RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 A0A1W2PP64 1363 aa16.85■□□□□ 0.29
SOD3-202ENST00000593742 TOM1L2Q6ZVM7 507 aa16.84■□□□□ 0.29
SOD3-202ENST00000593742 CCER1Q8TC90 406 aaPredicted RBP16.84■□□□□ 0.29
SOD3-202ENST00000593742 TERF2IPQ9NYB0 399 aa16.84■□□□□ 0.29
SOD3-202ENST00000593742 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
SOD3-202ENST00000593742 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
SOD3-202ENST00000593742 PDE3BQ13370 1112 aa16.83■□□□□ 0.28
SOD3-202ENST00000593742 CRB1P82279 1406 aa16.82■□□□□ 0.28
SOD3-202ENST00000593742 BARGINQ6ZT62 677 aa16.82■□□□□ 0.28
SOD3-202ENST00000593742 AXIN2Q9Y2T1 843 aa16.82■□□□□ 0.28
SOD3-202ENST00000593742 TMF1P82094 1093 aa16.81■□□□□ 0.28
SOD3-202ENST00000593742 ARHGEF25Q86VW2 580 aa16.81■□□□□ 0.28
SOD3-202ENST00000593742 NFAT5O94916 1531 aa16.8■□□□□ 0.28
SOD3-202ENST00000593742 EDC4Q6P2E9 1401 aaKnown RBP16.8■□□□□ 0.28
SOD3-202ENST00000593742 COL18A1P39060 1754 aa16.8■□□□□ 0.28
SOD3-202ENST00000593742 RGPD5Q99666 1765 aa16.8■□□□□ 0.28
SOD3-202ENST00000593742 CLSPNQ9HAW4 1339 aa16.8■□□□□ 0.28
SOD3-202ENST00000593742 BAG6P46379 1132 aa16.8■□□□□ 0.28
SOD3-202ENST00000593742 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
SOD3-202ENST00000593742 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
SOD3-202ENST00000593742 THRAP3Q9Y2W1 955 aaKnown RBP16.79■□□□□ 0.28
SOD3-202ENST00000593742 USP31Q70CQ4 1352 aa16.78■□□□□ 0.28
SOD3-202ENST00000593742 WDR17Q8IZU2 1322 aa16.78■□□□□ 0.28
SOD3-202ENST00000593742 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
SOD3-202ENST00000593742 TRIM37O94972 964 aa16.78■□□□□ 0.28
SOD3-202ENST00000593742 RGPD1P0DJD0 1748 aa16.78■□□□□ 0.28
SOD3-202ENST00000593742 NINLQ9Y2I6 1382 aa16.77■□□□□ 0.28
SOD3-202ENST00000593742 EN1Q05925 392 aaPredicted RBP16.77■□□□□ 0.28
SOD3-202ENST00000593742 FAM196AQ6ZSG2 479 aa16.77■□□□□ 0.28
SOD3-202ENST00000593742 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
SOD3-202ENST00000593742 LTN1O94822 1766 aa16.76■□□□□ 0.27
SOD3-202ENST00000593742 SRCAPQ6ZRS2 3230 aa16.75■□□□□ 0.27
SOD3-202ENST00000593742 PARP4Q9UKK3 1724 aaKnown RBP16.75■□□□□ 0.27
SOD3-202ENST00000593742 USP54Q70EL1 1684 aa16.75■□□□□ 0.27
SOD3-202ENST00000593742 TNS1Q9HBL0 1735 aaKnown RBP16.74■□□□□ 0.27
SOD3-202ENST00000593742 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
SOD3-202ENST00000593742 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
SOD3-202ENST00000593742 DDB1Q16531 1140 aa16.74■□□□□ 0.27
SOD3-202ENST00000593742 POLR3GLQ9BT43 218 aa16.74■□□□□ 0.27
SOD3-202ENST00000593742 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
SOD3-202ENST00000593742 LRRC37A3O60309 1634 aa16.74■□□□□ 0.27
SOD3-202ENST00000593742 COG3Q96JB2 828 aa16.73■□□□□ 0.27
SOD3-202ENST00000593742 APBA3O96018 575 aa16.72■□□□□ 0.27
SOD3-202ENST00000593742 CDCA8Q53HL2 280 aa16.72■□□□□ 0.27
SOD3-202ENST00000593742 CARD10Q9BWT7 1032 aa16.72■□□□□ 0.27
SOD3-202ENST00000593742 NLRP2Q9NX02 1062 aa16.72■□□□□ 0.27
SOD3-202ENST00000593742 WNK3Q9BYP7 1800 aa16.72■□□□□ 0.27
SOD3-202ENST00000593742 PSDA5PKW4 1024 aaPredicted RBP16.71■□□□□ 0.27
SOD3-202ENST00000593742 EZH2Q15910 746 aaKnown RBP16.71■□□□□ 0.27
SOD3-202ENST00000593742 LTV1Q96GA3 475 aaPredicted RBP16.71■□□□□ 0.27
SOD3-202ENST00000593742 ABCC6O95255 1503 aa16.7■□□□□ 0.26
SOD3-202ENST00000593742 FBLN1P23142 703 aa16.7■□□□□ 0.26
SOD3-202ENST00000593742 ANKRD24Q8TF21 1146 aa16.7■□□□□ 0.26
SOD3-202ENST00000593742 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
SOD3-202ENST00000593742 OVOS2A0A0G2JMS6 1433 aa16.7■□□□□ 0.26
SOD3-202ENST00000593742 ERBB3P21860 1342 aa16.7■□□□□ 0.26
SOD3-202ENST00000593742 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
SOD3-202ENST00000593742 CDCA7Q9BWT1 371 aaPredicted RBP16.68■□□□□ 0.26
SOD3-202ENST00000593742 AMPHP49418 695 aa16.67■□□□□ 0.26
SOD3-202ENST00000593742 DISP2A7MBM2 1401 aa16.67■□□□□ 0.26
SOD3-202ENST00000593742 MYOM1P52179 1685 aa16.66■□□□□ 0.26
SOD3-202ENST00000593742 EXOC5O00471 708 aa16.66■□□□□ 0.26
SOD3-202ENST00000593742 MARCH10Q8NA82 808 aaPredicted RBP16.66■□□□□ 0.26
SOD3-202ENST00000593742 MAP3K19Q56UN5 1328 aa16.66■□□□□ 0.26
SOD3-202ENST00000593742 FYB1O15117 783 aa16.65■□□□□ 0.26
SOD3-202ENST00000593742 R3HDM1Q15032 1099 aaKnown RBP16.65■□□□□ 0.26
SOD3-202ENST00000593742 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
SOD3-202ENST00000593742 IP6K1Q92551 441 aa16.65■□□□□ 0.26
SOD3-202ENST00000593742 CAMKK2Q96RR4 588 aa16.65■□□□□ 0.26
SOD3-202ENST00000593742 KIF20BQ96Q89 1820 aa16.65■□□□□ 0.26
SOD3-202ENST00000593742 PEAK1Q9H792 1746 aa16.65■□□□□ 0.26
SOD3-202ENST00000593742 NSD3Q9BZ95 1437 aa16.64■□□□□ 0.25
SOD3-202ENST00000593742 HSPA5P11021 654 aaKnown RBP16.64■□□□□ 0.25
SOD3-202ENST00000593742 EIF4G2P78344 907 aaKnown RBP eCLIP16.64■□□□□ 0.25
SOD3-202ENST00000593742 IL2RBP14784 551 aa16.63■□□□□ 0.25
SOD3-202ENST00000593742 HOXC9P31274 260 aa16.63■□□□□ 0.25
SOD3-202ENST00000593742 U3KPZ7 1027 aaPredicted RBP16.63■□□□□ 0.25
SOD3-202ENST00000593742 TNS2Q63HR2 1409 aa16.62■□□□□ 0.25
SOD3-202ENST00000593742 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
SOD3-202ENST00000593742 PTF1AQ7RTS3 328 aa16.62■□□□□ 0.25
SOD3-202ENST00000593742 CARD14Q9BXL6 1004 aa16.62■□□□□ 0.25
SOD3-202ENST00000593742 SBF2Q86WG5 1849 aa16.61■□□□□ 0.25
SOD3-202ENST00000593742 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
SOD3-202ENST00000593742 PARD3Q8TEW0 1356 aa16.61■□□□□ 0.25
SOD3-202ENST00000593742 ACSBG1Q96GR2 724 aa16.6■□□□□ 0.25
SOD3-202ENST00000593742 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
SOD3-202ENST00000593742 RREB1Q92766 1687 aa16.59■□□□□ 0.25
SOD3-202ENST00000593742 NUP188Q5SRE5 1749 aa16.59■□□□□ 0.25
SOD3-202ENST00000593742 ZBTB22O15209 634 aa16.58■□□□□ 0.24
SOD3-202ENST00000593742 RTL1A6NKG5 1358 aa16.58■□□□□ 0.24
SOD3-202ENST00000593742 FAM208AQ9UK61 1670 aaKnown RBP16.58■□□□□ 0.24
SOD3-202ENST00000593742 RGPD2P0DJD1 1756 aa16.58■□□□□ 0.24
SOD3-202ENST00000593742 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
SOD3-202ENST00000593742 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
SOD3-202ENST00000593742 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
SOD3-202ENST00000593742 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
SOD3-202ENST00000593742 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
SOD3-202ENST00000593742 CGNL1Q0VF96 1302 aa16.56■□□□□ 0.24
SOD3-202ENST00000593742 KCNQ2O43526 872 aa16.56■□□□□ 0.24
SOD3-202ENST00000593742 HSP90AB2PQ58FF8 381 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms