RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 CCDC61Q9Y6R9 512 aa12.49□□□□□ -0.41
SMG9-202ENST00000594081 NHSQ6T4R5 1651 aa12.48□□□□□ -0.41
SMG9-202ENST00000594081 PAPPAQ13219 1627 aa12.48□□□□□ -0.41
SMG9-202ENST00000594081 BCL9O00512 1426 aa12.48□□□□□ -0.41
SMG9-202ENST00000594081 PLEKHG3A1L390 1219 aa12.48□□□□□ -0.41
SMG9-202ENST00000594081 DDB1Q16531 1140 aa12.48□□□□□ -0.41
SMG9-202ENST00000594081 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
SMG9-202ENST00000594081 AATKQ6ZMQ8 1374 aa12.47□□□□□ -0.41
SMG9-202ENST00000594081 RAB3GAP2Q9H2M9 1393 aa12.47□□□□□ -0.41
SMG9-202ENST00000594081 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
SMG9-202ENST00000594081 FHDC1Q9C0D6 1143 aaPredicted RBP12.47□□□□□ -0.41
SMG9-202ENST00000594081 RGPD5Q99666 1765 aa12.47□□□□□ -0.41
SMG9-202ENST00000594081 PROM2Q8N271 834 aa12.46□□□□□ -0.41
SMG9-202ENST00000594081 ATF5Q9Y2D1 282 aaPredicted RBP12.46□□□□□ -0.41
SMG9-202ENST00000594081 USP6P35125 1406 aa12.45□□□□□ -0.42
SMG9-202ENST00000594081 CPSF1Q10570 1443 aaKnown RBP12.45□□□□□ -0.42
SMG9-202ENST00000594081 BRD4O60885 1362 aaPredicted RBP12.45□□□□□ -0.42
SMG9-202ENST00000594081 TRPM1Q7Z4N2 1603 aa12.45□□□□□ -0.42
SMG9-202ENST00000594081 TOM1L2Q6ZVM7 507 aa12.45□□□□□ -0.42
SMG9-202ENST00000594081 STAC3Q96MF2 364 aa12.45□□□□□ -0.42
SMG9-202ENST00000594081 SYT17Q9BSW7 474 aa12.45□□□□□ -0.42
SMG9-202ENST00000594081 STK32BQ9NY57 414 aa12.45□□□□□ -0.42
SMG9-202ENST00000594081 WDR17Q8IZU2 1322 aa12.44□□□□□ -0.42
SMG9-202ENST00000594081 C1QTNF8P60827 252 aa12.44□□□□□ -0.42
SMG9-202ENST00000594081 MARCH10Q8NA82 808 aaPredicted RBP12.44□□□□□ -0.42
SMG9-202ENST00000594081 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
SMG9-202ENST00000594081 ABCC6O95255 1503 aa12.43□□□□□ -0.42
SMG9-202ENST00000594081 SLC15A2Q16348 729 aa12.43□□□□□ -0.42
SMG9-202ENST00000594081 TXNRD1Q16881 649 aa12.43□□□□□ -0.42
SMG9-202ENST00000594081 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
SMG9-202ENST00000594081 MTFR1LQ9H019 292 aa12.43□□□□□ -0.42
SMG9-202ENST00000594081 SRPK2P78362 688 aaKnown RBP12.42□□□□□ -0.42
SMG9-202ENST00000594081 CDCA7Q9BWT1 371 aaPredicted RBP12.42□□□□□ -0.42
SMG9-202ENST00000594081 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
SMG9-202ENST00000594081 BTAF1O14981 1849 aa12.41□□□□□ -0.42
SMG9-202ENST00000594081 NLRP6P59044 892 aa12.41□□□□□ -0.42
SMG9-202ENST00000594081 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.42
SMG9-202ENST00000594081 SHANK3Q9BYB0 1731 aa12.4□□□□□ -0.42
SMG9-202ENST00000594081 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
SMG9-202ENST00000594081 NFAT5O94916 1531 aa12.4□□□□□ -0.42
SMG9-202ENST00000594081 ARXQ96QS3 562 aa12.39□□□□□ -0.43
SMG9-202ENST00000594081 CABP2Q9NPB3 220 aa12.39□□□□□ -0.43
SMG9-202ENST00000594081 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
SMG9-202ENST00000594081 CENPJQ9HC77 1338 aaPredicted RBP12.38□□□□□ -0.43
SMG9-202ENST00000594081 IFFO2Q5TF58 517 aa12.38□□□□□ -0.43
SMG9-202ENST00000594081 TUBGCP6Q96RT7 1819 aa12.38□□□□□ -0.43
SMG9-202ENST00000594081 GIGYF1O75420 1035 aaPredicted RBP12.37□□□□□ -0.43
SMG9-202ENST00000594081 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
SMG9-202ENST00000594081 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
SMG9-202ENST00000594081 CCDC7Q96M83 1385 aa12.37□□□□□ -0.43
SMG9-202ENST00000594081 ARHGEF25Q86VW2 580 aa12.36□□□□□ -0.43
SMG9-202ENST00000594081 CABP1Q9NZU7 370 aa12.36□□□□□ -0.43
SMG9-202ENST00000594081 LTN1O94822 1766 aa12.35□□□□□ -0.43
SMG9-202ENST00000594081 USP54Q70EL1 1684 aa12.35□□□□□ -0.43
SMG9-202ENST00000594081 MON2Q7Z3U7 1717 aa12.35□□□□□ -0.43
SMG9-202ENST00000594081 EXOC5O00471 708 aa12.35□□□□□ -0.43
SMG9-202ENST00000594081 SOX12O15370 315 aa12.35□□□□□ -0.43
SMG9-202ENST00000594081 NBPF1Q3BBV0 1214 aa12.35□□□□□ -0.43
SMG9-202ENST00000594081 GPR162Q16538 588 aa12.34□□□□□ -0.43
SMG9-202ENST00000594081 ZNF827Q17R98 1081 aa12.34□□□□□ -0.43
SMG9-202ENST00000594081 KCNH5Q8NCM2 988 aa12.34□□□□□ -0.43
SMG9-202ENST00000594081 ACSBG1Q96GR2 724 aa12.34□□□□□ -0.43
SMG9-202ENST00000594081 KLHL34Q8N239 644 aa12.33□□□□□ -0.44
SMG9-202ENST00000594081 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
SMG9-202ENST00000594081 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
SMG9-202ENST00000594081 PELP1Q8IZL8 1130 aaKnown RBP12.31□□□□□ -0.44
SMG9-202ENST00000594081 ERBB3P21860 1342 aa12.31□□□□□ -0.44
SMG9-202ENST00000594081 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
SMG9-202ENST00000594081 GOLGB1Q14789 3259 aaKnown RBP12.31□□□□□ -0.44
SMG9-202ENST00000594081 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
SMG9-202ENST00000594081 LY75O60449 1722 aa12.3□□□□□ -0.44
SMG9-202ENST00000594081 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
SMG9-202ENST00000594081 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
SMG9-202ENST00000594081 POLD1P28340 1107 aa12.29□□□□□ -0.44
SMG9-202ENST00000594081 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
SMG9-202ENST00000594081 PNPLA7Q6ZV29 1317 aa12.29□□□□□ -0.44
SMG9-202ENST00000594081 CEP350Q5VT06 3117 aa12.28□□□□□ -0.44
SMG9-202ENST00000594081 NLGN2Q8NFZ4 835 aa12.28□□□□□ -0.44
SMG9-202ENST00000594081 SLC16A10Q8TF71 515 aa12.28□□□□□ -0.44
SMG9-202ENST00000594081 KTN1Q86UP2 1357 aaKnown RBP12.28□□□□□ -0.44
SMG9-202ENST00000594081 KAT6BQ8WYB5 2073 aa12.28□□□□□ -0.44
SMG9-202ENST00000594081 IL2RBP14784 551 aa12.27□□□□□ -0.45
SMG9-202ENST00000594081 NLRP2Q9NX02 1062 aa12.27□□□□□ -0.45
SMG9-202ENST00000594081 SLC27A3Q5K4L6 730 aa12.26□□□□□ -0.45
SMG9-202ENST00000594081 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
SMG9-202ENST00000594081 ATP10DQ9P241 1426 aa12.26□□□□□ -0.45
SMG9-202ENST00000594081 YBX3P16989 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMG9-202ENST00000594081 USP31Q70CQ4 1352 aa12.25□□□□□ -0.45
SMG9-202ENST00000594081 C5P01031 1676 aa12.23□□□□□ -0.45
SMG9-202ENST00000594081 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
SMG9-202ENST00000594081 NSD2O96028 1365 aa12.23□□□□□ -0.45
SMG9-202ENST00000594081 ANKRD24Q8TF21 1146 aa12.23□□□□□ -0.45
SMG9-202ENST00000594081 TFCP2L1Q9NZI6 479 aa12.23□□□□□ -0.45
SMG9-202ENST00000594081 ADCY9O60503 1353 aa12.22□□□□□ -0.45
SMG9-202ENST00000594081 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
SMG9-202ENST00000594081 GRIN3BO60391 1043 aa12.22□□□□□ -0.45
SMG9-202ENST00000594081 KCNQ4P56696 695 aa12.22□□□□□ -0.45
SMG9-202ENST00000594081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMG9-202ENST00000594081 SBNO2Q9Y2G9 1366 aa12.21□□□□□ -0.45
SMG9-202ENST00000594081 NME9Q86XW9 330 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms