RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
SRRM1-221ENST00000593639 SLC15A2Q16348 729 aa13.47□□□□□ -0.25
SRRM1-221ENST00000593639 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
SRRM1-221ENST00000593639 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
SRRM1-221ENST00000593639 STK32BQ9NY57 414 aa13.47□□□□□ -0.25
SRRM1-221ENST00000593639 AXIN2Q9Y2T1 843 aa13.47□□□□□ -0.25
SRRM1-221ENST00000593639 LRRC37A3O60309 1634 aa13.46□□□□□ -0.25
SRRM1-221ENST00000593639 NLRP6P59044 892 aa13.46□□□□□ -0.25
SRRM1-221ENST00000593639 C1QTNF8P60827 252 aa13.46□□□□□ -0.25
SRRM1-221ENST00000593639 SRPK2P78362 688 aaKnown RBP13.46□□□□□ -0.25
SRRM1-221ENST00000593639 MYOM1P52179 1685 aa13.46□□□□□ -0.26
SRRM1-221ENST00000593639 WDR17Q8IZU2 1322 aa13.45□□□□□ -0.26
SRRM1-221ENST00000593639 CEP350Q5VT06 3117 aa13.45□□□□□ -0.26
SRRM1-221ENST00000593639 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
SRRM1-221ENST00000593639 MTFR1LQ9H019 292 aa13.45□□□□□ -0.26
SRRM1-221ENST00000593639 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
SRRM1-221ENST00000593639 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
SRRM1-221ENST00000593639 CDCA7Q9BWT1 371 aaPredicted RBP13.44□□□□□ -0.26
SRRM1-221ENST00000593639 CABP1Q9NZU7 370 aa13.44□□□□□ -0.26
SRRM1-221ENST00000593639 USP6P35125 1406 aa13.44□□□□□ -0.26
SRRM1-221ENST00000593639 BRD4O60885 1362 aaPredicted RBP13.44□□□□□ -0.26
SRRM1-221ENST00000593639 SLIT3O75094 1523 aa13.44□□□□□ -0.26
SRRM1-221ENST00000593639 ARHGEF25Q86VW2 580 aa13.42□□□□□ -0.26
SRRM1-221ENST00000593639 CARD10Q9BWT7 1032 aa13.42□□□□□ -0.26
SRRM1-221ENST00000593639 ARXQ96QS3 562 aa13.41□□□□□ -0.26
SRRM1-221ENST00000593639 CENPJQ9HC77 1338 aaPredicted RBP13.4□□□□□ -0.26
SRRM1-221ENST00000593639 CPSF1Q10570 1443 aaKnown RBP13.4□□□□□ -0.26
SRRM1-221ENST00000593639 EXOC5O00471 708 aa13.4□□□□□ -0.26
SRRM1-221ENST00000593639 CSB-PGBD3P0DP91 1061 aa13.4□□□□□ -0.26
SRRM1-221ENST00000593639 SOX12O15370 315 aa13.39□□□□□ -0.27
SRRM1-221ENST00000593639 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
SRRM1-221ENST00000593639 MAP3K5Q99683 1374 aa13.38□□□□□ -0.27
SRRM1-221ENST00000593639 ZNF827Q17R98 1081 aa13.38□□□□□ -0.27
SRRM1-221ENST00000593639 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
SRRM1-221ENST00000593639 ACSBG1Q96GR2 724 aa13.38□□□□□ -0.27
SRRM1-221ENST00000593639 COL18A1P39060 1754 aa13.37□□□□□ -0.27
SRRM1-221ENST00000593639 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
SRRM1-221ENST00000593639 TNS2Q63HR2 1409 aa13.37□□□□□ -0.27
SRRM1-221ENST00000593639 GPR162Q16538 588 aa13.36□□□□□ -0.27
SRRM1-221ENST00000593639 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
SRRM1-221ENST00000593639 CCDC7Q96M83 1385 aa13.35□□□□□ -0.27
SRRM1-221ENST00000593639 GIGYF1O75420 1035 aaPredicted RBP13.35□□□□□ -0.27
SRRM1-221ENST00000593639 LRRC4BQ9NT99 713 aa13.35□□□□□ -0.27
SRRM1-221ENST00000593639 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
SRRM1-221ENST00000593639 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
SRRM1-221ENST00000593639 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
SRRM1-221ENST00000593639 AKT1S1Q96B36 256 aa13.32□□□□□ -0.28
SRRM1-221ENST00000593639 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
SRRM1-221ENST00000593639 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
SRRM1-221ENST00000593639 KIAA1210Q9ULL0 1709 aa13.31□□□□□ -0.28
SRRM1-221ENST00000593639 NFAT5O94916 1531 aa13.31□□□□□ -0.28
SRRM1-221ENST00000593639 PELP1Q8IZL8 1130 aaKnown RBP13.31□□□□□ -0.28
SRRM1-221ENST00000593639 ERBB3P21860 1342 aa13.31□□□□□ -0.28
SRRM1-221ENST00000593639 EVC2Q86UK5 1308 aa13.31□□□□□ -0.28
SRRM1-221ENST00000593639 TTC21AQ8NDW8 1320 aa13.31□□□□□ -0.28
SRRM1-221ENST00000593639 TRPM1Q7Z4N2 1603 aa13.31□□□□□ -0.28
SRRM1-221ENST00000593639 ABCC6O95255 1503 aa13.3□□□□□ -0.28
SRRM1-221ENST00000593639 IL2RBP14784 551 aa13.3□□□□□ -0.28
SRRM1-221ENST00000593639 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
SRRM1-221ENST00000593639 NLRP2Q9NX02 1062 aa13.3□□□□□ -0.28
SRRM1-221ENST00000593639 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
SRRM1-221ENST00000593639 NHSQ6T4R5 1651 aa13.29□□□□□ -0.28
SRRM1-221ENST00000593639 POLD1P28340 1107 aa13.29□□□□□ -0.28
SRRM1-221ENST00000593639 SLC16A10Q8TF71 515 aa13.29□□□□□ -0.28
SRRM1-221ENST00000593639 PNPLA7Q6ZV29 1317 aa13.29□□□□□ -0.28
SRRM1-221ENST00000593639 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
SRRM1-221ENST00000593639 KCNQ4P56696 695 aa13.27□□□□□ -0.29
SRRM1-221ENST00000593639 SLC27A3Q5K4L6 730 aa13.27□□□□□ -0.29
SRRM1-221ENST00000593639 QRICH2Q9H0J4 1663 aa13.27□□□□□ -0.29
SRRM1-221ENST00000593639 CHD4Q14839 1912 aa13.26□□□□□ -0.29
SRRM1-221ENST00000593639 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
SRRM1-221ENST00000593639 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
SRRM1-221ENST00000593639 USP31Q70CQ4 1352 aa13.25□□□□□ -0.29
SRRM1-221ENST00000593639 NME9Q86XW9 330 aa13.25□□□□□ -0.29
SRRM1-221ENST00000593639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRRM1-221ENST00000593639 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
SRRM1-221ENST00000593639 SHANK3Q9BYB0 1731 aa13.25□□□□□ -0.29
SRRM1-221ENST00000593639 DDX54Q8TDD1 881 aaKnown RBP13.24□□□□□ -0.29
SRRM1-221ENST00000593639 RGPD5Q99666 1765 aa13.23□□□□□ -0.29
SRRM1-221ENST00000593639 GRIN3BO60391 1043 aa13.23□□□□□ -0.29
SRRM1-221ENST00000593639 L3MBTL2Q969R5 705 aa13.23□□□□□ -0.29
SRRM1-221ENST00000593639 SBNO2Q9Y2G9 1366 aa13.22□□□□□ -0.29
SRRM1-221ENST00000593639 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
SRRM1-221ENST00000593639 BTAF1O14981 1849 aa13.22□□□□□ -0.29
SRRM1-221ENST00000593639 ATP10DQ9P241 1426 aa13.22□□□□□ -0.29
SRRM1-221ENST00000593639 SYTL4Q96C24 671 aaPredicted RBP13.21□□□□□ -0.29
SRRM1-221ENST00000593639 NSD2O96028 1365 aa13.2□□□□□ -0.3
SRRM1-221ENST00000593639 COL23A1Q86Y22 540 aaPredicted RBP13.2□□□□□ -0.3
SRRM1-221ENST00000593639 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
SRRM1-221ENST00000593639 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
SRRM1-221ENST00000593639 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
SRRM1-221ENST00000593639 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
SRRM1-221ENST00000593639 MSH5O43196 834 aa13.18□□□□□ -0.3
SRRM1-221ENST00000593639 IP6K1Q92551 441 aa13.18□□□□□ -0.3
SRRM1-221ENST00000593639 LTV1Q96GA3 475 aaPredicted RBP13.18□□□□□ -0.3
SRRM1-221ENST00000593639 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
SRRM1-221ENST00000593639 COL24A1Q17RW2 1714 aa13.17□□□□□ -0.3
SRRM1-221ENST00000593639 HSPA6P17066 643 aa13.17□□□□□ -0.3
SRRM1-221ENST00000593639 GPBP1L1Q9HC44 474 aaPredicted RBP13.17□□□□□ -0.3
SRRM1-221ENST00000593639 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms