RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 FHDC1Q9C0D6 1143 aaPredicted RBP14.17□□□□□ -0.14
NOTCH3-202ENST00000595045 CABP2Q9NPB3 220 aa14.17□□□□□ -0.14
NOTCH3-202ENST00000595045 C1QTNF8P60827 252 aa14.16□□□□□ -0.14
NOTCH3-202ENST00000595045 SYT17Q9BSW7 474 aa14.16□□□□□ -0.14
NOTCH3-202ENST00000595045 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
NOTCH3-202ENST00000595045 MARCH10Q8NA82 808 aaPredicted RBP14.15□□□□□ -0.14
NOTCH3-202ENST00000595045 WNK3Q9BYP7 1800 aa14.15□□□□□ -0.14
NOTCH3-202ENST00000595045 AKAP12Q02952 1782 aa14.14□□□□□ -0.15
NOTCH3-202ENST00000595045 AATKQ6ZMQ8 1374 aa14.14□□□□□ -0.15
NOTCH3-202ENST00000595045 STK32BQ9NY57 414 aa14.14□□□□□ -0.15
NOTCH3-202ENST00000595045 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
NOTCH3-202ENST00000595045 BCL9O00512 1426 aa14.14□□□□□ -0.15
NOTCH3-202ENST00000595045 TXNRD1Q16881 649 aa14.13□□□□□ -0.15
NOTCH3-202ENST00000595045 TOM1L2Q6ZVM7 507 aa14.13□□□□□ -0.15
NOTCH3-202ENST00000595045 SGIP1Q9BQI5 828 aa14.13□□□□□ -0.15
NOTCH3-202ENST00000595045 COL18A1P39060 1754 aa14.13□□□□□ -0.15
NOTCH3-202ENST00000595045 PPIP5K1Q6PFW1 1433 aa14.13□□□□□ -0.15
NOTCH3-202ENST00000595045 CENPJQ9HC77 1338 aaPredicted RBP14.13□□□□□ -0.15
NOTCH3-202ENST00000595045 SRPK2P78362 688 aaKnown RBP14.12□□□□□ -0.15
NOTCH3-202ENST00000595045 SLC15A2Q16348 729 aa14.12□□□□□ -0.15
NOTCH3-202ENST00000595045 MTFR1LQ9H019 292 aa14.12□□□□□ -0.15
NOTCH3-202ENST00000595045 AXIN2Q9Y2T1 843 aa14.12□□□□□ -0.15
NOTCH3-202ENST00000595045 SLIT3O75094 1523 aa14.11□□□□□ -0.15
NOTCH3-202ENST00000595045 IFFO2Q5TF58 517 aa14.11□□□□□ -0.15
NOTCH3-202ENST00000595045 L3MBTL2Q969R5 705 aa14.11□□□□□ -0.15
NOTCH3-202ENST00000595045 USP6P35125 1406 aa14.1□□□□□ -0.15
NOTCH3-202ENST00000595045 NLRP6P59044 892 aa14.1□□□□□ -0.15
NOTCH3-202ENST00000595045 WDR17Q8IZU2 1322 aa14.1□□□□□ -0.15
NOTCH3-202ENST00000595045 BRD4O60885 1362 aaPredicted RBP14.09□□□□□ -0.15
NOTCH3-202ENST00000595045 CDCA7Q9BWT1 371 aaPredicted RBP14.09□□□□□ -0.15
NOTCH3-202ENST00000595045 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
NOTCH3-202ENST00000595045 ARXQ96QS3 562 aa14.08□□□□□ -0.16
NOTCH3-202ENST00000595045 MAP3K5Q99683 1374 aa14.08□□□□□ -0.16
NOTCH3-202ENST00000595045 KAT6BQ8WYB5 2073 aa14.07□□□□□ -0.16
NOTCH3-202ENST00000595045 ARHGEF25Q86VW2 580 aa14.07□□□□□ -0.16
NOTCH3-202ENST00000595045 PIK3C2AO00443 1686 aa14.07□□□□□ -0.16
NOTCH3-202ENST00000595045 CPSF1Q10570 1443 aaKnown RBP14.07□□□□□ -0.16
NOTCH3-202ENST00000595045 SIN3AQ96ST3 1273 aa14.06□□□□□ -0.16
NOTCH3-202ENST00000595045 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
NOTCH3-202ENST00000595045 KIAA1210Q9ULL0 1709 aa14.06□□□□□ -0.16
NOTCH3-202ENST00000595045 PAPPAQ13219 1627 aa14.05□□□□□ -0.16
NOTCH3-202ENST00000595045 EXOC5O00471 708 aa14.05□□□□□ -0.16
NOTCH3-202ENST00000595045 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
NOTCH3-202ENST00000595045 NHSQ6T4R5 1651 aa14.04□□□□□ -0.16
NOTCH3-202ENST00000595045 GIGYF1O75420 1035 aaPredicted RBP14.04□□□□□ -0.16
NOTCH3-202ENST00000595045 GPR162Q16538 588 aa14.04□□□□□ -0.16
NOTCH3-202ENST00000595045 CSB-PGBD3P0DP91 1061 aa14.03□□□□□ -0.16
NOTCH3-202ENST00000595045 TNS2Q63HR2 1409 aa14.03□□□□□ -0.16
NOTCH3-202ENST00000595045 QRICH2Q9H0J4 1663 aa14.02□□□□□ -0.16
NOTCH3-202ENST00000595045 TRPM1Q7Z4N2 1603 aa14.02□□□□□ -0.16
NOTCH3-202ENST00000595045 ZNF827Q17R98 1081 aa14.02□□□□□ -0.17
NOTCH3-202ENST00000595045 ACSBG1Q96GR2 724 aa14.02□□□□□ -0.17
NOTCH3-202ENST00000595045 BTAF1O14981 1849 aa14.01□□□□□ -0.17
NOTCH3-202ENST00000595045 EVC2Q86UK5 1308 aa14.01□□□□□ -0.17
NOTCH3-202ENST00000595045 SOX12O15370 315 aa14.01□□□□□ -0.17
NOTCH3-202ENST00000595045 CCDC7Q96M83 1385 aa14□□□□□ -0.17
NOTCH3-202ENST00000595045 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
NOTCH3-202ENST00000595045 SHANK3Q9BYB0 1731 aa14□□□□□ -0.17
NOTCH3-202ENST00000595045 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
NOTCH3-202ENST00000595045 LRRC4BQ9NT99 713 aa13.99□□□□□ -0.17
NOTCH3-202ENST00000595045 NFAT5O94916 1531 aa13.99□□□□□ -0.17
NOTCH3-202ENST00000595045 ABCC6O95255 1503 aa13.99□□□□□ -0.17
NOTCH3-202ENST00000595045 PELP1Q8IZL8 1130 aaKnown RBP13.98□□□□□ -0.17
NOTCH3-202ENST00000595045 KLHL34Q8N239 644 aa13.98□□□□□ -0.17
NOTCH3-202ENST00000595045 COL24A1Q17RW2 1714 aa13.98□□□□□ -0.17
NOTCH3-202ENST00000595045 TTC21AQ8NDW8 1320 aa13.97□□□□□ -0.17
NOTCH3-202ENST00000595045 QSER1Q2KHR3 1735 aa13.97□□□□□ -0.17
NOTCH3-202ENST00000595045 CD163L1Q9NR16 1453 aa13.96□□□□□ -0.17
NOTCH3-202ENST00000595045 SLC16A10Q8TF71 515 aa13.96□□□□□ -0.17
NOTCH3-202ENST00000595045 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
NOTCH3-202ENST00000595045 ROCK2O75116 1388 aaKnown RBP13.96□□□□□ -0.18
NOTCH3-202ENST00000595045 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
NOTCH3-202ENST00000595045 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.18
NOTCH3-202ENST00000595045 TUBGCP6Q96RT7 1819 aa13.95□□□□□ -0.18
NOTCH3-202ENST00000595045 POLD1P28340 1107 aa13.95□□□□□ -0.18
NOTCH3-202ENST00000595045 NLGN2Q8NFZ4 835 aa13.95□□□□□ -0.18
NOTCH3-202ENST00000595045 NEUROD1Q13562 356 aa13.94□□□□□ -0.18
NOTCH3-202ENST00000595045 NME9Q86XW9 330 aa13.94□□□□□ -0.18
NOTCH3-202ENST00000595045 ERBB3P21860 1342 aa13.93□□□□□ -0.18
NOTCH3-202ENST00000595045 PNPLA7Q6ZV29 1317 aa13.93□□□□□ -0.18
NOTCH3-202ENST00000595045 IL2RBP14784 551 aa13.93□□□□□ -0.18
NOTCH3-202ENST00000595045 NLRP2Q9NX02 1062 aa13.93□□□□□ -0.18
NOTCH3-202ENST00000595045 KTN1Q86UP2 1357 aaKnown RBP13.93□□□□□ -0.18
NOTCH3-202ENST00000595045 YBX3P16989 372 aaKnown RBP eCLIP13.92□□□□□ -0.18
NOTCH3-202ENST00000595045 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
NOTCH3-202ENST00000595045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.18
NOTCH3-202ENST00000595045 SLC12A5Q9H2X9 1139 aa13.92□□□□□ -0.18
NOTCH3-202ENST00000595045 GRIN3BO60391 1043 aa13.9□□□□□ -0.18
NOTCH3-202ENST00000595045 KCNQ4P56696 695 aa13.9□□□□□ -0.18
NOTCH3-202ENST00000595045 TFCP2L1Q9NZI6 479 aa13.9□□□□□ -0.18
NOTCH3-202ENST00000595045 LTN1O94822 1766 aa13.9□□□□□ -0.18
NOTCH3-202ENST00000595045 ATP10DQ9P241 1426 aa13.89□□□□□ -0.19
NOTCH3-202ENST00000595045 MON2Q7Z3U7 1717 aa13.88□□□□□ -0.19
NOTCH3-202ENST00000595045 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
NOTCH3-202ENST00000595045 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
NOTCH3-202ENST00000595045 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
NOTCH3-202ENST00000595045 TESK2Q96S53 571 aa13.87□□□□□ -0.19
NOTCH3-202ENST00000595045 LY75O60449 1722 aa13.87□□□□□ -0.19
NOTCH3-202ENST00000595045 CARD11Q9BXL7 1154 aa13.86□□□□□ -0.19
NOTCH3-202ENST00000595045 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms