RNA–Protein interactions for RNA: ENST00000592928.2

RAD51D-223, Transcript of RAD51 paralog D, human

TSL 1 (best)

Gene RAD51D, Length 207 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51D-223	ENST00000592928	DISP2	A7MBM2	1401 aa		13.59	□□□□□ -0.23
RAD51D-223	ENST00000592928	TCP11L2	Q8N4U5	519 aa		13.59	□□□□□ -0.23
RAD51D-223	ENST00000592928	LRRC37A3	O60309	1634 aa		13.59	□□□□□ -0.23
RAD51D-223	ENST00000592928	ANKRD36B	Q8N2N9	1353 aa		13.58	□□□□□ -0.23
RAD51D-223	ENST00000592928	SF3B2	Q13435	895 aa	Known RBP	13.58	□□□□□ -0.24
RAD51D-223	ENST00000592928	WDR17	Q8IZU2	1322 aa		13.58	□□□□□ -0.24
RAD51D-223	ENST00000592928	LTN1	O94822	1766 aa		13.58	□□□□□ -0.24
RAD51D-223	ENST00000592928	TMF1	P82094	1093 aa		13.57	□□□□□ -0.24
RAD51D-223	ENST00000592928	NME9	Q86XW9	330 aa		13.57	□□□□□ -0.24
RAD51D-223	ENST00000592928	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
RAD51D-223	ENST00000592928	USP35	Q9P2H5	1018 aa		13.57	□□□□□ -0.24
RAD51D-223	ENST00000592928	RGPD5	Q99666	1765 aa		13.57	□□□□□ -0.24
RAD51D-223	ENST00000592928	MYOM1	P52179	1685 aa		13.56	□□□□□ -0.24
RAD51D-223	ENST00000592928	ZBTB7C	A1YPR0	619 aa		13.55	□□□□□ -0.24
RAD51D-223	ENST00000592928	AXIN2	Q9Y2T1	843 aa		13.55	□□□□□ -0.24
RAD51D-223	ENST00000592928	PEAK1	Q9H792	1746 aa		13.55	□□□□□ -0.24
RAD51D-223	ENST00000592928	BAG6	P46379	1132 aa		13.54	□□□□□ -0.24
RAD51D-223	ENST00000592928	CDCA8	Q53HL2	280 aa		13.54	□□□□□ -0.24
RAD51D-223	ENST00000592928	FAM196A	Q6ZSG2	479 aa		13.54	□□□□□ -0.24
RAD51D-223	ENST00000592928	DEFB132	Q7Z7B7	95 aa		13.54	□□□□□ -0.24
RAD51D-223	ENST00000592928	ZRANB1	Q9UGI0	708 aa		13.54	□□□□□ -0.24
RAD51D-223	ENST00000592928	SOX12	O15370	315 aa		13.53	□□□□□ -0.24
RAD51D-223	ENST00000592928	TOM1L2	Q6ZVM7	507 aa		13.53	□□□□□ -0.24
RAD51D-223	ENST00000592928	CCDC7	Q96M83	1385 aa		13.53	□□□□□ -0.24
RAD51D-223	ENST00000592928	OVOS2	A0A0G2JMS6	1433 aa		13.53	□□□□□ -0.24
RAD51D-223	ENST00000592928	FAM208A	Q9UK61	1670 aa	Known RBP	13.53	□□□□□ -0.24
RAD51D-223	ENST00000592928	C11orf95	C9JLR9	678 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD51D-223	ENST00000592928	PDE3B	Q13370	1112 aa		13.52	□□□□□ -0.25
RAD51D-223	ENST00000592928	FAM182B	Q5T319	152 aa		13.52	□□□□□ -0.25
RAD51D-223	ENST00000592928	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.52	□□□□□ -0.25
RAD51D-223	ENST00000592928	CARD10	Q9BWT7	1032 aa		13.52	□□□□□ -0.25
RAD51D-223	ENST00000592928	ERBB3	P21860	1342 aa		13.52	□□□□□ -0.25
RAD51D-223	ENST00000592928	KIF20B	Q96Q89	1820 aa		13.51	□□□□□ -0.25
RAD51D-223	ENST00000592928	PARD3	Q8TEW0	1356 aa		13.51	□□□□□ -0.25
RAD51D-223	ENST00000592928	RREB1	Q92766	1687 aa		13.5	□□□□□ -0.25
RAD51D-223	ENST00000592928	BCL9	O00512	1426 aa		13.5	□□□□□ -0.25
RAD51D-223	ENST00000592928	TNS2	Q63HR2	1409 aa		13.5	□□□□□ -0.25
RAD51D-223	ENST00000592928	CCER1	Q8TC90	406 aa	Predicted RBP	13.5	□□□□□ -0.25
RAD51D-223	ENST00000592928	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.5	□□□□□ -0.25
RAD51D-223	ENST00000592928	RGPD4	Q7Z3J3	1758 aa		13.5	□□□□□ -0.25
RAD51D-223	ENST00000592928	CSB-PGBD3	P0DP91	1061 aa		13.49	□□□□□ -0.25
RAD51D-223	ENST00000592928	RTL1	A6NKG5	1358 aa		13.48	□□□□□ -0.25
RAD51D-223	ENST00000592928	DDB1	Q16531	1140 aa		13.48	□□□□□ -0.25
RAD51D-223	ENST00000592928	COG3	Q96JB2	828 aa		13.48	□□□□□ -0.25
RAD51D-223	ENST00000592928	SBF2	Q86WG5	1849 aa		13.48	□□□□□ -0.25
RAD51D-223	ENST00000592928	TRIM37	O94972	964 aa		13.47	□□□□□ -0.25
RAD51D-223	ENST00000592928	EN1	Q05925	392 aa	Predicted RBP	13.47	□□□□□ -0.25
RAD51D-223	ENST00000592928	IP6K1	Q92551	441 aa		13.46	□□□□□ -0.25
RAD51D-223	ENST00000592928	NUP188	Q5SRE5	1749 aa		13.46	□□□□□ -0.25
RAD51D-223	ENST00000592928	NSD3	Q9BZ95	1437 aa		13.46	□□□□□ -0.26
RAD51D-223	ENST00000592928	LRP5	O75197	1615 aa		13.46	□□□□□ -0.26
RAD51D-223	ENST00000592928	MAP3K19	Q56UN5	1328 aa		13.45	□□□□□ -0.26
RAD51D-223	ENST00000592928	FYB1	O15117	783 aa		13.45	□□□□□ -0.26
RAD51D-223	ENST00000592928	ANKRD24	Q8TF21	1146 aa		13.45	□□□□□ -0.26
RAD51D-223	ENST00000592928	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
RAD51D-223	ENST00000592928	CAMKK2	Q96RR4	588 aa		13.44	□□□□□ -0.26
RAD51D-223	ENST00000592928	ANKRD26	Q9UPS8	1709 aa		13.44	□□□□□ -0.26
RAD51D-223	ENST00000592928	KIF24	Q5T7B8	1368 aa		13.44	□□□□□ -0.26
RAD51D-223	ENST00000592928	APBA3	O96018	575 aa		13.43	□□□□□ -0.26
RAD51D-223	ENST00000592928	EZH2	Q15910	746 aa	Known RBP	13.43	□□□□□ -0.26
RAD51D-223	ENST00000592928	NHS	Q6T4R5	1651 aa		13.43	□□□□□ -0.26
RAD51D-223	ENST00000592928	HOXC9	P31274	260 aa		13.42	□□□□□ -0.26
RAD51D-223	ENST00000592928	MARCH10	Q8NA82	808 aa	Predicted RBP	13.42	□□□□□ -0.26
RAD51D-223	ENST00000592928	GGNBP2	Q9H3C7	697 aa		13.42	□□□□□ -0.26
RAD51D-223	ENST00000592928	NLRP2	Q9NX02	1062 aa		13.42	□□□□□ -0.26
RAD51D-223	ENST00000592928	SRCAP	Q6ZRS2	3230 aa		13.42	□□□□□ -0.26
RAD51D-223	ENST00000592928	EXOC5	O00471	708 aa		13.41	□□□□□ -0.26
RAD51D-223	ENST00000592928	IL2RB	P14784	551 aa		13.41	□□□□□ -0.26
RAD51D-223	ENST00000592928	CARD14	Q9BXL6	1004 aa		13.41	□□□□□ -0.26
RAD51D-223	ENST00000592928	HSPA5	P11021	654 aa	Known RBP	13.4	□□□□□ -0.26
RAD51D-223	ENST00000592928	AMPH	P49418	695 aa		13.4	□□□□□ -0.26
RAD51D-223	ENST00000592928	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.4	□□□□□ -0.26
RAD51D-223	ENST00000592928	SMG6	Q86US8	1419 aa	Known RBP	13.39	□□□□□ -0.27
RAD51D-223	ENST00000592928	INSR	P06213	1382 aa		13.39	□□□□□ -0.27
RAD51D-223	ENST00000592928	FLT4	P35916	1363 aa		13.39	□□□□□ -0.27
RAD51D-223	ENST00000592928	RGPD2	P0DJD1	1756 aa		13.39	□□□□□ -0.27
RAD51D-223	ENST00000592928	SHANK3	Q9BYB0	1731 aa		13.39	□□□□□ -0.27
RAD51D-223	ENST00000592928	CGNL1	Q0VF96	1302 aa		13.39	□□□□□ -0.27
RAD51D-223	ENST00000592928	PLSCR1	O15162	318 aa		13.38	□□□□□ -0.27
RAD51D-223	ENST00000592928	FBLN1	P23142	703 aa		13.38	□□□□□ -0.27
RAD51D-223	ENST00000592928	RRS1	Q15050	365 aa	Known RBP	13.38	□□□□□ -0.27
RAD51D-223	ENST00000592928	MEGF6	O75095	1541 aa		13.38	□□□□□ -0.27
RAD51D-223	ENST00000592928	PSD	A5PKW4	1024 aa	Predicted RBP	13.37	□□□□□ -0.27
RAD51D-223	ENST00000592928	LTV1	Q96GA3	475 aa	Predicted RBP	13.36	□□□□□ -0.27
RAD51D-223	ENST00000592928	NCAPD2	Q15021	1401 aa		13.36	□□□□□ -0.27
RAD51D-223	ENST00000592928	NSD2	O96028	1365 aa		13.35	□□□□□ -0.27
RAD51D-223	ENST00000592928	R3HDM1	Q15032	1099 aa	Known RBP	13.35	□□□□□ -0.27
RAD51D-223	ENST00000592928	BTAF1	O14981	1849 aa		13.34	□□□□□ -0.27
RAD51D-223	ENST00000592928	PTF1A	Q7RTS3	328 aa		13.34	□□□□□ -0.27
RAD51D-223	ENST00000592928	DOT1L	Q8TEK3	1739 aa		13.33	□□□□□ -0.27
RAD51D-223	ENST00000592928	NBPF14	Q5TI25	921 aa		13.33	□□□□□ -0.28
RAD51D-223	ENST00000592928	POLR3GL	Q9BT43	218 aa		13.33	□□□□□ -0.28
RAD51D-223	ENST00000592928	PAPPA	Q13219	1627 aa		13.32	□□□□□ -0.28
RAD51D-223	ENST00000592928	HSP90AB2P	Q58FF8	381 aa		13.32	□□□□□ -0.28
RAD51D-223	ENST00000592928	NBPF6	Q5VWK0	638 aa		13.32	□□□□□ -0.28
RAD51D-223	ENST00000592928	NBPF4	Q96M43	638 aa		13.32	□□□□□ -0.28
RAD51D-223	ENST00000592928	EMILIN1	Q9Y6C2	1016 aa		13.32	□□□□□ -0.28
RAD51D-223	ENST00000592928	PKD1L3	Q7Z443	1732 aa		13.32	□□□□□ -0.28
RAD51D-223	ENST00000592928	MAP2	P11137	1827 aa	Known RBP	13.32	□□□□□ -0.28
RAD51D-223	ENST00000592928	CASZ1	Q86V15	1759 aa		13.31	□□□□□ -0.28

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