26.61■■□□□ 1.85
HOMER3-209ENST00000596482 WDR17Q8IZU2 1322 aa26.61■■□□□ 1.85
HOMER3-209ENST00000596482 NSD3Q9BZ95 1437 aa26.6■■□□□ 1.85
HOMER3-209ENST00000596482 CSB-PGBD3P0DP91 1061 aa26.6■■□□□ 1.85
HOMER3-209ENST00000596482 AXIN2Q9Y2T1 843 aa26.6■■□□□ 1.85
HOMER3-209ENST00000596482 RGPD5Q99666 1765 aa26.58■■□□□ 1.85
HOMER3-209ENST00000596482 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
HOMER3-209ENST00000596482 CCDC125Q86Z20 511 aa26.57■■□□□ 1.84
HOMER3-209ENST00000596482 GGNBP2Q9H3C7 697 aa26.55■■□□□ 1.84
HOMER3-209ENST00000596482 PARP4Q9UKK3 1724 aaKnown RBP26.55■■□□□ 1.84
HOMER3-209ENST00000596482 WNK3Q9BYP7 1800 aa26.54■■□□□ 1.84
HOMER3-209ENST00000596482 FYB1O15117 783 aa26.54■■□□□ 1.84
HOMER3-209ENST00000596482 ERBB3P21860 1342 aa26.53■■□□□ 1.84
HOMER3-209ENST00000596482 SF3B2Q13435 895 aaKnown RBP26.52■■□□□ 1.84
HOMER3-209ENST00000596482 CCDC7Q96M83 1385 aa26.51■■□□□ 1.83
HOMER3-209ENST00000596482 PDE3BQ13370 1112 aa26.51■■□□□ 1.83
HOMER3-209ENST00000596482 CARD14Q9BXL6 1004 aa26.51■■□□□ 1.83
HOMER3-209ENST00000596482 EP400Q96L91 3159 aa26.51■■□□□ 1.83
HOMER3-209ENST00000596482 LRRC37A3O60309 1634 aa26.5■■□□□ 1.83
HOMER3-209ENST00000596482 CARD10Q9BWT7 1032 aa26.5■■□□□ 1.83
HOMER3-209ENST00000596482 RTL1A6NKG5 1358 aa26.49■■□□□ 1.83
HOMER3-209ENST00000596482 CGNL1Q0VF96 1302 aa26.49■■□□□ 1.83
HOMER3-209ENST00000596482 MAP3K19Q56UN5 1328 aa26.49■■□□□ 1.83
HOMER3-209ENST00000596482 AMPHP49418 695 aa26.48■■□□□ 1.83
HOMER3-209ENST00000596482 FAM182BQ5T319 152 aa26.48■■□□□ 1.83
HOMER3-209ENST00000596482 ANKRD24Q8TF21 1146 aa26.48■■□□□ 1.83
HOMER3-209ENST00000596482 CDCA7Q9BWT1 371 aaPredicted RBP26.48■■□□□ 1.83
HOMER3-209ENST00000596482 RGPD1P0DJD0 1748 aa26.48■■□□□ 1.83
HOMER3-209ENST00000596482 FAM208AQ9UK61 1670 aaKnown RBP26.47■■□□□ 1.83
HOMER3-209ENST00000596482 IP6K1Q92551 441 aa26.47■■□□□ 1.83
HOMER3-209ENST00000596482 NLRP2Q9NX02 1062 aa26.46■■□□□ 1.83
HOMER3-209ENST00000596482 FAM196AQ6ZSG2 479 aa26.45■■□□□ 1.82
HOMER3-209ENST00000596482 HOXC9P31274 260 aa26.44■■□□□ 1.82
HOMER3-209ENST00000596482 DDB1Q16531 1140 aa26.44■■□□□ 1.82
HOMER3-209ENST00000596482 DISP2A7MBM2 1401 aa26.44■■□□□ 1.82
HOMER3-209ENST00000596482 RRS1Q15050 365 aaKnown RBP26.43■■□□□ 1.82
HOMER3-209ENST00000596482 C11orf95C9JLR9 678 aaPredicted RBP26.42■■□□□ 1.82
HOMER3-209ENST00000596482 FBLN1P23142 703 aa26.42■■□□□ 1.82
HOMER3-209ENST00000596482 ANKRD26Q9UPS8 1709 aa26.42■■□□□ 1.82
HOMER3-209ENST00000596482 KIF7Q2M1P5 1343 aa26.41■■□□□ 1.82
HOMER3-209ENST00000596482 OVOS2A0A0G2JMS6 1433 aa26.41■■□□□ 1.82
HOMER3-209ENST00000596482 SMG6Q86US8 1419 aaKnown RBP26.41■■□□□ 1.82
HOMER3-209ENST00000596482 LTV1Q96GA3 475 aaPredicted RBP26.41■■□□□ 1.82
HOMER3-209ENST00000596482 PANK3Q9H999 370 aa26.41■■□□□ 1.82
HOMER3-209ENST00000596482 TNS1Q9HBL0 1735 aaKnown RBP26.4■■□□□ 1.82
HOMER3-209ENST00000596482 BAG6P46379 1132 aa26.4■■□□□ 1.82
HOMER3-209ENST00000596482 TNS2Q63HR2 1409 aa26.39■■□□□ 1.82
HOMER3-209ENST00000596482 FLT4P35916 1363 aa26.39■■□□□ 1.82
HOMER3-209ENST00000596482 KIF24Q5T7B8 1368 aa26.39■■□□□ 1.82
HOMER3-209ENST00000596482 NSD2O96028 1365 aa26.37■■□□□ 1.81
HOMER3-209ENST00000596482 DEFB132Q7Z7B7 95 aa26.37■■□□□ 1.81
HOMER3-209ENST00000596482 PEAK1Q9H792 1746 aa26.36■■□□□ 1.81
HOMER3-209ENST00000596482 IL2RBP14784 551 aa26.35■■□□□ 1.81
HOMER3-209ENST00000596482 TRIM37O94972 964 aa26.34■■□□□ 1.81
HOMER3-209ENST00000596482 EXOC5O00471 708 aa26.33■■□□□ 1.81
HOMER3-209ENST00000596482 INSRP06213 1382 aa26.33■■□□□ 1.8
HOMER3-209ENST00000596482 EMILIN1Q9Y6C2 1016 aa26.32■■□□□ 1.8
HOMER3-209ENST00000596482 KNSTRNQ9Y448 316 aa26.31■■□□□ 1.8
HOMER3-209ENST00000596482 PPM1GO15355 546 aaPredicted RBP26.29■■□□□ 1.8
HOMER3-209ENST00000596482 HSP90AB2PQ58FF8 381 aa26.28■■□□□ 1.8
HOMER3-209ENST00000596482 MARCH10Q8NA82 808 aaPredicted RBP26.28■■□□□ 1.8
HOMER3-209ENST00000596482 BCL9O00512 1426 aa26.28■■□□□ 1.8
HOMER3-209ENST00000596482 RGPD2P0DJD1 1756 aa26.28■■□□□ 1.8
HOMER3-209ENST00000596482 TNNT2P45379 298 aaPredicted RBP26.27■■□□□ 1.8
HOMER3-209ENST00000596482 APBA3O96018 575 aa26.26■■□□□ 1.79
HOMER3-209ENST00000596482 EN1Q05925 392 aaPredicted RBP26.26■■□□□ 1.79
HOMER3-209ENST00000596482 PARD3Q8TEW0 1356 aa26.25■■□□□ 1.79
HOMER3-209ENST00000596482 MAP2P11137 1827 aaKnown RBP26.24■■□□□ 1.79
HOMER3-209ENST00000596482 MORC1Q86VD1 984 aa26.24■■□□□ 1.79
HOMER3-209ENST00000596482 MEGF6O75095 1541 aa26.24■■□□□ 1.79
HOMER3-209ENST00000596482 SBF2Q86WG5 1849 aa26.23■■□□□ 1.79
HOMER3-209ENST00000596482 WASHC2AQ641Q2 1341 aa26.23■■□□□ 1.79
HOMER3-209ENST00000596482 NBPF6Q5VWK0 638 aa26.23■■□□□ 1.79
HOMER3-209ENST00000596482 NBPF4Q96M43 638 aa26.23■■□□□ 1.79
HOMER3-209ENST00000596482 USHBP1Q8N6Y0 703 aa26.22■■□□□ 1.79
HOMER3-209ENST00000596482 POLKQ9UBT6 870 aa26.22■■□□□ 1.79
HOMER3-209ENST00000596482 RAPGEF4Q8WZA2 1011 aa26.2■■□□□ 1.78
HOMER3-209ENST00000596482 EZH2Q15910 746 aaKnown RBP26.19■■□□□ 1.78
HOMER3-209ENST00000596482 BCL11BQ9C0K0 894 aaPredicted RBP26.19■■□□□ 1.78
HOMER3-209ENST00000596482 NHSQ6T4R5 1651 aa26.19■■□□□ 1.78
HOMER3-209ENST00000596482 RGPD3A6NKT7 1758 aaPredicted RBP26.18■■□□□ 1.78
HOMER3-209ENST00000596482 RGPD4Q7Z3J3 1758 aa26.18■■□□□ 1.78
HOMER3-209ENST00000596482 AMER1Q5JTC6 1135 aaPredicted RBP26.18■■□□□ 1.78
HOMER3-209ENST00000596482 RREB1Q92766 1687 aa26.18■■□□□ 1.78
HOMER3-209ENST00000596482 CAMKK2Q96RR4 588 aa26.17■■□□□ 1.78
HOMER3-209ENST00000596482 TATP17735 454 aaPredicted RBP26.16■■□□□ 1.78
HOMER3-209ENST00000596482 DDX54Q8TDD1 881 aaKnown RBP26.16■■□□□ 1.78
HOMER3-209ENST00000596482 SHANK3Q9BYB0 1731 aa26.15■■□□□ 1.78
HOMER3-209ENST00000596482 ZCRB1Q8TBF4 217 aaKnown RBP26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms