RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 ARHGEF25Q86VW2 580 aa29.1■■■□□ 2.25
TRIM47-207ENST00000593089 WNK3Q9BYP7 1800 aa29.09■■■□□ 2.25
TRIM47-207ENST00000593089 WDR17Q8IZU2 1322 aa29.09■■■□□ 2.25
TRIM47-207ENST00000593089 PARD3Q8TEW0 1356 aa29.09■■■□□ 2.25
TRIM47-207ENST00000593089 RREB1Q92766 1687 aa29.09■■■□□ 2.25
TRIM47-207ENST00000593089 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.07■■■□□ 2.24
TRIM47-207ENST00000593089 NFAT5O94916 1531 aa29.06■■■□□ 2.24
TRIM47-207ENST00000593089 DDB1Q16531 1140 aa29.06■■■□□ 2.24
TRIM47-207ENST00000593089 TMC1Q8TDI8 760 aa29.06■■■□□ 2.24
TRIM47-207ENST00000593089 NUP188Q5SRE5 1749 aa29.06■■■□□ 2.24
TRIM47-207ENST00000593089 PEAK1Q9H792 1746 aa29.06■■■□□ 2.24
TRIM47-207ENST00000593089 OVOS2A0A0G2JMS6 1433 aa29.05■■■□□ 2.24
TRIM47-207ENST00000593089 OVOS2A0A0J9YW53 1432 aa29.05■■■□□ 2.24
TRIM47-207ENST00000593089 OVOS2Q6IE36 1432 aa29.05■■■□□ 2.24
TRIM47-207ENST00000593089 CSB-PGBD3P0DP91 1061 aa29.05■■■□□ 2.24
TRIM47-207ENST00000593089 CD163L1Q9NR16 1453 aa29.04■■■□□ 2.24
TRIM47-207ENST00000593089 C11orf95C9JLR9 678 aaPredicted RBP29.03■■■□□ 2.24
TRIM47-207ENST00000593089 SBF2Q86WG5 1849 aa29.01■■■□□ 2.24
TRIM47-207ENST00000593089 NME9Q86XW9 330 aa29■■■□□ 2.23
TRIM47-207ENST00000593089 SLC12A5Q9H2X9 1139 aa29■■■□□ 2.23
TRIM47-207ENST00000593089 USP54Q70EL1 1684 aa28.99■■■□□ 2.23
TRIM47-207ENST00000593089 HDGFL2Q7Z4V5 671 aaPredicted RBP28.99■■■□□ 2.23
TRIM47-207ENST00000593089 CDCA7Q9BWT1 371 aaPredicted RBP28.99■■■□□ 2.23
TRIM47-207ENST00000593089 CARD10Q9BWT7 1032 aa28.99■■■□□ 2.23
TRIM47-207ENST00000593089 USP31Q70CQ4 1352 aa28.99■■■□□ 2.23
TRIM47-207ENST00000593089 NBPF14Q5TI25 921 aa28.97■■■□□ 2.23
TRIM47-207ENST00000593089 ABCC6O95255 1503 aa28.97■■■□□ 2.23
TRIM47-207ENST00000593089 MARCH10Q8NA82 808 aaPredicted RBP28.96■■■□□ 2.23
TRIM47-207ENST00000593089 LTN1O94822 1766 aa28.96■■■□□ 2.23
TRIM47-207ENST00000593089 EDC4Q6P2E9 1401 aaKnown RBP28.94■■■□□ 2.22
TRIM47-207ENST00000593089 A0A1W2PP64 1363 aa28.93■■■□□ 2.22
TRIM47-207ENST00000593089 CCDC7Q96M83 1385 aa28.93■■■□□ 2.22
TRIM47-207ENST00000593089 TERF2IPQ9NYB0 399 aa28.93■■■□□ 2.22
TRIM47-207ENST00000593089 PTF1AQ7RTS3 328 aa28.92■■■□□ 2.22
TRIM47-207ENST00000593089 RGPD3A6NKT7 1758 aaPredicted RBP28.92■■■□□ 2.22
TRIM47-207ENST00000593089 RGPD4Q7Z3J3 1758 aa28.92■■■□□ 2.22
TRIM47-207ENST00000593089 BCL11BQ9C0K0 894 aaPredicted RBP28.91■■■□□ 2.22
TRIM47-207ENST00000593089 EXOC5O00471 708 aa28.9■■■□□ 2.22
TRIM47-207ENST00000593089 ST20-MTHFSA0A0A6YYL1 179 aa28.89■■■□□ 2.22
TRIM47-207ENST00000593089 PLSCR1O15162 318 aa28.89■■■□□ 2.22
TRIM47-207ENST00000593089 PUS7Q96PZ0 661 aaKnown RBP28.89■■■□□ 2.22
TRIM47-207ENST00000593089 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
TRIM47-207ENST00000593089 TESK2Q96S53 571 aa28.88■■■□□ 2.21
TRIM47-207ENST00000593089 ERBB3P21860 1342 aa28.88■■■□□ 2.21
TRIM47-207ENST00000593089 BCL9O00512 1426 aa28.87■■■□□ 2.21
TRIM47-207ENST00000593089 NLRP2Q9NX02 1062 aa28.87■■■□□ 2.21
TRIM47-207ENST00000593089 TNS2Q63HR2 1409 aa28.86■■■□□ 2.21
TRIM47-207ENST00000593089 ANKRD24Q8TF21 1146 aa28.84■■■□□ 2.21
TRIM47-207ENST00000593089 NINLQ9Y2I6 1382 aa28.82■■■□□ 2.2
TRIM47-207ENST00000593089 ANO8Q9HCE9 1232 aaPredicted RBP28.8■■■□□ 2.2
TRIM47-207ENST00000593089 IL2RBP14784 551 aa28.79■■■□□ 2.2
TRIM47-207ENST00000593089 SLC24A1O60721 1099 aa28.78■■■□□ 2.2
TRIM47-207ENST00000593089 PROM2Q8N271 834 aa28.78■■■□□ 2.2
TRIM47-207ENST00000593089 KCNQ2O43526 872 aa28.77■■■□□ 2.2
TRIM47-207ENST00000593089 SPON1Q9HCB6 807 aa28.77■■■□□ 2.2
TRIM47-207ENST00000593089 NHSQ6T4R5 1651 aa28.77■■■□□ 2.2
TRIM47-207ENST00000593089 ACSBG1Q96GR2 724 aa28.76■■■□□ 2.19
TRIM47-207ENST00000593089 COG3Q96JB2 828 aa28.76■■■□□ 2.19
TRIM47-207ENST00000593089 IP6K1Q92551 441 aa28.75■■■□□ 2.19
TRIM47-207ENST00000593089 LTV1Q96GA3 475 aaPredicted RBP28.75■■■□□ 2.19
TRIM47-207ENST00000593089 TXNRD1Q16881 649 aa28.74■■■□□ 2.19
TRIM47-207ENST00000593089 PPP1R1BQ9UD71 204 aaPredicted RBP28.73■■■□□ 2.19
TRIM47-207ENST00000593089 FAM208AQ9UK61 1670 aaKnown RBP28.73■■■□□ 2.19
TRIM47-207ENST00000593089 USP47Q96K76 1375 aa28.73■■■□□ 2.19
TRIM47-207ENST00000593089 CASZ1Q86V15 1759 aa28.72■■■□□ 2.19
TRIM47-207ENST00000593089 ANKRD36BQ8N2N9 1353 aa28.72■■■□□ 2.19
TRIM47-207ENST00000593089 FBLN1P23142 703 aa28.71■■■□□ 2.19
TRIM47-207ENST00000593089 TMF1P82094 1093 aa28.71■■■□□ 2.19
TRIM47-207ENST00000593089 MAP3K19Q56UN5 1328 aa28.69■■■□□ 2.18
TRIM47-207ENST00000593089 PDGFDQ9GZP0 370 aaPredicted RBP28.69■■■□□ 2.18
TRIM47-207ENST00000593089 AMPHP49418 695 aa28.68■■■□□ 2.18
TRIM47-207ENST00000593089 STK32BQ9NY57 414 aa28.68■■■□□ 2.18
TRIM47-207ENST00000593089 KAT6BQ8WYB5 2073 aa28.68■■■□□ 2.18
TRIM47-207ENST00000593089 BTAF1O14981 1849 aa28.67■■■□□ 2.18
TRIM47-207ENST00000593089 HOXC9P31274 260 aa28.67■■■□□ 2.18
TRIM47-207ENST00000593089 RGPD2P0DJD1 1756 aa28.65■■■□□ 2.18
TRIM47-207ENST00000593089 SLC15A2Q16348 729 aa28.64■■■□□ 2.18
TRIM47-207ENST00000593089 DDX54Q8TDD1 881 aaKnown RBP28.64■■■□□ 2.18
TRIM47-207ENST00000593089 GGNBP2Q9H3C7 697 aa28.64■■■□□ 2.18
TRIM47-207ENST00000593089 ZBTB7AO95365 584 aa28.63■■■□□ 2.17
TRIM47-207ENST00000593089 FYB1O15117 783 aa28.62■■■□□ 2.17
TRIM47-207ENST00000593089 RRS1Q15050 365 aaKnown RBP28.61■■■□□ 2.17
TRIM47-207ENST00000593089 KIF20BQ96Q89 1820 aa28.6■■■□□ 2.17
TRIM47-207ENST00000593089 CDCA8Q53HL2 280 aa28.59■■■□□ 2.17
TRIM47-207ENST00000593089 RTL1A6NKG5 1358 aa28.59■■■□□ 2.17
TRIM47-207ENST00000593089 ATF5Q9Y2D1 282 aaPredicted RBP28.58■■■□□ 2.17
TRIM47-207ENST00000593089 PAPPAQ13219 1627 aa28.57■■■□□ 2.16
TRIM47-207ENST00000593089 MYOM1P52179 1685 aa28.57■■■□□ 2.16
TRIM47-207ENST00000593089 SHANK3Q9BYB0 1731 aa28.55■■■□□ 2.16
TRIM47-207ENST00000593089 MEGF6O75095 1541 aa28.55■■■□□ 2.16
TRIM47-207ENST00000593089 DOT1LQ8TEK3 1739 aa28.55■■■□□ 2.16
TRIM47-207ENST00000593089 PTGER2P43116 358 aa28.54■■■□□ 2.16
TRIM47-207ENST00000593089 ZCRB1Q8TBF4 217 aaKnown RBP28.53■■■□□ 2.16
TRIM47-207ENST00000593089 SYTL4Q96C24 671 aaPredicted RBP28.53■■■□□ 2.16
TRIM47-207ENST00000593089 SMG6Q86US8 1419 aaKnown RBP28.52■■■□□ 2.16
TRIM47-207ENST00000593089 NBPF6Q5VWK0 638 aa28.52■■■□□ 2.16
TRIM47-207ENST00000593089 USHBP1Q8N6Y0 703 aa28.52■■■□□ 2.16
TRIM47-207ENST00000593089 NBPF4Q96M43 638 aa28.52■■■□□ 2.16
TRIM47-207ENST00000593089 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
TRIM47-207ENST00000593089 LRRC4BQ9NT99 713 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms