RNA–Protein interactions for RNA: ENST00000595560.1

ZNF550-207, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-207ENST00000595560 LARP1Q6PKG0 1096 aaKnown RBP22.05■■□□□ 1.12
ZNF550-207ENST00000595560 KRT27Q7Z3Y8 459 aa22.05■■□□□ 1.12
ZNF550-207ENST00000595560 SOX12O15370 315 aa22.04■■□□□ 1.12
ZNF550-207ENST00000595560 CRB1P82279 1406 aa22.04■■□□□ 1.12
ZNF550-207ENST00000595560 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
ZNF550-207ENST00000595560 BARGINQ6ZT62 677 aa22.03■■□□□ 1.12
ZNF550-207ENST00000595560 CCDC125Q86Z20 511 aa22.02■■□□□ 1.12
ZNF550-207ENST00000595560 KIF20BQ96Q89 1820 aa22.01■■□□□ 1.11
ZNF550-207ENST00000595560 WNK3Q9BYP7 1800 aa22.01■■□□□ 1.11
ZNF550-207ENST00000595560 PARP4Q9UKK3 1724 aaKnown RBP22.01■■□□□ 1.11
ZNF550-207ENST00000595560 TCP11L2Q8N4U5 519 aa22.01■■□□□ 1.11
ZNF550-207ENST00000595560 USP35Q9P2H5 1018 aa22.01■■□□□ 1.11
ZNF550-207ENST00000595560 AXIN2Q9Y2T1 843 aa22.01■■□□□ 1.11
ZNF550-207ENST00000595560 THRAP3Q9Y2W1 955 aaKnown RBP22.01■■□□□ 1.11
ZNF550-207ENST00000595560 BLMP54132 1417 aaPredicted RBP22■■□□□ 1.11
ZNF550-207ENST00000595560 WDR17Q8IZU2 1322 aa21.99■■□□□ 1.11
ZNF550-207ENST00000595560 HSPA5P11021 654 aaKnown RBP21.98■■□□□ 1.11
ZNF550-207ENST00000595560 COG3Q96JB2 828 aa21.96■■□□□ 1.11
ZNF550-207ENST00000595560 RGPD1P0DJD0 1748 aa21.95■■□□□ 1.1
ZNF550-207ENST00000595560 TOM1L2Q6ZVM7 507 aa21.95■■□□□ 1.1
ZNF550-207ENST00000595560 LRRC37A3O60309 1634 aa21.95■■□□□ 1.1
ZNF550-207ENST00000595560 FYB1O15117 783 aa21.93■■□□□ 1.1
ZNF550-207ENST00000595560 NSD3Q9BZ95 1437 aa21.92■■□□□ 1.1
ZNF550-207ENST00000595560 CARD10Q9BWT7 1032 aa21.92■■□□□ 1.1
ZNF550-207ENST00000595560 FAM208AQ9UK61 1670 aaKnown RBP21.91■■□□□ 1.1
ZNF550-207ENST00000595560 ERBB3P21860 1342 aa21.91■■□□□ 1.1
ZNF550-207ENST00000595560 CSB-PGBD3P0DP91 1061 aa21.91■■□□□ 1.1
ZNF550-207ENST00000595560 CARD14Q9BXL6 1004 aa21.91■■□□□ 1.1
ZNF550-207ENST00000595560 TNS1Q9HBL0 1735 aaKnown RBP21.91■■□□□ 1.1
ZNF550-207ENST00000595560 FAM182BQ5T319 152 aa21.9■■□□□ 1.1
ZNF550-207ENST00000595560 CCDC7Q96M83 1385 aa21.89■■□□□ 1.1
ZNF550-207ENST00000595560 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
ZNF550-207ENST00000595560 SF3B2Q13435 895 aaKnown RBP21.89■■□□□ 1.09
ZNF550-207ENST00000595560 GGNBP2Q9H3C7 697 aa21.89■■□□□ 1.09
ZNF550-207ENST00000595560 DISP2A7MBM2 1401 aa21.89■■□□□ 1.09
ZNF550-207ENST00000595560 CDCA7Q9BWT1 371 aaPredicted RBP21.88■■□□□ 1.09
ZNF550-207ENST00000595560 MAP3K19Q56UN5 1328 aa21.87■■□□□ 1.09
ZNF550-207ENST00000595560 PEAK1Q9H792 1746 aa21.87■■□□□ 1.09
ZNF550-207ENST00000595560 FAM196AQ6ZSG2 479 aa21.87■■□□□ 1.09
ZNF550-207ENST00000595560 IP6K1Q92551 441 aa21.87■■□□□ 1.09
ZNF550-207ENST00000595560 RTL1A6NKG5 1358 aa21.87■■□□□ 1.09
ZNF550-207ENST00000595560 ANKRD24Q8TF21 1146 aa21.86■■□□□ 1.09
ZNF550-207ENST00000595560 POLR3GLQ9BT43 218 aa21.86■■□□□ 1.09
ZNF550-207ENST00000595560 ANKRD26Q9UPS8 1709 aa21.86■■□□□ 1.09
ZNF550-207ENST00000595560 CGNL1Q0VF96 1302 aa21.83■■□□□ 1.09
ZNF550-207ENST00000595560 FBLN1P23142 703 aa21.83■■□□□ 1.09
ZNF550-207ENST00000595560 DDB1Q16531 1140 aa21.83■■□□□ 1.09
ZNF550-207ENST00000595560 OVOS2A0A0G2JMS6 1433 aa21.82■■□□□ 1.08
ZNF550-207ENST00000595560 C11orf95C9JLR9 678 aaPredicted RBP21.82■■□□□ 1.08
ZNF550-207ENST00000595560 HOXC9P31274 260 aa21.82■■□□□ 1.08
ZNF550-207ENST00000595560 DEFB132Q7Z7B7 95 aa21.82■■□□□ 1.08
ZNF550-207ENST00000595560 NLRP2Q9NX02 1062 aa21.82■■□□□ 1.08
ZNF550-207ENST00000595560 SBF2Q86WG5 1849 aa21.82■■□□□ 1.08
ZNF550-207ENST00000595560 BAG6P46379 1132 aa21.81■■□□□ 1.08
ZNF550-207ENST00000595560 AMPHP49418 695 aa21.81■■□□□ 1.08
ZNF550-207ENST00000595560 TNS2Q63HR2 1409 aa21.8■■□□□ 1.08
ZNF550-207ENST00000595560 RGPD2P0DJD1 1756 aa21.8■■□□□ 1.08
ZNF550-207ENST00000595560 KIF24Q5T7B8 1368 aa21.8■■□□□ 1.08
ZNF550-207ENST00000595560 RRS1Q15050 365 aaKnown RBP21.8■■□□□ 1.08
ZNF550-207ENST00000595560 TRIM37O94972 964 aa21.78■■□□□ 1.08
ZNF550-207ENST00000595560 BCL9O00512 1426 aa21.78■■□□□ 1.08
ZNF550-207ENST00000595560 MAP2P11137 1827 aaKnown RBP21.78■■□□□ 1.08
ZNF550-207ENST00000595560 FLT4P35916 1363 aa21.77■■□□□ 1.08
ZNF550-207ENST00000595560 PANK3Q9H999 370 aa21.77■■□□□ 1.08
ZNF550-207ENST00000595560 IL2RBP14784 551 aa21.76■■□□□ 1.07
ZNF550-207ENST00000595560 LTV1Q96GA3 475 aaPredicted RBP21.76■■□□□ 1.07
ZNF550-207ENST00000595560 KIF7Q2M1P5 1343 aa21.76■■□□□ 1.07
ZNF550-207ENST00000595560 INSRP06213 1382 aa21.75■■□□□ 1.07
ZNF550-207ENST00000595560 SMG6Q86US8 1419 aaKnown RBP21.75■■□□□ 1.07
ZNF550-207ENST00000595560 EXOC5O00471 708 aa21.75■■□□□ 1.07
ZNF550-207ENST00000595560 MARCH10Q8NA82 808 aaPredicted RBP21.75■■□□□ 1.07
ZNF550-207ENST00000595560 NSD2O96028 1365 aa21.74■■□□□ 1.07
ZNF550-207ENST00000595560 EN1Q05925 392 aaPredicted RBP21.73■■□□□ 1.07
ZNF550-207ENST00000595560 RGPD3A6NKT7 1758 aaPredicted RBP21.73■■□□□ 1.07
ZNF550-207ENST00000595560 RGPD4Q7Z3J3 1758 aa21.73■■□□□ 1.07
ZNF550-207ENST00000595560 PARD3Q8TEW0 1356 aa21.73■■□□□ 1.07
ZNF550-207ENST00000595560 RREB1Q92766 1687 aa21.72■■□□□ 1.07
ZNF550-207ENST00000595560 EMILIN1Q9Y6C2 1016 aa21.71■■□□□ 1.07
ZNF550-207ENST00000595560 APBA3O96018 575 aa21.7■■□□□ 1.06
ZNF550-207ENST00000595560 HSP90AB2PQ58FF8 381 aa21.7■■□□□ 1.06
ZNF550-207ENST00000595560 CAMKK2Q96RR4 588 aa21.69■■□□□ 1.06
ZNF550-207ENST00000595560 NHSQ6T4R5 1651 aa21.69■■□□□ 1.06
ZNF550-207ENST00000595560 SHANK3Q9BYB0 1731 aa21.69■■□□□ 1.06
ZNF550-207ENST00000595560 NUP188Q5SRE5 1749 aa21.68■■□□□ 1.06
ZNF550-207ENST00000595560 MEGF6O75095 1541 aa21.67■■□□□ 1.06
ZNF550-207ENST00000595560 EZH2Q15910 746 aaKnown RBP21.67■■□□□ 1.06
ZNF550-207ENST00000595560 NBPF6Q5VWK0 638 aa21.67■■□□□ 1.06
ZNF550-207ENST00000595560 NBPF4Q96M43 638 aa21.67■■□□□ 1.06
ZNF550-207ENST00000595560 BCL11BQ9C0K0 894 aaPredicted RBP21.67■■□□□ 1.06
ZNF550-207ENST00000595560 WASHC2AQ641Q2 1341 aa21.66■■□□□ 1.06
ZNF550-207ENST00000595560 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
ZNF550-207ENST00000595560 KNSTRNQ9Y448 316 aa21.66■■□□□ 1.06
ZNF550-207ENST00000595560 NCAPD2Q15021 1401 aa21.64■■□□□ 1.06
ZNF550-207ENST00000595560 PPM1GO15355 546 aaPredicted RBP21.64■■□□□ 1.05
ZNF550-207ENST00000595560 TNNT2P45379 298 aaPredicted RBP21.63■■□□□ 1.05
ZNF550-207ENST00000595560 PTF1AQ7RTS3 328 aa21.62■■□□□ 1.05
ZNF550-207ENST00000595560 USHBP1Q8N6Y0 703 aa21.62■■□□□ 1.05
ZNF550-207ENST00000595560 KAT6BQ8WYB5 2073 aa21.61■■□□□ 1.05
ZNF550-207ENST00000595560 PLSCR1O15162 318 aa21.61■■□□□ 1.05
ZNF550-207ENST00000595560 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms