RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 ARHGEF25Q86VW2 580 aa25.26■■□□□ 1.63
PNKP-206ENST00000595792 TMC1Q8TDI8 760 aa25.25■■□□□ 1.63
PNKP-206ENST00000595792 TOM1L2Q6ZVM7 507 aa25.24■■□□□ 1.63
PNKP-206ENST00000595792 TESK2Q96S53 571 aa25.24■■□□□ 1.63
PNKP-206ENST00000595792 PEAK1Q9H792 1746 aa25.23■■□□□ 1.63
PNKP-206ENST00000595792 USP54Q70EL1 1684 aa25.23■■□□□ 1.63
PNKP-206ENST00000595792 WDR17Q8IZU2 1322 aa25.23■■□□□ 1.63
PNKP-206ENST00000595792 APBA3O96018 575 aa25.23■■□□□ 1.63
PNKP-206ENST00000595792 NME9Q86XW9 330 aa25.23■■□□□ 1.63
PNKP-206ENST00000595792 KCNH5Q8NCM2 988 aa25.23■■□□□ 1.63
PNKP-206ENST00000595792 SLC12A5Q9H2X9 1139 aa25.23■■□□□ 1.63
PNKP-206ENST00000595792 RREB1Q92766 1687 aa25.22■■□□□ 1.63
PNKP-206ENST00000595792 LRP5O75197 1615 aa25.22■■□□□ 1.63
PNKP-206ENST00000595792 ST20-MTHFSA0A0A6YYL1 179 aa25.21■■□□□ 1.63
PNKP-206ENST00000595792 CAMKK2Q96RR4 588 aa25.21■■□□□ 1.63
PNKP-206ENST00000595792 R3HDM1Q15032 1099 aaKnown RBP25.2■■□□□ 1.62
PNKP-206ENST00000595792 NUP188Q5SRE5 1749 aa25.2■■□□□ 1.62
PNKP-206ENST00000595792 A0A1W2PP64 1363 aa25.19■■□□□ 1.62
PNKP-206ENST00000595792 USP31Q70CQ4 1352 aa25.18■■□□□ 1.62
PNKP-206ENST00000595792 LTN1O94822 1766 aa25.18■■□□□ 1.62
PNKP-206ENST00000595792 CSB-PGBD3P0DP91 1061 aa25.17■■□□□ 1.62
PNKP-206ENST00000595792 HDGFL2Q7Z4V5 671 aaPredicted RBP25.17■■□□□ 1.62
PNKP-206ENST00000595792 OVOS2A0A0G2JMS6 1433 aa25.17■■□□□ 1.62
PNKP-206ENST00000595792 OVOS2A0A0J9YW53 1432 aa25.17■■□□□ 1.62
PNKP-206ENST00000595792 OVOS2Q6IE36 1432 aa25.17■■□□□ 1.62
PNKP-206ENST00000595792 EDC4Q6P2E9 1401 aaKnown RBP25.17■■□□□ 1.62
PNKP-206ENST00000595792 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
PNKP-206ENST00000595792 CLSPNQ9HAW4 1339 aa25.15■■□□□ 1.62
PNKP-206ENST00000595792 DDB1Q16531 1140 aa25.15■■□□□ 1.62
PNKP-206ENST00000595792 ABCC6O95255 1503 aa25.15■■□□□ 1.62
PNKP-206ENST00000595792 USP47Q96K76 1375 aa25.14■■□□□ 1.61
PNKP-206ENST00000595792 CARD10Q9BWT7 1032 aa25.13■■□□□ 1.61
PNKP-206ENST00000595792 PARD3Q8TEW0 1356 aa25.13■■□□□ 1.61
PNKP-206ENST00000595792 PUS7Q96PZ0 661 aaKnown RBP25.12■■□□□ 1.61
PNKP-206ENST00000595792 PTF1AQ7RTS3 328 aa25.11■■□□□ 1.61
PNKP-206ENST00000595792 TERF2IPQ9NYB0 399 aa25.11■■□□□ 1.61
PNKP-206ENST00000595792 MARCH10Q8NA82 808 aaPredicted RBP25.1■■□□□ 1.61
PNKP-206ENST00000595792 TIMELESSQ9UNS1 1208 aa25.09■■□□□ 1.61
PNKP-206ENST00000595792 ERBB3P21860 1342 aa25.08■■□□□ 1.6
PNKP-206ENST00000595792 CCDC7Q96M83 1385 aa25.06■■□□□ 1.6
PNKP-206ENST00000595792 TNS2Q63HR2 1409 aa25.06■■□□□ 1.6
PNKP-206ENST00000595792 CDCA7Q9BWT1 371 aaPredicted RBP25.06■■□□□ 1.6
PNKP-206ENST00000595792 MYOM1P52179 1685 aa25.06■■□□□ 1.6
PNKP-206ENST00000595792 RGPD3A6NKT7 1758 aaPredicted RBP25.05■■□□□ 1.6
PNKP-206ENST00000595792 RGPD4Q7Z3J3 1758 aa25.05■■□□□ 1.6
PNKP-206ENST00000595792 NINLQ9Y2I6 1382 aa25.05■■□□□ 1.6
PNKP-206ENST00000595792 NLRP2Q9NX02 1062 aa25.04■■□□□ 1.6
PNKP-206ENST00000595792 ANKRD24Q8TF21 1146 aa25.03■■□□□ 1.6
PNKP-206ENST00000595792 C11orf95C9JLR9 678 aaPredicted RBP25.02■■□□□ 1.6
PNKP-206ENST00000595792 EXOC5O00471 708 aa25■■□□□ 1.59
PNKP-206ENST00000595792 FBLN1P23142 703 aa25■■□□□ 1.59
PNKP-206ENST00000595792 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
PNKP-206ENST00000595792 BCL11BQ9C0K0 894 aaPredicted RBP25■■□□□ 1.59
PNKP-206ENST00000595792 ANKRD36BQ8N2N9 1353 aa25■■□□□ 1.59
PNKP-206ENST00000595792 BCL9O00512 1426 aa25■■□□□ 1.59
PNKP-206ENST00000595792 TMF1P82094 1093 aa24.98■■□□□ 1.59
PNKP-206ENST00000595792 NBPF14Q5TI25 921 aa24.98■■□□□ 1.59
PNKP-206ENST00000595792 NHSQ6T4R5 1651 aa24.97■■□□□ 1.59
PNKP-206ENST00000595792 LTV1Q96GA3 475 aaPredicted RBP24.97■■□□□ 1.59
PNKP-206ENST00000595792 COG3Q96JB2 828 aa24.97■■□□□ 1.59
PNKP-206ENST00000595792 ANO8Q9HCE9 1232 aaPredicted RBP24.97■■□□□ 1.59
PNKP-206ENST00000595792 KIF20BQ96Q89 1820 aa24.97■■□□□ 1.59
PNKP-206ENST00000595792 MAP3K19Q56UN5 1328 aa24.96■■□□□ 1.59
PNKP-206ENST00000595792 PLSCR1O15162 318 aa24.96■■□□□ 1.59
PNKP-206ENST00000595792 SLC24A1O60721 1099 aa24.96■■□□□ 1.59
PNKP-206ENST00000595792 FAM208AQ9UK61 1670 aaKnown RBP24.95■■□□□ 1.58
PNKP-206ENST00000595792 KCNQ2O43526 872 aa24.95■■□□□ 1.58
PNKP-206ENST00000595792 IL2RBP14784 551 aa24.95■■□□□ 1.58
PNKP-206ENST00000595792 IP6K1Q92551 441 aa24.95■■□□□ 1.58
PNKP-206ENST00000595792 RGPD2P0DJD1 1756 aa24.95■■□□□ 1.58
PNKP-206ENST00000595792 PROM2Q8N271 834 aa24.94■■□□□ 1.58
PNKP-206ENST00000595792 ACSBG1Q96GR2 724 aa24.94■■□□□ 1.58
PNKP-206ENST00000595792 GGNBP2Q9H3C7 697 aa24.92■■□□□ 1.58
PNKP-206ENST00000595792 HOXC9P31274 260 aa24.91■■□□□ 1.58
PNKP-206ENST00000595792 CASZ1Q86V15 1759 aa24.9■■□□□ 1.58
PNKP-206ENST00000595792 FYB1O15117 783 aa24.89■■□□□ 1.58
PNKP-206ENST00000595792 RRS1Q15050 365 aaKnown RBP24.89■■□□□ 1.58
PNKP-206ENST00000595792 BTAF1O14981 1849 aa24.89■■□□□ 1.57
PNKP-206ENST00000595792 AMPHP49418 695 aa24.88■■□□□ 1.57
PNKP-206ENST00000595792 TXNRD1Q16881 649 aa24.87■■□□□ 1.57
PNKP-206ENST00000595792 PDGFDQ9GZP0 370 aaPredicted RBP24.87■■□□□ 1.57
PNKP-206ENST00000595792 CARD14Q9BXL6 1004 aa24.86■■□□□ 1.57
PNKP-206ENST00000595792 SHANK3Q9BYB0 1731 aa24.86■■□□□ 1.57
PNKP-206ENST00000595792 MEGF6O75095 1541 aa24.84■■□□□ 1.57
PNKP-206ENST00000595792 RTL1A6NKG5 1358 aa24.83■■□□□ 1.57
PNKP-206ENST00000595792 HSPA5P11021 654 aaKnown RBP24.83■■□□□ 1.57
PNKP-206ENST00000595792 CDCA8Q53HL2 280 aa24.83■■□□□ 1.57
PNKP-206ENST00000595792 DDX54Q8TDD1 881 aaKnown RBP24.83■■□□□ 1.57
PNKP-206ENST00000595792 NSD3Q9BZ95 1437 aa24.83■■□□□ 1.57
PNKP-206ENST00000595792 DOT1LQ8TEK3 1739 aa24.82■■□□□ 1.56
PNKP-206ENST00000595792 SPON1Q9HCB6 807 aa24.82■■□□□ 1.56
PNKP-206ENST00000595792 PAPPAQ13219 1627 aa24.82■■□□□ 1.56
PNKP-206ENST00000595792 USHBP1Q8N6Y0 703 aa24.81■■□□□ 1.56
PNKP-206ENST00000595792 MAP2P11137 1827 aaKnown RBP24.79■■□□□ 1.56
PNKP-206ENST00000595792 KAT6BQ8WYB5 2073 aa24.79■■□□□ 1.56
PNKP-206ENST00000595792 ZBTB7AO95365 584 aa24.78■■□□□ 1.56
PNKP-206ENST00000595792 EIF4G2P78344 907 aaKnown RBP eCLIP24.78■■□□□ 1.56
PNKP-206ENST00000595792 NBPF6Q5VWK0 638 aa24.78■■□□□ 1.56
PNKP-206ENST00000595792 NBPF4Q96M43 638 aa24.78■■□□□ 1.56
PNKP-206ENST00000595792 STK32BQ9NY57 414 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms