RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 NFAT5O94916 1531 aa22.17■■□□□ 1.14
USHBP1-204ENST00000594190 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
USHBP1-204ENST00000594190 TTC21BQ7Z4L5 1316 aa22.16■■□□□ 1.14
USHBP1-204ENST00000594190 PUS7Q96PZ0 661 aaKnown RBP22.16■■□□□ 1.14
USHBP1-204ENST00000594190 ZNF692Q9BU19 519 aaPredicted RBP22.16■■□□□ 1.14
USHBP1-204ENST00000594190 NLRP6P59044 892 aa22.15■■□□□ 1.14
USHBP1-204ENST00000594190 SBF2Q86WG5 1849 aa22.14■■□□□ 1.13
USHBP1-204ENST00000594190 CRB1P82279 1406 aa22.14■■□□□ 1.13
USHBP1-204ENST00000594190 LRRC37A3O60309 1634 aa22.13■■□□□ 1.13
USHBP1-204ENST00000594190 EN1Q05925 392 aaPredicted RBP22.13■■□□□ 1.13
USHBP1-204ENST00000594190 THRAP3Q9Y2W1 955 aaKnown RBP22.13■■□□□ 1.13
USHBP1-204ENST00000594190 RREB1Q92766 1687 aa22.13■■□□□ 1.13
USHBP1-204ENST00000594190 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
USHBP1-204ENST00000594190 TCP11L2Q8N4U5 519 aa22.12■■□□□ 1.13
USHBP1-204ENST00000594190 ABCC6O95255 1503 aa22.11■■□□□ 1.13
USHBP1-204ENST00000594190 EVA1CP58658 441 aa22.11■■□□□ 1.13
USHBP1-204ENST00000594190 AXIN2Q9Y2T1 843 aa22.11■■□□□ 1.13
USHBP1-204ENST00000594190 ANP32CO43423 234 aa22.1■■□□□ 1.13
USHBP1-204ENST00000594190 ARHGEF25Q86VW2 580 aa22.1■■□□□ 1.13
USHBP1-204ENST00000594190 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
USHBP1-204ENST00000594190 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
USHBP1-204ENST00000594190 USP31Q70CQ4 1352 aa22.1■■□□□ 1.13
USHBP1-204ENST00000594190 LTN1O94822 1766 aa22.09■■□□□ 1.13
USHBP1-204ENST00000594190 KTN1Q86UP2 1357 aaKnown RBP22.09■■□□□ 1.13
USHBP1-204ENST00000594190 R3HDM1Q15032 1099 aaKnown RBP22.08■■□□□ 1.13
USHBP1-204ENST00000594190 FAM196AQ6ZSG2 479 aa22.08■■□□□ 1.13
USHBP1-204ENST00000594190 NUP188Q5SRE5 1749 aa22.07■■□□□ 1.12
USHBP1-204ENST00000594190 CAMKK2Q96RR4 588 aa22.06■■□□□ 1.12
USHBP1-204ENST00000594190 RGPD3A6NKT7 1758 aaPredicted RBP22.05■■□□□ 1.12
USHBP1-204ENST00000594190 RGPD4Q7Z3J3 1758 aa22.05■■□□□ 1.12
USHBP1-204ENST00000594190 MIER1Q8N108 512 aa22.05■■□□□ 1.12
USHBP1-204ENST00000594190 WDR17Q8IZU2 1322 aa22.05■■□□□ 1.12
USHBP1-204ENST00000594190 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
USHBP1-204ENST00000594190 NINLQ9Y2I6 1382 aa22.03■■□□□ 1.12
USHBP1-204ENST00000594190 TRIM37O94972 964 aa22.03■■□□□ 1.12
USHBP1-204ENST00000594190 EZH2Q15910 746 aaKnown RBP22.03■■□□□ 1.12
USHBP1-204ENST00000594190 SLC12A5Q9H2X9 1139 aa22.02■■□□□ 1.12
USHBP1-204ENST00000594190 EDC4Q6P2E9 1401 aaKnown RBP22.02■■□□□ 1.12
USHBP1-204ENST00000594190 A0A1W2PP64 1363 aa22.01■■□□□ 1.11
USHBP1-204ENST00000594190 PARD3Q8TEW0 1356 aa22■■□□□ 1.11
USHBP1-204ENST00000594190 OVOS2A0A0J9YW53 1432 aa22■■□□□ 1.11
USHBP1-204ENST00000594190 OVOS2Q6IE36 1432 aa22■■□□□ 1.11
USHBP1-204ENST00000594190 PDE3BQ13370 1112 aa22■■□□□ 1.11
USHBP1-204ENST00000594190 MYOM1P52179 1685 aa22■■□□□ 1.11
USHBP1-204ENST00000594190 BCL9O00512 1426 aa21.99■■□□□ 1.11
USHBP1-204ENST00000594190 NME9Q86XW9 330 aa21.99■■□□□ 1.11
USHBP1-204ENST00000594190 CCER2I3L3R5 266 aa21.98■■□□□ 1.11
USHBP1-204ENST00000594190 OVOS2A0A0G2JMS6 1433 aa21.97■■□□□ 1.11
USHBP1-204ENST00000594190 TOM1L2Q6ZVM7 507 aa21.97■■□□□ 1.11
USHBP1-204ENST00000594190 CARD10Q9BWT7 1032 aa21.97■■□□□ 1.11
USHBP1-204ENST00000594190 ZBTB7CA1YPR0 619 aa21.96■■□□□ 1.11
USHBP1-204ENST00000594190 APBA3O96018 575 aa21.96■■□□□ 1.11
USHBP1-204ENST00000594190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.96■■□□□ 1.11
USHBP1-204ENST00000594190 PANK3Q9H999 370 aa21.94■■□□□ 1.1
USHBP1-204ENST00000594190 SOX12O15370 315 aa21.93■■□□□ 1.1
USHBP1-204ENST00000594190 TMC1Q8TDI8 760 aa21.93■■□□□ 1.1
USHBP1-204ENST00000594190 ERBB3P21860 1342 aa21.92■■□□□ 1.1
USHBP1-204ENST00000594190 DDB1Q16531 1140 aa21.92■■□□□ 1.1
USHBP1-204ENST00000594190 HDGFL2Q7Z4V5 671 aaPredicted RBP21.92■■□□□ 1.1
USHBP1-204ENST00000594190 MARCH10Q8NA82 808 aaPredicted RBP21.92■■□□□ 1.1
USHBP1-204ENST00000594190 CDCA7Q9BWT1 371 aaPredicted RBP21.92■■□□□ 1.1
USHBP1-204ENST00000594190 PRKRIP1Q9H875 184 aaPredicted RBP21.92■■□□□ 1.1
USHBP1-204ENST00000594190 FAM208AQ9UK61 1670 aaKnown RBP21.91■■□□□ 1.1
USHBP1-204ENST00000594190 NPC1L1Q9UHC9 1359 aa21.91■■□□□ 1.1
USHBP1-204ENST00000594190 PER1O15534 1290 aaPredicted RBP21.91■■□□□ 1.1
USHBP1-204ENST00000594190 TERF2IPQ9NYB0 399 aa21.91■■□□□ 1.1
USHBP1-204ENST00000594190 RALBP1Q15311 655 aa21.9■■□□□ 1.1
USHBP1-204ENST00000594190 NBPF14Q5TI25 921 aa21.9■■□□□ 1.1
USHBP1-204ENST00000594190 PTF1AQ7RTS3 328 aa21.9■■□□□ 1.1
USHBP1-204ENST00000594190 KNSTRNQ9Y448 316 aa21.9■■□□□ 1.1
USHBP1-204ENST00000594190 TNS2Q63HR2 1409 aa21.89■■□□□ 1.1
USHBP1-204ENST00000594190 RGPD2P0DJD1 1756 aa21.88■■□□□ 1.09
USHBP1-204ENST00000594190 NHSQ6T4R5 1651 aa21.88■■□□□ 1.09
USHBP1-204ENST00000594190 ANKRD36BQ8N2N9 1353 aa21.87■■□□□ 1.09
USHBP1-204ENST00000594190 PLSCR1O15162 318 aa21.87■■□□□ 1.09
USHBP1-204ENST00000594190 CASZ1Q86V15 1759 aa21.85■■□□□ 1.09
USHBP1-204ENST00000594190 BCL11BQ9C0K0 894 aaPredicted RBP21.85■■□□□ 1.09
USHBP1-204ENST00000594190 SHANK3Q9BYB0 1731 aa21.85■■□□□ 1.09
USHBP1-204ENST00000594190 KIF20BQ96Q89 1820 aa21.85■■□□□ 1.09
USHBP1-204ENST00000594190 CSB-PGBD3P0DP91 1061 aa21.84■■□□□ 1.09
USHBP1-204ENST00000594190 YY1P25490 414 aa21.84■■□□□ 1.09
USHBP1-204ENST00000594190 PROM2Q8N271 834 aa21.83■■□□□ 1.09
USHBP1-204ENST00000594190 DCAF8L1A6NGE4 600 aa21.82■■□□□ 1.08
USHBP1-204ENST00000594190 IP6K1Q92551 441 aa21.82■■□□□ 1.08
USHBP1-204ENST00000594190 PPP1R1BQ9UD71 204 aaPredicted RBP21.82■■□□□ 1.08
USHBP1-204ENST00000594190 ANKRD24Q8TF21 1146 aa21.81■■□□□ 1.08
USHBP1-204ENST00000594190 SPON1Q9HCB6 807 aa21.81■■□□□ 1.08
USHBP1-204ENST00000594190 BTAF1O14981 1849 aa21.8■■□□□ 1.08
USHBP1-204ENST00000594190 EXOC5O00471 708 aa21.8■■□□□ 1.08
USHBP1-204ENST00000594190 NSD2O96028 1365 aa21.79■■□□□ 1.08
USHBP1-204ENST00000594190 AMER1Q5JTC6 1135 aaPredicted RBP21.79■■□□□ 1.08
USHBP1-204ENST00000594190 MAP3K19Q56UN5 1328 aa21.79■■□□□ 1.08
USHBP1-204ENST00000594190 MYBBP1AQ9BQG0 1328 aaKnown RBP21.79■■□□□ 1.08
USHBP1-204ENST00000594190 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
USHBP1-204ENST00000594190 FYB1O15117 783 aa21.78■■□□□ 1.08
USHBP1-204ENST00000594190 FBLN1P23142 703 aa21.78■■□□□ 1.08
USHBP1-204ENST00000594190 KCNQ2O43526 872 aa21.77■■□□□ 1.08
USHBP1-204ENST00000594190 IL2RBP14784 551 aa21.77■■□□□ 1.08
USHBP1-204ENST00000594190 NLRP2Q9NX02 1062 aa21.77■■□□□ 1.08
USHBP1-204ENST00000594190 NSD3Q9BZ95 1437 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms