RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 GJD4Q96KN9 370 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-207ENST00000595631 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-207ENST00000595631 AATKQ6ZMQ8 1374 aa19.04■□□□□ 0.64
SHKBP1-207ENST00000595631 CDK12Q9NYV4 1490 aaPredicted RBP19.03■□□□□ 0.64
SHKBP1-207ENST00000595631 WNK3Q9BYP7 1800 aa19.02■□□□□ 0.64
SHKBP1-207ENST00000595631 RGPD2P0DJD1 1756 aa19.02■□□□□ 0.64
SHKBP1-207ENST00000595631 AXIN2Q9Y2T1 843 aa19.02■□□□□ 0.64
SHKBP1-207ENST00000595631 PEAK1Q9H792 1746 aa19.02■□□□□ 0.63
SHKBP1-207ENST00000595631 ABCC6O95255 1503 aa19.01■□□□□ 0.63
SHKBP1-207ENST00000595631 EVA1CP58658 441 aa19■□□□□ 0.63
SHKBP1-207ENST00000595631 LARP1Q6PKG0 1096 aaKnown RBP19■□□□□ 0.63
SHKBP1-207ENST00000595631 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
SHKBP1-207ENST00000595631 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
SHKBP1-207ENST00000595631 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
SHKBP1-207ENST00000595631 THSD7AQ9UPZ6 1657 aa18.98■□□□□ 0.63
SHKBP1-207ENST00000595631 ZEB1P37275 1124 aaPredicted RBP18.98■□□□□ 0.63
SHKBP1-207ENST00000595631 RRS1Q15050 365 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-207ENST00000595631 MAP3K19Q56UN5 1328 aa18.97■□□□□ 0.63
SHKBP1-207ENST00000595631 SPATA31A1Q5TZJ5 1347 aa18.97■□□□□ 0.63
SHKBP1-207ENST00000595631 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-207ENST00000595631 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
SHKBP1-207ENST00000595631 FAM208AQ9UK61 1670 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-207ENST00000595631 CRB1P82279 1406 aa18.94■□□□□ 0.62
SHKBP1-207ENST00000595631 SOCS7O14512 581 aa18.93■□□□□ 0.62
SHKBP1-207ENST00000595631 KNSTRNQ9Y448 316 aa18.93■□□□□ 0.62
SHKBP1-207ENST00000595631 WDR17Q8IZU2 1322 aa18.93■□□□□ 0.62
SHKBP1-207ENST00000595631 PARP4Q9UKK3 1724 aaKnown RBP18.92■□□□□ 0.62
SHKBP1-207ENST00000595631 A0A0G2JS52 829 aa18.92■□□□□ 0.62
SHKBP1-207ENST00000595631 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
SHKBP1-207ENST00000595631 MYT1Q01538 1121 aa18.92■□□□□ 0.62
SHKBP1-207ENST00000595631 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
SHKBP1-207ENST00000595631 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
SHKBP1-207ENST00000595631 BLMP54132 1417 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-207ENST00000595631 PER1O15534 1290 aaPredicted RBP18.91■□□□□ 0.62
SHKBP1-207ENST00000595631 CSB-PGBD3P0DP91 1061 aa18.91■□□□□ 0.62
SHKBP1-207ENST00000595631 HOXC9P31274 260 aa18.91■□□□□ 0.62
SHKBP1-207ENST00000595631 AMPHP49418 695 aa18.91■□□□□ 0.62
SHKBP1-207ENST00000595631 IP6K1Q92551 441 aa18.91■□□□□ 0.62
SHKBP1-207ENST00000595631 NSD2O96028 1365 aa18.91■□□□□ 0.62
SHKBP1-207ENST00000595631 LRRC37A3O60309 1634 aa18.9■□□□□ 0.62
SHKBP1-207ENST00000595631 ONECUT3O60422 494 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-207ENST00000595631 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-207ENST00000595631 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
SHKBP1-207ENST00000595631 EMILIN1Q9Y6C2 1016 aa18.9■□□□□ 0.62
SHKBP1-207ENST00000595631 ERBB3P21860 1342 aa18.9■□□□□ 0.62
SHKBP1-207ENST00000595631 ANKRD24Q8TF21 1146 aa18.89■□□□□ 0.61
SHKBP1-207ENST00000595631 RTL1A6NKG5 1358 aa18.89■□□□□ 0.61
SHKBP1-207ENST00000595631 CNGB1Q14028 1251 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-207ENST00000595631 TCP11L2Q8N4U5 519 aa18.88■□□□□ 0.61
SHKBP1-207ENST00000595631 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-207ENST00000595631 FLT4P35916 1363 aa18.86■□□□□ 0.61
SHKBP1-207ENST00000595631 PPM1GO15355 546 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-207ENST00000595631 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
SHKBP1-207ENST00000595631 BARGINQ6ZT62 677 aa18.86■□□□□ 0.61
SHKBP1-207ENST00000595631 MORC1Q86VD1 984 aa18.86■□□□□ 0.61
SHKBP1-207ENST00000595631 CARD10Q9BWT7 1032 aa18.85■□□□□ 0.61
SHKBP1-207ENST00000595631 NLRP2Q9NX02 1062 aa18.85■□□□□ 0.61
SHKBP1-207ENST00000595631 POLKQ9UBT6 870 aa18.85■□□□□ 0.61
SHKBP1-207ENST00000595631 THRAP3Q9Y2W1 955 aaKnown RBP18.84■□□□□ 0.61
SHKBP1-207ENST00000595631 DISP2A7MBM2 1401 aa18.83■□□□□ 0.61
SHKBP1-207ENST00000595631 INSRP06213 1382 aa18.83■□□□□ 0.61
SHKBP1-207ENST00000595631 FAM182BQ5T319 152 aa18.83■□□□□ 0.6
SHKBP1-207ENST00000595631 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-207ENST00000595631 KIF24Q5T7B8 1368 aa18.82■□□□□ 0.6
SHKBP1-207ENST00000595631 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
SHKBP1-207ENST00000595631 SHANK3Q9BYB0 1731 aa18.81■□□□□ 0.6
SHKBP1-207ENST00000595631 NPC1L1Q9UHC9 1359 aa18.81■□□□□ 0.6
SHKBP1-207ENST00000595631 SBF2Q86WG5 1849 aa18.8■□□□□ 0.6
SHKBP1-207ENST00000595631 USHBP1Q8N6Y0 703 aa18.79■□□□□ 0.6
SHKBP1-207ENST00000595631 UPF1Q92900 1129 aaKnown RBP eCLIP18.79■□□□□ 0.6
SHKBP1-207ENST00000595631 NBPF6Q5VWK0 638 aa18.78■□□□□ 0.6
SHKBP1-207ENST00000595631 NBPF4Q96M43 638 aa18.78■□□□□ 0.6
SHKBP1-207ENST00000595631 TNS1Q9HBL0 1735 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-207ENST00000595631 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-207ENST00000595631 RGPD1P0DJD0 1748 aa18.77■□□□□ 0.59
SHKBP1-207ENST00000595631 MEGF6O75095 1541 aa18.76■□□□□ 0.59
SHKBP1-207ENST00000595631 PDE3BQ13370 1112 aa18.75■□□□□ 0.59
SHKBP1-207ENST00000595631 DDB1Q16531 1140 aa18.75■□□□□ 0.59
SHKBP1-207ENST00000595631 TNS2Q63HR2 1409 aa18.74■□□□□ 0.59
SHKBP1-207ENST00000595631 EP400Q96L91 3159 aa18.74■□□□□ 0.59
SHKBP1-207ENST00000595631 IL2RBP14784 551 aa18.74■□□□□ 0.59
SHKBP1-207ENST00000595631 EIF4A2Q14240 407 aaKnown RBP18.74■□□□□ 0.59
SHKBP1-207ENST00000595631 MTHFSP49914 203 aa18.73■□□□□ 0.59
SHKBP1-207ENST00000595631 CDCA7Q9BWT1 371 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-207ENST00000595631 PKD1L3Q7Z443 1732 aa18.72■□□□□ 0.59
SHKBP1-207ENST00000595631 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
SHKBP1-207ENST00000595631 KAT6BQ8WYB5 2073 aa18.72■□□□□ 0.59
SHKBP1-207ENST00000595631 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-207ENST00000595631 EYA1Q99502 592 aa18.71■□□□□ 0.59
SHKBP1-207ENST00000595631 OVOS2A0A0G2JMS6 1433 aa18.7■□□□□ 0.58
SHKBP1-207ENST00000595631 COL3A1P02461 1466 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-207ENST00000595631 EXOC5O00471 708 aa18.69■□□□□ 0.58
SHKBP1-207ENST00000595631 DOT1LQ8TEK3 1739 aa18.69■□□□□ 0.58
SHKBP1-207ENST00000595631 ZNF316A6NFI3 1004 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-207ENST00000595631 FAM196AQ6ZSG2 479 aa18.67■□□□□ 0.58
SHKBP1-207ENST00000595631 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
SHKBP1-207ENST00000595631 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
SHKBP1-207ENST00000595631 RAPGEF4Q8WZA2 1011 aa18.66■□□□□ 0.58
SHKBP1-207ENST00000595631 IGSF1Q8N6C5 1336 aa18.66■□□□□ 0.58
SHKBP1-207ENST00000595631 PARD3Q8TEW0 1356 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms