RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
VRK3-207ENST00000594092 NGEFQ8N5V2 710 aa20.04■□□□□ 0.8
VRK3-207ENST00000594092 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
VRK3-207ENST00000594092 PHRF1Q9P1Y6 1649 aaKnown RBP20.04■□□□□ 0.8
VRK3-207ENST00000594092 HMOX1P09601 288 aa20.04■□□□□ 0.8
VRK3-207ENST00000594092 ARHGEF25Q86VW2 580 aa20.04■□□□□ 0.8
VRK3-207ENST00000594092 IP6K1Q92551 441 aa20.04■□□□□ 0.8
VRK3-207ENST00000594092 ZNF521Q96K83 1311 aa20.03■□□□□ 0.8
VRK3-207ENST00000594092 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
VRK3-207ENST00000594092 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
VRK3-207ENST00000594092 RGPD1P0DJD0 1748 aa20.03■□□□□ 0.8
VRK3-207ENST00000594092 PRKAR2BP31323 418 aa20.02■□□□□ 0.79
VRK3-207ENST00000594092 CRYBG1Q9Y4K1 1723 aa20.01■□□□□ 0.79
VRK3-207ENST00000594092 MAPK8IP3Q9UPT6 1336 aa20.01■□□□□ 0.79
VRK3-207ENST00000594092 ZBTB7CA1YPR0 619 aa20.01■□□□□ 0.79
VRK3-207ENST00000594092 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
VRK3-207ENST00000594092 CABLES1Q8TDN4 633 aa20■□□□□ 0.79
VRK3-207ENST00000594092 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
VRK3-207ENST00000594092 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
VRK3-207ENST00000594092 SULT6B1Q6IMI4 303 aa19.99■□□□□ 0.79
VRK3-207ENST00000594092 AEBP1Q8IUX7 1158 aa19.99■□□□□ 0.79
VRK3-207ENST00000594092 CDCA7LQ96GN5 454 aa19.99■□□□□ 0.79
VRK3-207ENST00000594092 ZC3H6P61129 1189 aaKnown RBP19.98■□□□□ 0.79
VRK3-207ENST00000594092 PHF23Q9BUL5 403 aaPredicted RBP19.98■□□□□ 0.79
VRK3-207ENST00000594092 AHDC1Q5TGY3 1603 aaPredicted RBP19.98■□□□□ 0.79
VRK3-207ENST00000594092 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
VRK3-207ENST00000594092 WWC1Q8IX03 1113 aa19.97■□□□□ 0.79
VRK3-207ENST00000594092 EYA1Q99502 592 aa19.97■□□□□ 0.79
VRK3-207ENST00000594092 IGSF1Q8N6C5 1336 aa19.97■□□□□ 0.79
VRK3-207ENST00000594092 CCDC27Q2M243 656 aa19.97■□□□□ 0.79
VRK3-207ENST00000594092 LTV1Q96GA3 475 aaPredicted RBP19.97■□□□□ 0.79
VRK3-207ENST00000594092 PHACTR3Q96KR7 559 aa19.97■□□□□ 0.79
VRK3-207ENST00000594092 TOM1O60784 492 aa19.96■□□□□ 0.79
VRK3-207ENST00000594092 NEFMP07197 916 aa19.96■□□□□ 0.79
VRK3-207ENST00000594092 GOLGA2Q08379 1002 aa19.95■□□□□ 0.78
VRK3-207ENST00000594092 KDRP35968 1356 aa19.95■□□□□ 0.78
VRK3-207ENST00000594092 AXIN2Q9Y2T1 843 aa19.94■□□□□ 0.78
VRK3-207ENST00000594092 CPDO75976 1380 aa19.93■□□□□ 0.78
VRK3-207ENST00000594092 NFE2L2Q16236 605 aa19.92■□□□□ 0.78
VRK3-207ENST00000594092 LRRC59Q96AG4 307 aaKnown RBP19.92■□□□□ 0.78
VRK3-207ENST00000594092 NEFLP07196 543 aa19.92■□□□□ 0.78
VRK3-207ENST00000594092 RIPK4P57078 832 aa19.92■□□□□ 0.78
VRK3-207ENST00000594092 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
VRK3-207ENST00000594092 COL18A1P39060 1754 aa19.92■□□□□ 0.78
VRK3-207ENST00000594092 ABCA3Q99758 1704 aa19.92■□□□□ 0.78
VRK3-207ENST00000594092 KIAA0232Q92628 1395 aa19.91■□□□□ 0.78
VRK3-207ENST00000594092 SLFN5Q08AF3 891 aa19.91■□□□□ 0.78
VRK3-207ENST00000594092 SPINK5Q9NQ38 1064 aaPredicted RBP19.91■□□□□ 0.78
VRK3-207ENST00000594092 ABCC6O95255 1503 aa19.91■□□□□ 0.78
VRK3-207ENST00000594092 UBAP1LF5GYI3 381 aa19.9■□□□□ 0.78
VRK3-207ENST00000594092 PIP4K2BP78356 416 aa19.9■□□□□ 0.78
VRK3-207ENST00000594092 WDR63Q8IWG1 891 aa19.9■□□□□ 0.78
VRK3-207ENST00000594092 ANKRD24Q8TF21 1146 aa19.9■□□□□ 0.78
VRK3-207ENST00000594092 RGPD5Q99666 1765 aa19.9■□□□□ 0.78
VRK3-207ENST00000594092 NBPF6Q5VWK0 638 aa19.9■□□□□ 0.78
VRK3-207ENST00000594092 TRMT2AQ8IZ69 625 aaKnown RBP19.9■□□□□ 0.78
VRK3-207ENST00000594092 NBPF4Q96M43 638 aa19.9■□□□□ 0.78
VRK3-207ENST00000594092 CHRNA2Q15822 529 aa19.89■□□□□ 0.77
VRK3-207ENST00000594092 DUSP27Q5VZP5 1158 aa19.89■□□□□ 0.77
VRK3-207ENST00000594092 SUPT16HQ9Y5B9 1047 aaKnown RBP19.89■□□□□ 0.77
VRK3-207ENST00000594092 E9PSI1 815 aa19.88■□□□□ 0.77
VRK3-207ENST00000594092 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
VRK3-207ENST00000594092 ERBB3P21860 1342 aa19.88■□□□□ 0.77
VRK3-207ENST00000594092 RGPD2P0DJD1 1756 aa19.88■□□□□ 0.77
VRK3-207ENST00000594092 HAP1P54257 671 aaPredicted RBP19.88■□□□□ 0.77
VRK3-207ENST00000594092 USHBP1Q8N6Y0 703 aa19.88■□□□□ 0.77
VRK3-207ENST00000594092 CERKQ8TCT0 537 aa19.87■□□□□ 0.77
VRK3-207ENST00000594092 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
VRK3-207ENST00000594092 NCAPD2Q15021 1401 aa19.86■□□□□ 0.77
VRK3-207ENST00000594092 PRDM11Q9NQV5 511 aa19.86■□□□□ 0.77
VRK3-207ENST00000594092 DLG5Q8TDM6 1919 aa19.85■□□□□ 0.77
VRK3-207ENST00000594092 COL22A1Q8NFW1 1626 aaPredicted RBP19.85■□□□□ 0.77
VRK3-207ENST00000594092 CAMTA1Q9Y6Y1 1673 aa19.85■□□□□ 0.77
VRK3-207ENST00000594092 FKBP8Q14318 412 aa19.83■□□□□ 0.76
VRK3-207ENST00000594092 LMO7Q8WWI1 1683 aa19.83■□□□□ 0.76
VRK3-207ENST00000594092 LMOD3Q0VAK6 560 aa19.82■□□□□ 0.76
VRK3-207ENST00000594092 MTHFSDQ2M296 383 aaKnown RBP19.82■□□□□ 0.76
VRK3-207ENST00000594092 IL16Q14005 1332 aa19.82■□□□□ 0.76
VRK3-207ENST00000594092 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
VRK3-207ENST00000594092 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
VRK3-207ENST00000594092 FAM208AQ9UK61 1670 aaKnown RBP19.79■□□□□ 0.76
VRK3-207ENST00000594092 NLRP2Q9NX02 1062 aa19.79■□□□□ 0.76
VRK3-207ENST00000594092 FAM83GA6ND36 823 aa19.79■□□□□ 0.76
VRK3-207ENST00000594092 CSB-PGBD3P0DP91 1061 aa19.79■□□□□ 0.76
VRK3-207ENST00000594092 THUMPD2Q9BTF0 503 aaKnown RBP19.79■□□□□ 0.76
VRK3-207ENST00000594092 MYH16Q9H6N6 1097 aa19.79■□□□□ 0.76
VRK3-207ENST00000594092 COL5A2P05997 1499 aaPredicted RBP19.77■□□□□ 0.76
VRK3-207ENST00000594092 CALD1Q05682 793 aaKnown RBP19.77■□□□□ 0.76
VRK3-207ENST00000594092 RNF123Q5XPI4 1314 aa19.76■□□□□ 0.75
VRK3-207ENST00000594092 DCTN1Q14203 1278 aa19.76■□□□□ 0.75
VRK3-207ENST00000594092 WDR17Q8IZU2 1322 aa19.75■□□□□ 0.75
VRK3-207ENST00000594092 FANCIQ9NVI1 1328 aa19.75■□□□□ 0.75
VRK3-207ENST00000594092 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
VRK3-207ENST00000594092 MCM10Q7L590 875 aa19.74■□□□□ 0.75
VRK3-207ENST00000594092 HTATSF1O43719 755 aaKnown RBP19.73■□□□□ 0.75
VRK3-207ENST00000594092 IFT57Q9NWB7 429 aa19.73■□□□□ 0.75
VRK3-207ENST00000594092 COL14A1Q05707 1796 aaKnown RBP19.73■□□□□ 0.75
VRK3-207ENST00000594092 GNAT3A8MTJ3 354 aa19.72■□□□□ 0.75
VRK3-207ENST00000594092 ZNF853P0CG23 659 aa19.72■□□□□ 0.75
VRK3-207ENST00000594092 AMOTQ4VCS5 1084 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms