RNA–Protein interactions for RNA: ENST00000594942.5

SOX2-OT-221, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 675 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-221ENST00000594942 PUS7Q96PZ0 661 aaKnown RBP17.71■□□□□ 0.43
SOX2-OT-221ENST00000594942 WDR17Q8IZU2 1322 aa17.71■□□□□ 0.42
SOX2-OT-221ENST00000594942 WNK3Q9BYP7 1800 aa17.7■□□□□ 0.42
SOX2-OT-221ENST00000594942 PEAK1Q9H792 1746 aa17.7■□□□□ 0.42
SOX2-OT-221ENST00000594942 AXIN2Q9Y2T1 843 aa17.7■□□□□ 0.42
SOX2-OT-221ENST00000594942 RREB1Q92766 1687 aa17.7■□□□□ 0.42
SOX2-OT-221ENST00000594942 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
SOX2-OT-221ENST00000594942 PSDA5PKW4 1024 aaPredicted RBP17.69■□□□□ 0.42
SOX2-OT-221ENST00000594942 APBA3O96018 575 aa17.69■□□□□ 0.42
SOX2-OT-221ENST00000594942 OVOS2A0A0G2JMS6 1433 aa17.68■□□□□ 0.42
SOX2-OT-221ENST00000594942 OVOS2A0A0J9YW53 1432 aa17.68■□□□□ 0.42
SOX2-OT-221ENST00000594942 OVOS2Q6IE36 1432 aa17.68■□□□□ 0.42
SOX2-OT-221ENST00000594942 TOM1L2Q6ZVM7 507 aa17.68■□□□□ 0.42
SOX2-OT-221ENST00000594942 RGPD5Q99666 1765 aa17.68■□□□□ 0.42
SOX2-OT-221ENST00000594942 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
SOX2-OT-221ENST00000594942 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
SOX2-OT-221ENST00000594942 BCL9O00512 1426 aa17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 EDC4Q6P2E9 1401 aaKnown RBP17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 NUP188Q5SRE5 1749 aa17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 R3HDM1Q15032 1099 aaKnown RBP17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 DDB1Q16531 1140 aa17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 HDGFL2Q7Z4V5 671 aaPredicted RBP17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 SBF2Q86WG5 1849 aa17.65■□□□□ 0.42
SOX2-OT-221ENST00000594942 RGPD3A6NKT7 1758 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-221ENST00000594942 RGPD4Q7Z3J3 1758 aa17.64■□□□□ 0.41
SOX2-OT-221ENST00000594942 SOX12O15370 315 aa17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 SLC24A1O60721 1099 aa17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 TESK2Q96S53 571 aa17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 SLC12A5Q9H2X9 1139 aa17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
SOX2-OT-221ENST00000594942 NME9Q86XW9 330 aa17.62■□□□□ 0.41
SOX2-OT-221ENST00000594942 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
SOX2-OT-221ENST00000594942 A0A1W2PP64 1363 aa17.62■□□□□ 0.41
SOX2-OT-221ENST00000594942 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
SOX2-OT-221ENST00000594942 LTN1O94822 1766 aa17.61■□□□□ 0.41
SOX2-OT-221ENST00000594942 MARCH10Q8NA82 808 aaPredicted RBP17.6■□□□□ 0.41
SOX2-OT-221ENST00000594942 ERBB3P21860 1342 aa17.59■□□□□ 0.41
SOX2-OT-221ENST00000594942 ST20-MTHFSA0A0A6YYL1 179 aa17.59■□□□□ 0.41
SOX2-OT-221ENST00000594942 PLSCR1O15162 318 aa17.59■□□□□ 0.41
SOX2-OT-221ENST00000594942 NBPF14Q5TI25 921 aa17.59■□□□□ 0.41
SOX2-OT-221ENST00000594942 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
SOX2-OT-221ENST00000594942 TNS2Q63HR2 1409 aa17.57■□□□□ 0.4
SOX2-OT-221ENST00000594942 EXOC5O00471 708 aa17.56■□□□□ 0.4
SOX2-OT-221ENST00000594942 ANKRD24Q8TF21 1146 aa17.53■□□□□ 0.4
SOX2-OT-221ENST00000594942 ANKRD36BQ8N2N9 1353 aa17.53■□□□□ 0.4
SOX2-OT-221ENST00000594942 FAM208AQ9UK61 1670 aaKnown RBP17.52■□□□□ 0.4
SOX2-OT-221ENST00000594942 PTF1AQ7RTS3 328 aa17.52■□□□□ 0.4
SOX2-OT-221ENST00000594942 IP6K1Q92551 441 aa17.52■□□□□ 0.4
SOX2-OT-221ENST00000594942 NLRP2Q9NX02 1062 aa17.52■□□□□ 0.4
SOX2-OT-221ENST00000594942 USP47Q96K76 1375 aa17.52■□□□□ 0.39
SOX2-OT-221ENST00000594942 IL2RBP14784 551 aa17.51■□□□□ 0.39
SOX2-OT-221ENST00000594942 NHSQ6T4R5 1651 aa17.51■□□□□ 0.39
SOX2-OT-221ENST00000594942 TMF1P82094 1093 aa17.5■□□□□ 0.39
SOX2-OT-221ENST00000594942 COG3Q96JB2 828 aa17.5■□□□□ 0.39
SOX2-OT-221ENST00000594942 PROM2Q8N271 834 aa17.49■□□□□ 0.39
SOX2-OT-221ENST00000594942 TIMELESSQ9UNS1 1208 aa17.49■□□□□ 0.39
SOX2-OT-221ENST00000594942 ANO8Q9HCE9 1232 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-221ENST00000594942 CASZ1Q86V15 1759 aa17.47■□□□□ 0.39
SOX2-OT-221ENST00000594942 MAP3K19Q56UN5 1328 aa17.47■□□□□ 0.39
SOX2-OT-221ENST00000594942 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
SOX2-OT-221ENST00000594942 RTL1A6NKG5 1358 aa17.46■□□□□ 0.39
SOX2-OT-221ENST00000594942 KCNQ2O43526 872 aa17.46■□□□□ 0.39
SOX2-OT-221ENST00000594942 CDCA8Q53HL2 280 aa17.46■□□□□ 0.39
SOX2-OT-221ENST00000594942 SPON1Q9HCB6 807 aa17.46■□□□□ 0.39
SOX2-OT-221ENST00000594942 HOXC9P31274 260 aa17.45■□□□□ 0.38
SOX2-OT-221ENST00000594942 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
SOX2-OT-221ENST00000594942 FYB1O15117 783 aa17.43■□□□□ 0.38
SOX2-OT-221ENST00000594942 BTAF1O14981 1849 aa17.42■□□□□ 0.38
SOX2-OT-221ENST00000594942 AMPHP49418 695 aa17.42■□□□□ 0.38
SOX2-OT-221ENST00000594942 ACSBG1Q96GR2 724 aa17.42■□□□□ 0.38
SOX2-OT-221ENST00000594942 KIF20BQ96Q89 1820 aa17.42■□□□□ 0.38
SOX2-OT-221ENST00000594942 LTV1Q96GA3 475 aaPredicted RBP17.41■□□□□ 0.38
SOX2-OT-221ENST00000594942 STK32BQ9NY57 414 aa17.41■□□□□ 0.38
SOX2-OT-221ENST00000594942 MYOM1P52179 1685 aa17.41■□□□□ 0.38
SOX2-OT-221ENST00000594942 PAPPAQ13219 1627 aa17.4■□□□□ 0.38
SOX2-OT-221ENST00000594942 FBLN1P23142 703 aa17.4■□□□□ 0.38
SOX2-OT-221ENST00000594942 SLC15A2Q16348 729 aa17.4■□□□□ 0.38
SOX2-OT-221ENST00000594942 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
SOX2-OT-221ENST00000594942 RGPD2P0DJD1 1756 aa17.4■□□□□ 0.38
SOX2-OT-221ENST00000594942 KAT6BQ8WYB5 2073 aa17.4■□□□□ 0.38
SOX2-OT-221ENST00000594942 KIF24Q5T7B8 1368 aa17.39■□□□□ 0.37
SOX2-OT-221ENST00000594942 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
SOX2-OT-221ENST00000594942 PPP1R1BQ9UD71 204 aaPredicted RBP17.38■□□□□ 0.37
SOX2-OT-221ENST00000594942 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
SOX2-OT-221ENST00000594942 MEGF6O75095 1541 aa17.37■□□□□ 0.37
SOX2-OT-221ENST00000594942 DDX54Q8TDD1 881 aaKnown RBP17.36■□□□□ 0.37
SOX2-OT-221ENST00000594942 PDGFDQ9GZP0 370 aaPredicted RBP17.36■□□□□ 0.37
SOX2-OT-221ENST00000594942 CGNL1Q0VF96 1302 aa17.36■□□□□ 0.37
SOX2-OT-221ENST00000594942 INSRP06213 1382 aa17.36■□□□□ 0.37
SOX2-OT-221ENST00000594942 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
SOX2-OT-221ENST00000594942 NBPF6Q5VWK0 638 aa17.35■□□□□ 0.37
SOX2-OT-221ENST00000594942 ZCRB1Q8TBF4 217 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-221ENST00000594942 NBPF4Q96M43 638 aa17.35■□□□□ 0.37
SOX2-OT-221ENST00000594942 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
SOX2-OT-221ENST00000594942 FLT4P35916 1363 aa17.35■□□□□ 0.37
SOX2-OT-221ENST00000594942 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms